Literature DB >> 26085347

Toxicokinetic Triage for Environmental Chemicals.

John F Wambaugh1, Barbara A Wetmore2, Robert Pearce3, Cory Strope4, Rocky Goldsmith5, James P Sluka6, Alexander Sedykh7, Alex Tropsha7, Sieto Bosgra8, Imran Shah3, Richard Judson3, Russell S Thomas3, R Woodrow Setzer3.   

Abstract

Toxicokinetic (TK) models link administered doses to plasma, blood, and tissue concentrations. High-throughput TK (HTTK) performs in vitro to in vivo extrapolation to predict TK from rapid in vitro measurements and chemical structure-based properties. A significant toxicological application of HTTK has been "reverse dosimetry," in which bioactive concentrations from in vitro screening studies are converted into in vivo doses (mg/kg BW/day). These doses are predicted to produce steady-state plasma concentrations that are equivalent to in vitro bioactive concentrations. In this study, we evaluate the impact of the approximations and assumptions necessary for reverse dosimetry and develop methods to determine whether HTTK tools are appropriate or may lead to false conclusions for a particular chemical. Based on literature in vivo data for 87 chemicals, we identified specific properties (eg, in vitro HTTK data, physico-chemical descriptors, and predicted transporter affinities) that correlate with poor HTTK predictive ability. For 271 chemicals we developed a generic HT physiologically based TK (HTPBTK) model that predicts non-steady-state chemical concentration time-courses for a variety of exposure scenarios. We used this HTPBTK model to find that assumptions previously used for reverse dosimetry are usually appropriate, except most notably for highly bioaccumulative compounds. For the thousands of man-made chemicals in the environment that currently have no TK data, we propose a 4-element framework for chemical TK triage that can group chemicals into 7 different categories associated with varying levels of confidence in HTTK predictions. For 349 chemicals with literature HTTK data, we differentiated those chemicals for which HTTK approaches are likely to be sufficient, from those that may require additional data. Published by Oxford University Press on behalf of Society of Toxicology 2015. This work is written by US Government employees and is in the public domain in the US.

Entities:  

Keywords:  IVIVE; environmental chemicals; high throughput; toxicokinetics

Mesh:

Substances:

Year:  2015        PMID: 26085347      PMCID: PMC4560038          DOI: 10.1093/toxsci/kfv118

Source DB:  PubMed          Journal:  Toxicol Sci        ISSN: 1096-0929            Impact factor:   4.849


  45 in total

Review 1.  Drug transport proteins in the liver.

Authors:  Klaas Nico Faber; Michael Müller; Peter L M Jansen
Journal:  Adv Drug Deliv Rev       Date:  2003-01-21       Impact factor: 15.470

2.  Comparison of the use of liver models for predicting drug clearance using in vitro kinetic data from hepatic microsomes and isolated hepatocytes.

Authors:  Kiyomi Ito; J Brian Houston
Journal:  Pharm Res       Date:  2004-05       Impact factor: 4.200

3.  Prediction of modified release pharmacokinetics and pharmacodynamics from in vitro, immediate release, and intravenous data.

Authors:  Viera Lukacova; Walter S Woltosz; Michael B Bolger
Journal:  AAPS J       Date:  2009-05-09       Impact factor: 4.009

4.  Evaluation of simple in vitro to in vivo extrapolation approaches for environmental compounds.

Authors:  Miyoung Yoon; Alina Efremenko; Bas J Blaauboer; Harvey J Clewell
Journal:  Toxicol In Vitro       Date:  2013-11-08       Impact factor: 3.500

Review 5.  Membrane transporters in drug development.

Authors:  Kathleen M Giacomini; Shiew-Mei Huang; Donald J Tweedie; Leslie Z Benet; Kim L R Brouwer; Xiaoyan Chu; Amber Dahlin; Raymond Evers; Volker Fischer; Kathleen M Hillgren; Keith A Hoffmaster; Toshihisa Ishikawa; Dietrich Keppler; Richard B Kim; Caroline A Lee; Mikko Niemi; Joseph W Polli; Yuichi Sugiyama; Peter W Swaan; Joseph A Ware; Stephen H Wright; Sook Wah Yee; Maciej J Zamek-Gliszczynski; Lei Zhang
Journal:  Nat Rev Drug Discov       Date:  2010-03       Impact factor: 84.694

6.  Incorporating population variability and susceptible subpopulations into dosimetry for high-throughput toxicity testing.

Authors:  Barbara A Wetmore; Brittany Allen; Harvey J Clewell; Timothy Parker; John F Wambaugh; Lisa M Almond; Mark A Sochaski; Russell S Thomas
Journal:  Toxicol Sci       Date:  2014-08-21       Impact factor: 4.849

7.  Lead- and drug-like compounds: the rule-of-five revolution.

Authors:  Christopher A Lipinski
Journal:  Drug Discov Today Technol       Date:  2004-12

8.  Generation of Bayesian prediction models for OATP-mediated drug-drug interactions based on inhibition screen of OATP1B1, OATP1B1∗15 and OATP1B3.

Authors:  E van de Steeg; J Venhorst; H T Jansen; I H G Nooijen; J DeGroot; H M Wortelboer; M L H Vlaming
Journal:  Eur J Pharm Sci       Date:  2015-01-17       Impact factor: 4.384

9.  Human intestinal transporter database: QSAR modeling and virtual profiling of drug uptake, efflux and interactions.

Authors:  Alexander Sedykh; Denis Fourches; Jianmin Duan; Oliver Hucke; Michel Garneau; Hao Zhu; Pierre Bonneau; Alexander Tropsha
Journal:  Pharm Res       Date:  2012-12-27       Impact factor: 4.200

10.  Human embryonic stem cell-derived test systems for developmental neurotoxicity: a transcriptomics approach.

Authors:  Anne K Krug; Raivo Kolde; John A Gaspar; Eugen Rempel; Nina V Balmer; Kesavan Meganathan; Kinga Vojnits; Mathurin Baquié; Tanja Waldmann; Roberto Ensenat-Waser; Smita Jagtap; Richard M Evans; Stephanie Julien; Hedi Peterson; Dimitra Zagoura; Suzanne Kadereit; Daniel Gerhard; Isaia Sotiriadou; Michael Heke; Karthick Natarajan; Margit Henry; Johannes Winkler; Rosemarie Marchan; Luc Stoppini; Sieto Bosgra; Joost Westerhout; Miriam Verwei; Jaak Vilo; Andreas Kortenkamp; Jürgen Hescheler; Ludwig Hothorn; Susanne Bremer; Christoph van Thriel; Karl-Heinz Krause; Jan G Hengstler; Jörg Rahnenführer; Marcel Leist; Agapios Sachinidis
Journal:  Arch Toxicol       Date:  2012-11-21       Impact factor: 5.153

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  47 in total

1.  Integrated Model of Chemical Perturbations of a Biological Pathway Using 18 In Vitro High-Throughput Screening Assays for the Estrogen Receptor.

Authors:  Richard S Judson; Felicia Maria Magpantay; Vijay Chickarmane; Cymra Haskell; Nessy Tania; Jean Taylor; Menghang Xia; Ruili Huang; Daniel M Rotroff; Dayne L Filer; Keith A Houck; Matthew T Martin; Nisha Sipes; Ann M Richard; Kamel Mansouri; R Woodrow Setzer; Thomas B Knudsen; Kevin M Crofton; Russell S Thomas
Journal:  Toxicol Sci       Date:  2015-08-13       Impact factor: 4.849

2.  Consensus Modeling of Median Chemical Intake for the U.S. Population Based on Predictions of Exposure Pathways.

Authors:  Caroline L Ring; Jon A Arnot; Deborah H Bennett; Peter P Egeghy; Peter Fantke; Lei Huang; Kristin K Isaacs; Olivier Jolliet; Katherine A Phillips; Paul S Price; Hyeong-Moo Shin; John N Westgate; R Woodrow Setzer; John F Wambaugh
Journal:  Environ Sci Technol       Date:  2018-12-24       Impact factor: 9.028

3.  Identifying populations sensitive to environmental chemicals by simulating toxicokinetic variability.

Authors:  Caroline L Ring; Robert G Pearce; R Woodrow Setzer; Barbara A Wetmore; John F Wambaugh
Journal:  Environ Int       Date:  2017-06-16       Impact factor: 9.621

Review 4.  Challenges in working towards an internal threshold of toxicological concern (iTTC) for use in the safety assessment of cosmetics: Discussions from the Cosmetics Europe iTTC Working Group workshop.

Authors:  Corie A Ellison; Karen L Blackburn; Paul L Carmichael; Harvey J Clewell; Mark T D Cronin; Bertrand Desprez; Sylvia E Escher; Steve S Ferguson; Sébastien Grégoire; Nicola J Hewitt; Heli M Hollnagel; Martina Klaric; Atish Patel; Sabrina Salhi; Andreas Schepky; Barbara G Schmitt; John F Wambaugh; Andrew Worth
Journal:  Regul Toxicol Pharmacol       Date:  2019-01-15       Impact factor: 3.271

5.  Completing the Link between Exposure Science and Toxicology for Improved Environmental Health Decision Making: The Aggregate Exposure Pathway Framework.

Authors:  Justin G Teeguarden; Yu-Mei Tan; Stephen W Edwards; Jeremy A Leonard; Kim A Anderson; Richard A Corley; Molly L Kile; Staci M Simonich; David Stone; Robert L Tanguay; Katrina M Waters; Stacey L Harper; David E Williams
Journal:  Environ Sci Technol       Date:  2016-02-10       Impact factor: 9.028

6.  An Intuitive Approach for Predicting Potential Human Health Risk with the Tox21 10k Library.

Authors:  Nisha S Sipes; John F Wambaugh; Robert Pearce; Scott S Auerbach; Barbara A Wetmore; Jui-Hua Hsieh; Andrew J Shapiro; Daniel Svoboda; Michael J DeVito; Stephen S Ferguson
Journal:  Environ Sci Technol       Date:  2017-09-06       Impact factor: 9.028

Review 7.  In vitro to in vivo extrapolation for high throughput prioritization and decision making.

Authors:  Shannon M Bell; Xiaoqing Chang; John F Wambaugh; David G Allen; Mike Bartels; Kim L R Brouwer; Warren M Casey; Neepa Choksi; Stephen S Ferguson; Grazyna Fraczkiewicz; Annie M Jarabek; Alice Ke; Annie Lumen; Scott G Lynn; Alicia Paini; Paul S Price; Caroline Ring; Ted W Simon; Nisha S Sipes; Catherine S Sprankle; Judy Strickland; John Troutman; Barbara A Wetmore; Nicole C Kleinstreuer
Journal:  Toxicol In Vitro       Date:  2017-12-05       Impact factor: 3.500

8.  The Next Generation Blueprint of Computational Toxicology at the U.S. Environmental Protection Agency.

Authors:  Russell S Thomas; Tina Bahadori; Timothy J Buckley; John Cowden; Chad Deisenroth; Kathie L Dionisio; Jeffrey B Frithsen; Christopher M Grulke; Maureen R Gwinn; Joshua A Harrill; Mark Higuchi; Keith A Houck; Michael F Hughes; E Sidney Hunter; Kristin K Isaacs; Richard S Judson; Thomas B Knudsen; Jason C Lambert; Monica Linnenbrink; Todd M Martin; Seth R Newton; Stephanie Padilla; Grace Patlewicz; Katie Paul-Friedman; Katherine A Phillips; Ann M Richard; Reeder Sams; Timothy J Shafer; R Woodrow Setzer; Imran Shah; Jane E Simmons; Steven O Simmons; Amar Singh; Jon R Sobus; Mark Strynar; Adam Swank; Rogelio Tornero-Valez; Elin M Ulrich; Daniel L Villeneuve; John F Wambaugh; Barbara A Wetmore; Antony J Williams
Journal:  Toxicol Sci       Date:  2019-06-01       Impact factor: 4.849

Review 9.  The Impact of Novel Assessment Methodologies in Toxicology on Green Chemistry and Chemical Alternatives.

Authors:  Ivan Rusyn; Nigel Greene
Journal:  Toxicol Sci       Date:  2018-02-01       Impact factor: 4.849

10.  Alternative approaches for acute inhalation toxicity testing to address global regulatory and non-regulatory data requirements: An international workshop report.

Authors:  Amy J Clippinger; David Allen; Annie M Jarabek; Marco Corvaro; Marianna Gaça; Sean Gehen; Jon A Hotchkiss; Grace Patlewicz; Jodie Melbourne; Paul Hinderliter; Miyoung Yoon; Dongeun Huh; Anna Lowit; Barbara Buckley; Michael Bartels; Kelly BéruBé; Daniel M Wilson; Ian Indans; Mathieu Vinken
Journal:  Toxicol In Vitro       Date:  2017-12-22       Impact factor: 3.500

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