Literature DB >> 26106821

Functional Connectivity-Based Parcellation of the Thalamus: An Unsupervised Clustering Method and Its Validity Investigation.

Yang Fan1,2, Lisa D Nickerson3,4, Huanjie Li5, Yajun Ma1,2, Bingjiang Lyu1,2, Xinyuan Miao6, Yan Zhuo6, Jianqiao Ge1, Qihong Zou1, Jia-Hong Gao1,2,7.   

Abstract

Node definition or delineating how the brain is parcellated into individual functionally related regions is the first step to accurately map the human connectome. As a result, parcellation of the human brain has drawn considerable attention in the field of neuroscience. The thalamus is known as a relay in the human brain, with its nuclei sending fibers to the cortical and subcortical regions. Functional magnetic resonance imaging techniques offer a way to parcellate the thalamus in vivo based on its connectivity properties. However, the parcellations from previous studies show that both the number and the distribution of thalamic subdivisions vary with different cortical segmentation methods. In this study, we used an unsupervised clustering method that does not rely on a priori information of the cortical segmentation to parcellate the thalamus. Instead, this approach is based on the intrinsic resting-state functional connectivity profiles of the thalamus with the whole brain. A series of cluster solutions were obtained, and an optimal solution was determined. Furthermore, the validity of our parcellation was investigated through the following: (1) identifying specific resting-state connectivity patterns of thalamic parcels with different brain networks and (2) investigating the task activation and psychophysiological interactions of specific thalamic clusters during 8-Hz flashing checkerboard stimulation with simultaneous finger tapping. Together, the current study provides a reliable parcellation of the thalamus and enhances our understating of thalamic. Furthermore, the current study provides a framework for parcellation that could be potentially extended to other subcortical and cortical regions.

Entities:  

Keywords:  K-means; functional connectivity; parcellation; resting-state fMRI; thalamus; visuomotor task

Mesh:

Year:  2015        PMID: 26106821     DOI: 10.1089/brain.2015.0338

Source DB:  PubMed          Journal:  Brain Connect        ISSN: 2158-0014


  12 in total

1.  Dynamic thalamus parcellation from resting-state fMRI data.

Authors:  Bing Ji; Zhihao Li; Kaiming Li; Longchuan Li; Jason Langley; Hui Shen; Shengdong Nie; Renjie Zhang; Xiaoping Hu
Journal:  Hum Brain Mapp       Date:  2015-12-26       Impact factor: 5.038

2.  Functional atlas of the awake rat brain: A neuroimaging study of rat brain specialization and integration.

Authors:  Zhiwei Ma; Pablo Perez; Zilu Ma; Yikang Liu; Christina Hamilton; Zhifeng Liang; Nanyin Zhang
Journal:  Neuroimage       Date:  2016-07-05       Impact factor: 6.556

3.  MAPBOT: Meta-analytic parcellation based on text, and its application to the human thalamus.

Authors:  Rui Yuan; Paul A Taylor; Tara L Alvarez; Durga Misra; Bharat B Biswal
Journal:  Neuroimage       Date:  2017-06-17       Impact factor: 6.556

4.  Functional Connectivity Parcellation of the Human Thalamus by Independent Component Analysis.

Authors:  Sheng Zhang; Chiang-Shan R Li
Journal:  Brain Connect       Date:  2017-11

5.  BrainSync: An Orthogonal Transformation for Synchronization of fMRI Data Across Subjects.

Authors:  Anand A Joshi; Minqi Chong; Richard M Leahy
Journal:  Med Image Comput Comput Assist Interv       Date:  2017-09-04

6.  Performance ramifications of abnormal functional connectivity of ventral posterior lateral thalamus with cerebellum in abstinent individuals with Alcohol Use Disorder.

Authors:  Nicolas Honnorat; Manojkumar Saranathan; Edith V Sullivan; Adolf Pfefferbaum; Kilian M Pohl; Natalie M Zahr
Journal:  Drug Alcohol Depend       Date:  2021-01-08       Impact factor: 4.492

Review 7.  Spontaneous Neural Dynamics and Multi-scale Network Organization.

Authors:  Brett L Foster; Biyu J He; Christopher J Honey; Karim Jerbi; Alexander Maier; Yuri B Saalmann
Journal:  Front Syst Neurosci       Date:  2016-02-09

8.  Delineating functional segregations of the human middle temporal gyrus with resting-state functional connectivity and coactivation patterns.

Authors:  Jinping Xu; Hanqing Lyu; Tian Li; Ziyun Xu; Xianjun Fu; Fucang Jia; Jiaojian Wang; Qingmao Hu
Journal:  Hum Brain Mapp       Date:  2019-08-18       Impact factor: 5.038

9.  Keeping weight off: Mindfulness-Based Stress Reduction alters amygdala functional connectivity during weight loss maintenance in a randomized control trial.

Authors:  Serhiy Y Chumachenko; Ryan J Cali; Milagros C Rosal; Jeroan J Allison; Sharina J Person; Douglas Ziedonis; Benjamin C Nephew; Constance M Moore; Nanyin Zhang; Jean A King; Carl Fulwiler
Journal:  PLoS One       Date:  2021-01-11       Impact factor: 3.240

10.  Key Brain Network Nodes Show Differential Cognitive Relevance and Developmental Trajectories during Childhood and Adolescence.

Authors:  Knut K Kolskår; Dag Alnæs; Tobias Kaufmann; Geneviève Richard; Anne-Marthe Sanders; Kristine M Ulrichsen; Torgeir Moberget; Ole A Andreassen; Jan E Nordvik; Lars T Westlye
Journal:  eNeuro       Date:  2018-07-11
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