Literature DB >> 26090205

Crystal structure of N-carbamo-thioyl-2-methyl-benzamide.

Farook Adam1, Nadiah Ameram1, Wai Mun Tan1.   

Abstract

There are two mol-ecules in the asymmetric unit of the title compound, C9H10N2OS. In one, the dihedral angle between the aromatic ring and the carbamo-thioyl group is 52.31 (7)° and in the other it is 36.16 (6)°. Each mol-ecule features an intra-molecular N-H⋯O hydrogen bond, which generates an S(6) ring and the O and S atoms have an anti disposition. In the crystal, mol-ecules are linked by N-H⋯S and N-H⋯O hydrogen bonds, generating separate [130] and [1-30] infinite chains. Weak C-H⋯O and C-H⋯S inter-actions are also observed.

Entities:  

Keywords:  benzamide; crystal structure; hydrogen bonding; thio­urea

Year:  2015        PMID: 26090205      PMCID: PMC4459304          DOI: 10.1107/S2056989015009585

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For related structures, see: Saeed & Flörke (2007 ▸); Shoukat et al. (2007 ▸); Hassan et al. (2008a ▸,b ▸,c ▸); Ameram et al. (2015 ▸).

Experimental

Crystal data

C9H10N2OS M = 194.25 Monoclinic, a = 22.7886 (12) Å b = 7.1133 (3) Å c = 25.5388 (13) Å β = 113.664 (3)° V = 3791.8 (3) Å3 Z = 16 Mo Kα radiation μ = 0.30 mm−1 T = 100 K 0.46 × 0.33 × 0.10 mm

Data collection

Bruker APEX DUO CCD diffractometer Absorption correction: multi-scan (SADABS; Bruker, 2009 ▸) T min = 0.814, T max = 0.872 70711 measured reflections 5697 independent reflections 4862 reflections with I > 2σ(I) R int = 0.051

Refinement

R[F 2 > 2σ(F 2)] = 0.043 wR(F 2) = 0.110 S = 1.10 5697 reflections 261 parameters H atoms treated by a mixture of independent and constrained refinement Δρmax = 0.45 e Å−3 Δρmin = −0.22 e Å−3

Data collection: APEX2 (Bruker, 2009 ▸); cell refinement: SAINT (Bruker, 2009 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS2013 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL2014 (Sheldrick, 2015 ▸); molecular graphics: SHELXTL (Sheldrick, 2008 ▸); software used to prepare material for publication: PLATON (Spek, 2009 ▸). Crystal structure: contains datablock(s) I, New_Global_Publ_Block. DOI: 10.1107/S2056989015009585/hb7426sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989015009585/hb7426Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989015009585/hb7426Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989015009585/hb7426fig1.tif A view of the mol­ecular structure of the title compound, showing the atom labellling. Displacement ellipsoids are drawn at the 50% probability level. Click here for additional data file. . DOI: 10.1107/S2056989015009585/hb7426fig2.tif A view of the crystal packing of the title compound. Hydrogen bonds are shown as dashed lines (see Table 1 for details). CCDC reference: 1401733 Additional supporting information: crystallographic information; 3D view; checkCIF report
C9H10N2OSF(000) = 1632
Mr = 194.25Dx = 1.361 Mg m3
Monoclinic, C2/cMo Kα radiation, λ = 0.71073 Å
a = 22.7886 (12) ÅCell parameters from 9948 reflections
b = 7.1133 (3) Åθ = 3.0–29.9°
c = 25.5388 (13) ŵ = 0.30 mm1
β = 113.664 (3)°T = 100 K
V = 3791.8 (3) Å3Plate, colourless
Z = 160.46 × 0.33 × 0.10 mm
Bruker APEX DUO CCD diffractometer5697 independent reflections
Radiation source: fine-focus sealed tube4862 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.051
φ and ω scansθmax = 30.4°, θmin = 1.7°
Absorption correction: multi-scan (SADABS; Bruker, 2009)h = −32→32
Tmin = 0.814, Tmax = 0.872k = −10→10
70711 measured reflectionsl = −36→36
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.043H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.110w = 1/[σ2(Fo2) + (0.0488P)2 + 4.2106P] where P = (Fo2 + 2Fc2)/3
S = 1.10(Δ/σ)max = 0.001
5697 reflectionsΔρmax = 0.45 e Å3
261 parametersΔρmin = −0.22 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
xyzUiso*/Ueq
S1A0.20453 (2)0.37036 (5)0.04623 (2)0.02123 (9)
O1A0.05447 (5)0.09550 (16)−0.11126 (5)0.0285 (3)
N1A0.15344 (6)0.12795 (17)−0.03834 (5)0.0195 (2)
N2A0.08336 (6)0.3410 (2)−0.02644 (7)0.0264 (3)
C1A0.12721 (8)−0.1174 (2)−0.16760 (7)0.0255 (3)
C2A0.14877 (8)−0.2742 (2)−0.18702 (7)0.0290 (3)
H2AA0.1428−0.2801−0.22600.035*
C3A0.17880 (7)−0.4224 (2)−0.15103 (7)0.0257 (3)
H3AA0.1925−0.5289−0.16560.031*
C4A0.18880 (7)−0.4154 (2)−0.09401 (7)0.0239 (3)
H4AA0.2096−0.5165−0.06920.029*
C5A0.16820 (7)−0.2595 (2)−0.07329 (6)0.0215 (3)
H5AA0.1756−0.2531−0.03400.026*
C6A0.13688 (7)−0.11301 (19)−0.10979 (6)0.0190 (3)
C7A0.11026 (7)0.0452 (2)−0.08773 (6)0.0202 (3)
C8A0.14215 (7)0.27880 (19)−0.00939 (6)0.0186 (3)
C9A0.09650 (12)0.0421 (3)−0.20800 (9)0.0462 (5)
H9AA0.11690.1608−0.19060.069*
H9AB0.05070.0472−0.21590.069*
H9AC0.10190.0222−0.24380.069*
S1B0.45007 (2)0.73146 (5)−0.00298 (2)0.02408 (10)
O1B0.31413 (5)0.45230 (16)−0.16642 (5)0.0258 (2)
N1B0.40643 (6)0.47799 (17)−0.08568 (5)0.0187 (2)
N2B0.33660 (6)0.71847 (19)−0.08869 (6)0.0227 (3)
C1B0.35431 (7)0.0654 (2)−0.17791 (6)0.0199 (3)
C2B0.38290 (8)−0.0911 (2)−0.19102 (6)0.0240 (3)
H2BA0.3574−0.1983−0.20760.029*
C3B0.44736 (8)−0.0943 (2)−0.18057 (7)0.0278 (3)
H3BA0.4653−0.2025−0.19030.033*
C4B0.48592 (7)0.0595 (2)−0.15600 (7)0.0276 (3)
H4BA0.53000.0586−0.14960.033*
C5B0.45933 (7)0.2151 (2)−0.14083 (6)0.0231 (3)
H5BA0.48560.3203−0.12340.028*
C6B0.39425 (7)0.2184 (2)−0.15102 (6)0.0184 (3)
C7B0.36692 (7)0.3907 (2)−0.13618 (6)0.0190 (3)
C8B0.39349 (6)0.64135 (19)−0.06277 (6)0.0177 (3)
C9B0.28310 (7)0.0629 (2)−0.19377 (7)0.0244 (3)
H9BA0.27410.1143−0.16220.037*
H9BB0.2674−0.0667−0.20140.037*
H9BC0.26150.1396−0.22810.037*
H1B0.4428 (11)0.433 (3)−0.0664 (9)0.038 (6)*
H3A0.0543 (11)0.291 (3)−0.0542 (10)0.039 (6)*
H1A0.1904 (10)0.102 (3)−0.0300 (8)0.028 (5)*
H3B0.3275 (10)0.827 (3)−0.0763 (9)0.037 (6)*
H2B0.3111 (11)0.667 (3)−0.1184 (10)0.039 (6)*
H2A0.0765 (10)0.437 (3)−0.0096 (9)0.038 (6)*
U11U22U33U12U13U23
S1A0.02084 (16)0.02238 (18)0.01948 (17)0.00473 (13)0.00704 (13)−0.00419 (13)
O1A0.0193 (5)0.0211 (5)0.0368 (6)0.0039 (4)0.0025 (4)−0.0060 (5)
N1A0.0165 (5)0.0181 (6)0.0231 (6)0.0031 (4)0.0070 (5)−0.0040 (5)
N2A0.0192 (6)0.0210 (6)0.0374 (8)0.0021 (5)0.0098 (6)−0.0096 (6)
C1A0.0309 (8)0.0211 (7)0.0227 (7)−0.0002 (6)0.0089 (6)0.0015 (6)
C2A0.0364 (8)0.0294 (8)0.0220 (7)0.0000 (7)0.0127 (6)−0.0030 (6)
C3A0.0257 (7)0.0225 (7)0.0313 (8)−0.0003 (6)0.0140 (6)−0.0073 (6)
C4A0.0245 (7)0.0184 (7)0.0281 (8)0.0049 (5)0.0100 (6)0.0013 (6)
C5A0.0232 (7)0.0197 (7)0.0211 (7)0.0037 (5)0.0085 (5)0.0004 (5)
C6A0.0187 (6)0.0152 (6)0.0213 (7)−0.0007 (5)0.0062 (5)−0.0021 (5)
C7A0.0203 (6)0.0143 (6)0.0242 (7)−0.0003 (5)0.0070 (5)−0.0004 (5)
C8A0.0198 (6)0.0153 (6)0.0225 (7)0.0004 (5)0.0104 (5)−0.0004 (5)
C9A0.0681 (14)0.0369 (10)0.0309 (9)0.0167 (10)0.0169 (9)0.0128 (8)
S1B0.01921 (17)0.02226 (18)0.02552 (19)0.00457 (13)0.00349 (14)−0.00916 (14)
O1B0.0238 (5)0.0242 (5)0.0222 (5)0.0056 (4)0.0017 (4)−0.0022 (4)
N1B0.0178 (5)0.0167 (5)0.0182 (6)0.0029 (4)0.0035 (4)−0.0036 (4)
N2B0.0201 (6)0.0209 (6)0.0231 (6)0.0052 (5)0.0044 (5)−0.0038 (5)
C1B0.0230 (6)0.0196 (7)0.0142 (6)−0.0007 (5)0.0045 (5)−0.0002 (5)
C2B0.0297 (7)0.0183 (7)0.0200 (7)−0.0002 (6)0.0059 (6)−0.0032 (5)
C3B0.0304 (8)0.0240 (7)0.0248 (7)0.0073 (6)0.0068 (6)−0.0060 (6)
C4B0.0220 (7)0.0303 (8)0.0277 (8)0.0038 (6)0.0069 (6)−0.0079 (6)
C5B0.0223 (7)0.0227 (7)0.0216 (7)−0.0004 (5)0.0059 (5)−0.0056 (6)
C6B0.0215 (6)0.0174 (6)0.0147 (6)0.0015 (5)0.0056 (5)−0.0012 (5)
C7B0.0207 (6)0.0171 (6)0.0179 (6)−0.0005 (5)0.0063 (5)−0.0020 (5)
C8B0.0188 (6)0.0155 (6)0.0195 (6)0.0015 (5)0.0083 (5)−0.0003 (5)
C9B0.0227 (7)0.0265 (8)0.0216 (7)−0.0043 (6)0.0063 (6)−0.0044 (6)
S1A—C8A1.6858 (15)S1B—C8B1.6806 (14)
O1A—C7A1.2215 (17)O1B—C7B1.2207 (17)
N1A—C7A1.3818 (19)N1B—C8B1.3850 (18)
N1A—C8A1.3845 (18)N1B—C7B1.3883 (18)
N1A—H1A0.80 (2)N1B—H1B0.84 (2)
N2A—C8A1.3083 (18)N2B—C8B1.3156 (18)
N2A—H3A0.83 (2)N2B—H3B0.89 (2)
N2A—H2A0.86 (2)N2B—H2B0.83 (2)
C1A—C2A1.388 (2)C1B—C2B1.397 (2)
C1A—C6A1.403 (2)C1B—C6B1.408 (2)
C1A—C9A1.504 (2)C1B—C9B1.507 (2)
C2A—C3A1.385 (2)C2B—C3B1.384 (2)
C2A—H2AA0.9500C2B—H2BA0.9500
C3A—C4A1.381 (2)C3B—C4B1.386 (2)
C3A—H3AA0.9500C3B—H3BA0.9500
C4A—C5A1.389 (2)C4B—C5B1.390 (2)
C4A—H4AA0.9500C4B—H4BA0.9500
C5A—C6A1.389 (2)C5B—C6B1.399 (2)
C5A—H5AA0.9500C5B—H5BA0.9500
C6A—C7A1.492 (2)C6B—C7B1.4909 (19)
C9A—H9AA0.9800C9B—H9BA0.9800
C9A—H9AB0.9800C9B—H9BB0.9800
C9A—H9AC0.9800C9B—H9BC0.9800
C7A—N1A—C8A126.92 (12)C8B—N1B—C7B126.81 (12)
C7A—N1A—H1A115.6 (14)C8B—N1B—H1B113.6 (15)
C8A—N1A—H1A115.7 (14)C7B—N1B—H1B119.6 (15)
C8A—N2A—H3A119.9 (16)C8B—N2B—H3B120.3 (14)
C8A—N2A—H2A118.2 (14)C8B—N2B—H2B117.4 (16)
H3A—N2A—H2A122 (2)H3B—N2B—H2B122 (2)
C2A—C1A—C6A117.74 (14)C2B—C1B—C6B117.41 (13)
C2A—C1A—C9A119.66 (15)C2B—C1B—C9B118.81 (13)
C6A—C1A—C9A122.58 (15)C6B—C1B—C9B123.77 (13)
C3A—C2A—C1A121.71 (15)C3B—C2B—C1B121.89 (14)
C3A—C2A—H2AA119.1C3B—C2B—H2BA119.1
C1A—C2A—H2AA119.1C1B—C2B—H2BA119.1
C4A—C3A—C2A120.05 (14)C2B—C3B—C4B120.35 (14)
C4A—C3A—H3AA120.0C2B—C3B—H3BA119.8
C2A—C3A—H3AA120.0C4B—C3B—H3BA119.8
C3A—C4A—C5A119.48 (14)C3B—C4B—C5B119.14 (14)
C3A—C4A—H4AA120.3C3B—C4B—H4BA120.4
C5A—C4A—H4AA120.3C5B—C4B—H4BA120.4
C4A—C5A—C6A120.29 (14)C4B—C5B—C6B120.64 (14)
C4A—C5A—H5AA119.9C4B—C5B—H5BA119.7
C6A—C5A—H5AA119.9C6B—C5B—H5BA119.7
C5A—C6A—C1A120.71 (13)C5B—C6B—C1B120.48 (13)
C5A—C6A—C7A119.33 (13)C5B—C6B—C7B119.09 (13)
C1A—C6A—C7A119.88 (13)C1B—C6B—C7B120.34 (13)
O1A—C7A—N1A122.93 (13)O1B—C7B—N1B122.28 (13)
O1A—C7A—C6A122.40 (13)O1B—C7B—C6B122.72 (13)
N1A—C7A—C6A114.67 (12)N1B—C7B—C6B115.00 (12)
N2A—C8A—N1A117.98 (13)N2B—C8B—N1B118.11 (13)
N2A—C8A—S1A123.67 (12)N2B—C8B—S1B122.68 (11)
N1A—C8A—S1A118.34 (10)N1B—C8B—S1B119.21 (10)
C1A—C9A—H9AA109.5C1B—C9B—H9BA109.5
C1A—C9A—H9AB109.5C1B—C9B—H9BB109.5
H9AA—C9A—H9AB109.5H9BA—C9B—H9BB109.5
C1A—C9A—H9AC109.5C1B—C9B—H9BC109.5
H9AA—C9A—H9AC109.5H9BA—C9B—H9BC109.5
H9AB—C9A—H9AC109.5H9BB—C9B—H9BC109.5
C6A—C1A—C2A—C3A0.1 (2)C6B—C1B—C2B—C3B−2.8 (2)
C9A—C1A—C2A—C3A178.34 (18)C9B—C1B—C2B—C3B176.38 (14)
C1A—C2A—C3A—C4A−0.9 (3)C1B—C2B—C3B—C4B0.5 (2)
C2A—C3A—C4A—C5A0.4 (2)C2B—C3B—C4B—C5B1.4 (3)
C3A—C4A—C5A—C6A1.0 (2)C3B—C4B—C5B—C6B−1.0 (2)
C4A—C5A—C6A—C1A−1.9 (2)C4B—C5B—C6B—C1B−1.3 (2)
C4A—C5A—C6A—C7A174.80 (13)C4B—C5B—C6B—C7B−177.71 (14)
C2A—C1A—C6A—C5A1.3 (2)C2B—C1B—C6B—C5B3.2 (2)
C9A—C1A—C6A—C5A−176.90 (17)C9B—C1B—C6B—C5B−175.98 (14)
C2A—C1A—C6A—C7A−175.35 (14)C2B—C1B—C6B—C7B179.53 (13)
C9A—C1A—C6A—C7A6.5 (2)C9B—C1B—C6B—C7B0.4 (2)
C8A—N1A—C7A—O1A−2.2 (2)C8B—N1B—C7B—O1B−0.6 (2)
C8A—N1A—C7A—C6A178.65 (13)C8B—N1B—C7B—C6B178.45 (13)
C5A—C6A—C7A—O1A−126.72 (16)C5B—C6B—C7B—O1B139.95 (15)
C1A—C6A—C7A—O1A50.0 (2)C1B—C6B—C7B—O1B−36.5 (2)
C5A—C6A—C7A—N1A52.41 (18)C5B—C6B—C7B—N1B−39.13 (19)
C1A—C6A—C7A—N1A−130.91 (15)C1B—C6B—C7B—N1B144.47 (13)
C7A—N1A—C8A—N2A7.1 (2)C7B—N1B—C8B—N2B4.7 (2)
C7A—N1A—C8A—S1A−173.59 (12)C7B—N1B—C8B—S1B−176.08 (12)
D—H···AD—HH···AD···AD—H···A
N1A—H1A···S1Ai0.80 (2)2.60 (2)3.3227 (16)151.2 (18)
N1B—H1B···S1Bii0.84 (2)2.65 (2)3.4780 (14)172 (2)
N2A—H2A···S1Biii0.85 (2)2.49 (2)3.2945 (15)157.8 (19)
N2B—H2B···O1B0.83 (2)1.98 (2)2.6404 (18)136 (2)
N2A—H3A···O1A0.83 (2)2.02 (2)2.6515 (19)133 (2)
N2B—H3B···S1Aiii0.89 (2)2.49 (2)3.3800 (14)177 (2)
C5B—H5BA···O1Aiv0.952.453.3584 (19)160
C9B—H9BA···S1Ai0.982.803.6946 (17)152
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
N1AH1AS1A i 0.80(2)2.60(2)3.3227(16)151.2(18)
N1BH1BS1B ii 0.84(2)2.65(2)3.4780(14)172(2)
N2AH2AS1B iii 0.85(2)2.49(2)3.2945(15)157.8(19)
N2BH2BO1B 0.83(2)1.98(2)2.6404(18)136(2)
N2AH3AO1A 0.83(2)2.02(2)2.6515(19)133(2)
N2BH3BS1A iii 0.89(2)2.49(2)3.3800(14)177(2)
C5BH5BAO1A iv 0.952.453.3584(19)160
C9BH9BAS1A i 0.982.803.6946(17)152

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .

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