Literature DB >> 26104699

An Unexplored Diversity of Reverse Transcriptases in Bacteria.

Steven Zimmerly1, Li Wu1.   

Abstract

Reverse transcriptases (RTs) are usually thought of as eukaryotic enzymes, but they are also present in bacteria and likely originated in bacteria and migrated to eukaryotes. Only three types of bacterial retroelements have been substantially characterized: group II introns, diversity-generating retroelements, and retrons. Recent work, however, has identified a myriad of uncharacterized RTs and RT-related sequences in bacterial genomes, which exhibit great sequence diversity and a range of domain structures. Apart from group II introns, none of these putative RTs show evidence of active retromobility. Instead, available information suggests that they are involved in useful processes, sometimes related to phages or phage resistance. This article reviews our knowledge of both characterized and uncharacterized RTs in bacteria. The range of their sequences and genomic contexts promises the discovery of new biochemical reactions and biological phenomena.

Mesh:

Substances:

Year:  2015        PMID: 26104699     DOI: 10.1128/microbiolspec.MDNA3-0058-2014

Source DB:  PubMed          Journal:  Microbiol Spectr        ISSN: 2165-0497


  26 in total

1.  Multiple origins of reverse transcriptases linked to CRISPR-Cas systems.

Authors:  Nicolás Toro; Francisco Martínez-Abarca; Mario Rodríguez Mestre; Alejandro González-Delgado
Journal:  RNA Biol       Date:  2019-07-11       Impact factor: 4.652

2.  Highly regulated, diversifying NTP-dependent biological conflict systems with implications for the emergence of multicellularity.

Authors:  Gurmeet Kaur; A Maxwell Burroughs; Lakshminarayan M Iyer; L Aravind
Journal:  Elife       Date:  2020-02-26       Impact factor: 8.140

Review 3.  Global Organization and Proposed Megataxonomy of the Virus World.

Authors:  Eugene V Koonin; Valerian V Dolja; Mart Krupovic; Arvind Varsani; Yuri I Wolf; Natalya Yutin; F Murilo Zerbini; Jens H Kuhn
Journal:  Microbiol Mol Biol Rev       Date:  2020-03-04       Impact factor: 11.056

Review 4.  Mobile Group II Introns as Ancestral Eukaryotic Elements.

Authors:  Olga Novikova; Marlene Belfort
Journal:  Trends Genet       Date:  2017-08-14       Impact factor: 11.639

5.  TGIRT-seq Protocol for the Comprehensive Profiling of Coding and Non-coding RNA Biotypes in Cellular, Extracellular Vesicle, and Plasma RNAs.

Authors:  Hengyi Xu; Ryan M Nottingham; Alan M Lambowitz
Journal:  Bio Protoc       Date:  2021-12-05

6.  Group II intron-like reverse transcriptases function in double-strand break repair.

Authors:  Seung Kuk Park; Georg Mohr; Jun Yao; Rick Russell; Alan M Lambowitz
Journal:  Cell       Date:  2022-09-15       Impact factor: 66.850

7.  Diverse enzymatic activities mediate antiviral immunity in prokaryotes.

Authors:  Linyi Gao; Han Altae-Tran; Francisca Böhning; Kira S Makarova; Michael Segel; Jonathan L Schmid-Burgk; Jeremy Koob; Yuri I Wolf; Eugene V Koonin; Feng Zhang
Journal:  Science       Date:  2020-08-28       Impact factor: 47.728

8.  A Reverse Transcriptase-Cas1 Fusion Protein Contains a Cas6 Domain Required for Both CRISPR RNA Biogenesis and RNA Spacer Acquisition.

Authors:  Georg Mohr; Sukrit Silas; Jennifer L Stamos; Kira S Makarova; Laura M Markham; Jun Yao; Patricia Lucas-Elío; Antonio Sanchez-Amat; Andrew Z Fire; Eugene V Koonin; Alan M Lambowitz
Journal:  Mol Cell       Date:  2018-10-18       Impact factor: 17.970

Review 9.  Synthetic evolution.

Authors:  Anna J Simon; Simon d'Oelsnitz; Andrew D Ellington
Journal:  Nat Biotechnol       Date:  2019-06-17       Impact factor: 54.908

Review 10.  The Baltimore Classification of Viruses 50 Years Later: How Does It Stand in the Light of Virus Evolution?

Authors:  Eugene V Koonin; Mart Krupovic; Vadim I Agol
Journal:  Microbiol Mol Biol Rev       Date:  2021-07-14       Impact factor: 13.044

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.