Literature DB >> 26095031

Structures of Orf Virus Chemokine Binding Protein in Complex with Host Chemokines Reveal Clues to Broad Binding Specificity.

Rafael M Couñago1, Karen M Knapp2, Yoshio Nakatani3, Stephen B Fleming4, Michael Corbett4, Lyn M Wise4, Andrew A Mercer4, Kurt L Krause5.   

Abstract

The chemokine binding protein (CKBP) from orf virus (ORFV) binds with high affinity to chemokines from three classes, C, CC, and CXC, making it unique among poxvirus CKBPs described to date. We present its crystal structure alone and in complex with three CC chemokines, CCL2, CCL3, and CCL7. ORFV CKBP possesses a β-sandwich fold that is electrostatically and sterically complementary to its binding partners. Chemokines bind primarily through interactions involving the N-terminal loop and a hydrophobic recess on the ORFV CKBP β-sheet II surface, and largely polar interactions between the chemokine 20s loop and a negatively charged surface groove located at one end of the CKBP β-sheet II surface. ORFV CKBP interacts with leukocyte receptor and glycosaminoglycan binding sites found on the surface of bound chemokines. SEC-MALLS and chromatographic evidence is presented supporting that ORFV CKBP is a dimer in solution over a broad range of protein concentrations.
Copyright © 2015 Elsevier Ltd. All rights reserved.

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Year:  2015        PMID: 26095031     DOI: 10.1016/j.str.2015.04.023

Source DB:  PubMed          Journal:  Structure        ISSN: 0969-2126            Impact factor:   5.006


  12 in total

Review 1.  What Do Structures Tell Us About Chemokine Receptor Function and Antagonism?

Authors:  Irina Kufareva; Martin Gustavsson; Yi Zheng; Bryan S Stephens; Tracy M Handel
Journal:  Annu Rev Biophys       Date:  2017-05-22       Impact factor: 12.981

Review 2.  Mechanisms of immunomodulation by mammalian and viral decoy receptors: insights from structures.

Authors:  Jan Felix; Savvas N Savvides
Journal:  Nat Rev Immunol       Date:  2016-12-28       Impact factor: 53.106

Review 3.  Chemokines and their receptors: insights from molecular modeling and crystallography.

Authors:  Irina Kufareva
Journal:  Curr Opin Pharmacol       Date:  2016-07-25       Impact factor: 5.547

4.  Structural basis of GM-CSF and IL-2 sequestration by the viral decoy receptor GIF.

Authors:  Jan Felix; Eaazhisai Kandiah; Steven De Munck; Yehudi Bloch; Gydo C P van Zundert; Kris Pauwels; Ann Dansercoer; Katka Novanska; Randy J Read; Alexandre M J J Bonvin; Bjorn Vergauwen; Kenneth Verstraete; Irina Gutsche; Savvas N Savvides
Journal:  Nat Commun       Date:  2016-11-07       Impact factor: 14.919

5.  A Broad-Spectrum Chemokine-Binding Protein of Bovine Papular Stomatitis Virus Inhibits Neutrophil and Monocyte Infiltration in Inflammatory and Wound Models of Mouse Skin.

Authors:  Saeed Sharif; Yoshio Nakatani; Lyn Wise; Michael Corbett; Nicola C Real; Gabriella S Stuart; Zabeen Lateef; Kurt Krause; Andrew A Mercer; Stephen B Fleming
Journal:  PLoS One       Date:  2016-12-09       Impact factor: 3.240

6.  Deletion of the Chemokine Binding Protein Gene from the Parapoxvirus Orf Virus Reduces Virulence and Pathogenesis in Sheep.

Authors:  Stephen B Fleming; Catherine McCaughan; Zabeen Lateef; Amy Dunn; Lyn M Wise; Nicola C Real; Andrew A Mercer
Journal:  Front Microbiol       Date:  2017-01-24       Impact factor: 5.640

7.  Genetically engineered two-warhead evasins provide a method to achieve precision targeting of disease-relevant chemokine subsets.

Authors:  Yara Alenazi; Kamayani Singh; Graham Davies; James R O Eaton; Philip Elders; Akane Kawamura; Shoumo Bhattacharya
Journal:  Sci Rep       Date:  2018-04-20       Impact factor: 4.379

8.  Selective Deletion of Heparan Sulfotransferase Enzyme, Ndst1, in Donor Endothelial and Myeloid Precursor Cells Significantly Decreases Acute Allograft Rejection.

Authors:  Hao Chen; Sriram Ambadapadi; Dara Wakefield; Meeyong Bartee; Jordan R Yaron; Liqiang Zhang; Stephanie A Archer-Hartmann; Parastoo Azadi; Michelle Burgin; Chad Borges; Donghang Zheng; Kevin Ergle; Vishnu Muppala; Sufi Morshed; Kenneth Rand; William Clapp; Amanda Proudfoot; Alexandra Lucas
Journal:  Sci Rep       Date:  2018-09-07       Impact factor: 4.379

9.  Purification of native CCL7 and its functional interaction with selected chemokine receptors.

Authors:  Marina V Goncharuk; Debarati Roy; Maxim A Dubinnyi; Kirill D Nadezhdin; Ashish Srivastava; Mithu Baidya; Hemlata Dwivedi-Agnihotri; Alexander S Arseniev; Arun K Shukla
Journal:  Protein Expr Purif       Date:  2020-03-05       Impact factor: 1.650

Review 10.  Deriving Immune Modulating Drugs from Viruses-A New Class of Biologics.

Authors:  Jordan R Yaron; Liqiang Zhang; Qiuyun Guo; Michelle Burgin; Lauren N Schutz; Enkidia Awo; Lyn Wise; Kurt L Krause; Cristhian J Ildefonso; Jacek M Kwiecien; Michael Juby; Masmudur M Rahman; Hao Chen; Richard W Moyer; Antonio Alcami; Grant McFadden; Alexandra R Lucas
Journal:  J Clin Med       Date:  2020-03-31       Impact factor: 4.241

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