Literature DB >> 26113243

Uncultivated thermophiles: current status and spotlight on 'Aigarchaeota'.

Brian P Hedlund1, Senthil K Murugapiran2, Timothy W Alba2, Asaf Levy3, Jeremy A Dodsworth4, Gisele B Goertz2, Natalia Ivanova3, Tanja Woyke3.   

Abstract

Meta-analysis of cultivation-independent sequence data shows that geothermal systems host an abundance of novel organisms, representing a vast unexplored phylogenetic and functional diversity among yet-uncultivated thermophiles. A number of thermophiles have recently been interrogated using metagenomic and/or single-cell genomic approaches, including members of taxonomic groups that inhabit both thermal and non-thermal environments, such as 'Acetothermia' (OP1) and 'Atribacteria' (OP9/JS1), as well as the exclusively thermophilic lineages 'Korarchaeota', 'Calescamantes' (EM19), 'Fervidibacteria' (OctSpA1-106), and 'Aigarchaeota' (HWCG-I). The 'Aigarchaeota', a sister lineage to the Thaumarchaeota, likely includes both hyperthermophiles and moderate thermophiles. They inhabit terrestrial, marine, and subsurface thermal environments and comprise at least nine genus-level lineages, several of which are globally distributed.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 26113243     DOI: 10.1016/j.mib.2015.06.008

Source DB:  PubMed          Journal:  Curr Opin Microbiol        ISSN: 1369-5274            Impact factor:   7.934


  16 in total

Review 1.  Perspectives on Cultivation Strategies of Archaea.

Authors:  Yihua Sun; Yang Liu; Jie Pan; Fengping Wang; Meng Li
Journal:  Microb Ecol       Date:  2019-08-20       Impact factor: 4.552

Review 2.  The growing tree of Archaea: new perspectives on their diversity, evolution and ecology.

Authors:  Panagiotis S Adam; Guillaume Borrel; Céline Brochier-Armanet; Simonetta Gribaldo
Journal:  ISME J       Date:  2017-08-04       Impact factor: 10.302

3.  Unexpected fungal communities in the Rehai thermal springs of Tengchong influenced by abiotic factors.

Authors:  Kai-Hui Liu; Xiao-Wei Ding; Nimaichand Salam; Bo Zhang; Xiao-Fei Tang; Baiwan Deng; Wen-Jun Li
Journal:  Extremophiles       Date:  2018-02-23       Impact factor: 2.395

4.  The deep, hot biosphere: Twenty-five years of retrospection.

Authors:  Daniel R Colman; Saroj Poudel; Blake W Stamps; Eric S Boyd; John R Spear
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-03       Impact factor: 11.205

Review 5.  Microbial diversity in extreme environments.

Authors:  Wen-Sheng Shu; Li-Nan Huang
Journal:  Nat Rev Microbiol       Date:  2021-11-09       Impact factor: 60.633

6.  Incomplete denitrification phenotypes in diverse Thermus species from diverse geothermal spring sediments and adjacent soils in southwest China.

Authors:  Chrisabelle C Mefferd; Enmin Zhou; Cale O Seymour; Noel A Bernardo; Shreya Srivastava; Amanda J Bengtson; Jian-Yu Jiao; Hailiang Dong; Wen-Jun Li; Brian P Hedlund
Journal:  Extremophiles       Date:  2022-07-08       Impact factor: 3.035

7.  An essential role for tungsten in the ecology and evolution of a previously uncultivated lineage of anaerobic, thermophilic Archaea.

Authors:  Steffen Buessecker; Marike Palmer; Dengxun Lai; Joshua Dimapilis; Xavier Mayali; Damon Mosier; Jian-Yu Jiao; Daniel R Colman; Lisa M Keller; Emily St John; Michelle Miranda; Cristina Gonzalez; Lizett Gonzalez; Christian Sam; Christopher Villa; Madeline Zhuo; Nicholas Bodman; Fernando Robles; Eric S Boyd; Alysia D Cox; Brian St Clair; Zheng-Shuang Hua; Wen-Jun Li; Anna-Louise Reysenbach; Matthew B Stott; Peter K Weber; Jennifer Pett-Ridge; Anne E Dekas; Brian P Hedlund; Jeremy A Dodsworth
Journal:  Nat Commun       Date:  2022-06-30       Impact factor: 17.694

8.  Extremophilic nitrite-oxidizing Chloroflexi from Yellowstone hot springs.

Authors:  Eva Spieck; Michael Spohn; Katja Wendt; Eberhard Bock; Jessup Shively; Jeroen Frank; Daniela Indenbirken; Malik Alawi; Sebastian Lücker; Jennifer Hüpeden
Journal:  ISME J       Date:  2019-10-17       Impact factor: 10.302

9.  Minerals Determined a Special Ecological Niche and Selectively Enriched Microbial Species from Bulk Water Communities in Hot Springs.

Authors:  Fangru Li; Shang Wang; Qing He; Wenhui Zhang; Dongyi Guo; Yidi Zhang; Wanming Hai; Yuxuan Sun; Hailiang Dong; Weiguo Hou
Journal:  Microorganisms       Date:  2021-05-10

10.  Genomic Analysis of Caldithrix abyssi, the Thermophilic Anaerobic Bacterium of the Novel Bacterial Phylum Calditrichaeota.

Authors:  Ilya V Kublanov; Olga M Sigalova; Sergey N Gavrilov; Alexander V Lebedinsky; Christian Rinke; Olga Kovaleva; Nikolai A Chernyh; Natalia Ivanova; Chris Daum; T B K Reddy; Hans-Peter Klenk; Stefan Spring; Markus Göker; Oleg N Reva; Margarita L Miroshnichenko; Nikos C Kyrpides; Tanja Woyke; Mikhail S Gelfand; Elizaveta A Bonch-Osmolovskaya
Journal:  Front Microbiol       Date:  2017-02-20       Impact factor: 5.640

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