Literature DB >> 26104713

Serine Resolvases.

Phoebe A Rice1.   

Abstract

Serine resolvases are an interesting group of site-specific recombinases that, in their native contexts, resolve large fused replicons into smaller separated ones. Some resolvases are encoded by replicative transposons and resolve the transposition product, in which the donor and recipient molecules are fused, into separate replicons. Other resolvases are encoded by plasmids and function to resolve plasmid dimers into monomers. Both types are therefore involved in the spread and maintenance of antibiotic-resistance genes. Resolvases and the closely related invertases were the first serine recombinases to be studied in detail, and much of our understanding of the unusual strand exchange mechanism of serine recombinases is owed to those early studies. Resolvases and invertases have also served as paradigms for understanding how DNA topology can be harnessed to regulate enzyme activity. Finally, their relatively modular structure, combined with a wealth of structural and biochemical data, has made them good choices for engineering chimeric recombinases with designer specificity. This chapter focuses on the current understanding of serine resolvases, with a focus on the contributions of structural studies.

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Year:  2015        PMID: 26104713      PMCID: PMC5659196          DOI: 10.1128/microbiolspec.MDNA3-0045-2014

Source DB:  PubMed          Journal:  Microbiol Spectr        ISSN: 2165-0497


  84 in total

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Journal:  Mol Cell       Date:  2001-11       Impact factor: 17.970

2.  DNA bending in the Sin recombination synapse: functional replacement of HU by IHF.

Authors:  Sally-J Rowland; Martin R Boocock; W Marshall Stark
Journal:  Mol Microbiol       Date:  2006-03       Impact factor: 3.501

3.  Tn3 resolvase catalyses multiple recombination events without intermediate rejoining of DNA ends.

Authors:  M J McIlwraith; M R Boocock; W M Stark
Journal:  J Mol Biol       Date:  1997-02-14       Impact factor: 5.469

4.  Discovery of a predicted DNA knot substantiates a model for site-specific recombination.

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Journal:  Science       Date:  1985-07-12       Impact factor: 47.728

Review 5.  The ins and outs of serine integrase site-specific recombination.

Authors:  Karen Rutherford; Gregory D Van Duyne
Journal:  Curr Opin Struct Biol       Date:  2014-02-11       Impact factor: 6.809

Review 6.  Analysis of the mechanism of DNA recombination using tangles.

Authors:  D W Sumners; C Ernst; S J Spengler; N R Cozzarelli
Journal:  Q Rev Biophys       Date:  1995-08       Impact factor: 5.318

7.  Refinement of gamma delta resolvase reveals a strikingly flexible molecule.

Authors:  P A Rice; T A Steitz
Journal:  Structure       Date:  1994-05-15       Impact factor: 5.006

Review 8.  Integrating prokaryotes and eukaryotes: DNA transposases in light of structure.

Authors:  Alison Burgess Hickman; Michael Chandler; Fred Dyda
Journal:  Crit Rev Biochem Mol Biol       Date:  2010-02       Impact factor: 8.250

Review 9.  Orchestrating serine resolvases.

Authors:  Phoebe A Rice; Kent W Mouw; Sherwin P Montaño; Martin R Boocock; Sally-J Rowland; W Marshall Stark
Journal:  Biochem Soc Trans       Date:  2010-04       Impact factor: 5.407

10.  Isolation and characterization of unusual gin mutants.

Authors:  A Klippel; K Cloppenborg; R Kahmann
Journal:  EMBO J       Date:  1988-12-01       Impact factor: 11.598

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  11 in total

1.  Loop-closure kinetics reveal a stable, right-handed DNA intermediate in Cre recombination.

Authors:  Massa J Shoura; Stefan M Giovan; Alexandre A Vetcher; Riccardo Ziraldo; Andreas Hanke; Stephen D Levene
Journal:  Nucleic Acids Res       Date:  2020-05-07       Impact factor: 16.971

2.  Evolution of a 72-Kilobase Cointegrant, Conjugative Multiresistance Plasmid in Community-Associated Methicillin-Resistant Staphylococcus aureus Isolates from the Early 1990s.

Authors:  Karina Yui Eto; Neville Firth; Amy M Davis; Stephen M Kwong; Marcelina Krysiak; Yung Thin Lee; Frances G O'Brien; Warren B Grubb; Geoffrey W Coombs; Charles S Bond; Joshua P Ramsay
Journal:  Antimicrob Agents Chemother       Date:  2019-10-22       Impact factor: 5.191

3.  Unbiased profiling of CRISPR RNA-guided transposition products by long-read sequencing.

Authors:  Phuc Leo H Vo; Christopher Acree; Melissa L Smith; Samuel H Sternberg
Journal:  Mob DNA       Date:  2021-06-08

4.  Controlling tetramer formation, subunit rotation and DNA ligation during Hin-catalyzed DNA inversion.

Authors:  Yong Chang; Reid C Johnson
Journal:  Nucleic Acids Res       Date:  2015-06-08       Impact factor: 16.971

Review 5.  Single-Molecule Tethered Particle Motion: Stepwise Analyses of Site-Specific DNA Recombination.

Authors:  Hsiu-Fang Fan; Chien-Hui Ma; Makkuni Jayaram
Journal:  Micromachines (Basel)       Date:  2018-05-03       Impact factor: 2.891

6.  Snapshots of a molecular swivel in action.

Authors:  Caitlin S Trejo; Ronald S Rock; W Marshall Stark; Martin R Boocock; Phoebe A Rice
Journal:  Nucleic Acids Res       Date:  2018-06-01       Impact factor: 16.971

7.  Control of the Serine Integrase Reaction: Roles of the Coiled-Coil and Helix E Regions in DNA Site Synapsis and Recombination.

Authors:  Sridhar Mandali; Reid C Johnson
Journal:  J Bacteriol       Date:  2021-07-22       Impact factor: 3.490

8.  Controlled rotation mechanism of DNA strand exchange by the Hin serine recombinase.

Authors:  Botao Xiao; Meghan M McLean; Xianbin Lei; John F Marko; Reid C Johnson
Journal:  Sci Rep       Date:  2016-04-01       Impact factor: 4.379

Review 9.  Engineering altered protein-DNA recognition specificity.

Authors:  Adam J Bogdanove; Andrew Bohm; Jeffrey C Miller; Richard D Morgan; Barry L Stoddard
Journal:  Nucleic Acids Res       Date:  2018-06-01       Impact factor: 16.971

10.  Multiple serine transposase dimers assemble the transposon-end synaptic complex during IS607-family transposition.

Authors:  Wenyang Chen; Sridhar Mandali; Stephen P Hancock; Pramod Kumar; Michael Collazo; Duilio Cascio; Reid C Johnson
Journal:  Elife       Date:  2018-10-05       Impact factor: 8.140

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