Literature DB >> 34754082

Microbial diversity in extreme environments.

Wen-Sheng Shu1, Li-Nan Huang2.   

Abstract

A wide array of microorganisms, including many novel, phylogenetically deeply rooted taxa, survive and thrive in extreme environments. These unique and reduced-complexity ecosystems offer a tremendous opportunity for studying the structure, function and evolution of natural microbial communities. Marker gene surveys have resolved patterns and ecological drivers of these extremophile assemblages, revealing a vast uncultured microbial diversity and the often predominance of archaea in the most extreme conditions. New omics studies have uncovered linkages between community function and environmental variables, and have enabled discovery and genomic characterization of major new lineages that substantially expand microbial diversity and change the structure of the tree of life. These efforts have significantly advanced our understanding of the diversity, ecology and evolution of microorganisms populating Earth's extreme environments, and have facilitated the exploration of microbiota and processes in more complex ecosystems.
© 2021. Springer Nature Limited.

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Year:  2021        PMID: 34754082     DOI: 10.1038/s41579-021-00648-y

Source DB:  PubMed          Journal:  Nat Rev Microbiol        ISSN: 1740-1526            Impact factor:   60.633


  193 in total

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Journal:  Nature       Date:  2001-02-22       Impact factor: 49.962

2.  Microbial population structures in the deep marine biosphere.

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3.  AMD biofilms: using model communities to study microbial evolution and ecological complexity in nature.

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Journal:  ISME J       Date:  2010-02-18       Impact factor: 10.302

4.  Seasonal fluctuations in ionic concentrations drive microbial succession in a hypersaline lake community.

Authors:  Sheila Podell; Joanne B Emerson; Claudia M Jones; Juan A Ugalde; Sue Welch; Karla B Heidelberg; Jillian F Banfield; Eric E Allen
Journal:  ISME J       Date:  2013-12-12       Impact factor: 10.302

5.  Phylogenetic analysis of the hyperthermophilic pink filament community in Octopus Spring, Yellowstone National Park.

Authors:  A L Reysenbach; G S Wickham; N R Pace
Journal:  Appl Environ Microbiol       Date:  1994-06       Impact factor: 4.792

6.  SnapShot: Microbial Extremophiles.

Authors:  Amy K Schmid; Thorsten Allers; Jocelyne DiRuggiero
Journal:  Cell       Date:  2020-02-20       Impact factor: 41.582

7.  Phylogeny of microorganisms populating a thick, subaerial, predominantly lithotrophic biofilm at an extreme acid mine drainage site.

Authors:  P L Bond; S P Smriga; J F Banfield
Journal:  Appl Environ Microbiol       Date:  2000-09       Impact factor: 4.792

8.  The YNP Metagenome Project: Environmental Parameters Responsible for Microbial Distribution in the Yellowstone Geothermal Ecosystem.

Authors:  William P Inskeep; Zackary J Jay; Susannah G Tringe; Markus J Herrgård; Douglas B Rusch
Journal:  Front Microbiol       Date:  2013-05-06       Impact factor: 5.640

9.  Contemporary environmental variation determines microbial diversity patterns in acid mine drainage.

Authors:  Jia-Liang Kuang; Li-Nan Huang; Lin-Xing Chen; Zheng-Shuang Hua; Sheng-Jin Li; Min Hu; Jin-Tian Li; Wen-Sheng Shu
Journal:  ISME J       Date:  2012-11-22       Impact factor: 10.302

10.  Microbial biogeography of 925 geothermal springs in New Zealand.

Authors:  Jean F Power; Carlo R Carere; Charles K Lee; Georgia L J Wakerley; David W Evans; Mathew Button; Duncan White; Melissa D Climo; Annika M Hinze; Xochitl C Morgan; Ian R McDonald; S Craig Cary; Matthew B Stott
Journal:  Nat Commun       Date:  2018-07-23       Impact factor: 14.919

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  7 in total

1.  Functional Guilds, Community Assembly, and Co-occurrence Patterns of Fungi in Metalliferous Mine Tailings Ponds in Mainland China.

Authors:  Shi-Wei Feng; Jing-Li Lu; Jie-Liang Liang; Zhuo-Hui Wu; Xinzhu Yi; Ping Wen; Feng-Lin Li; Bin Liao; Pu Jia; Wen-Sheng Shu; Jin-Tian Li
Journal:  Microb Ecol       Date:  2022-10-07       Impact factor: 4.192

2.  Taxonomic Re-Evaluation and Genomic Comparison of Novel Extracellular Electron Uptake-Capable Rhodovulum visakhapatnamense and Rhodovulum sulfidophilum Isolates.

Authors:  Emily J Davenport; Arpita Bose
Journal:  Microorganisms       Date:  2022-06-16

3.  Patterns and ecological drivers of viral communities in acid mine drainage sediments across Southern China.

Authors:  Shaoming Gao; David Paez-Espino; Jintian Li; Hongxia Ai; Jieliang Liang; Zhenhao Luo; Jin Zheng; Hao Chen; Wensheng Shu; Linan Huang
Journal:  Nat Commun       Date:  2022-05-02       Impact factor: 17.694

4.  PREGO: A Literature and Data-Mining Resource to Associate Microorganisms, Biological Processes, and Environment Types.

Authors:  Haris Zafeiropoulos; Savvas Paragkamian; Stelios Ninidakis; Georgios A Pavlopoulos; Lars Juhl Jensen; Evangelos Pafilis
Journal:  Microorganisms       Date:  2022-01-26

5.  Unique Geothermal Chemistry Shapes Microbial Communities on Mt. Erebus, Antarctica.

Authors:  Stephen E Noell; Mafalda S Baptista; Emily Smith; Ian R McDonald; Charles K Lee; Matthew B Stott; Jan P Amend; S Craig Cary
Journal:  Front Microbiol       Date:  2022-05-03       Impact factor: 5.640

6.  Editorial: Extremophiles: Microbial genomics and taxogenomics.

Authors:  Rafael R de la Haba; André Antunes; Brian P Hedlund
Journal:  Front Microbiol       Date:  2022-08-02       Impact factor: 6.064

7.  Coevolution of the Ess1-CTD axis in polar fungi suggests a role for phase separation in cold tolerance.

Authors:  Ryan J Palumbo; Nathan McKean; Erinn Leatherman; Kevin E W Namitz; Laurie Connell; Aaron Wolfe; Kelsey Moody; Cene Gostinčar; Nina Gunde-Cimerman; Alaji Bah; Steven D Hanes
Journal:  Sci Adv       Date:  2022-09-07       Impact factor: 14.957

  7 in total

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