Literature DB >> 26072252

An efficient total variation algorithm for super-resolution in fetal brain MRI with adaptive regularization.

Sébastien Tourbier1, Xavier Bresson2, Patric Hagmann3, Jean-Philippe Thiran4, Reto Meuli3, Meritxell Bach Cuadra5.   

Abstract

Although fetal anatomy can be adequately viewed in new multi-slice MR images, many critical limitations remain for quantitative data analysis. To this end, several research groups have recently developed advanced image processing methods, often denoted by super-resolution (SR) techniques, to reconstruct from a set of clinical low-resolution (LR) images, a high-resolution (HR) motion-free volume. It is usually modeled as an inverse problem where the regularization term plays a central role in the reconstruction quality. Literature has been quite attracted by Total Variation energies because of their ability in edge preserving but only standard explicit steepest gradient techniques have been applied for optimization. In a preliminary work, it has been shown that novel fast convex optimization techniques could be successfully applied to design an efficient Total Variation optimization algorithm for the super-resolution problem. In this work, two major contributions are presented. Firstly, we will briefly review the Bayesian and Variational dual formulations of current state-of-the-art methods dedicated to fetal MRI reconstruction. Secondly, we present an extensive quantitative evaluation of our SR algorithm previously introduced on both simulated fetal and real clinical data (with both normal and pathological subjects). Specifically, we study the robustness of regularization terms in front of residual registration errors and we also present a novel strategy for automatically select the weight of the regularization as regards the data fidelity term. Our results show that our TV implementation is highly robust in front of motion artifacts and that it offers the best trade-off between speed and accuracy for fetal MRI recovery as in comparison with state-of-the art methods.
Copyright © 2015 Elsevier Inc. All rights reserved.

Keywords:  Fast convex optimization; Fetal brain MRI; Super-resolution; Total variation

Mesh:

Year:  2015        PMID: 26072252     DOI: 10.1016/j.neuroimage.2015.06.018

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  25 in total

1.  Automated template-based brain localization and extraction for fetal brain MRI reconstruction.

Authors:  Sébastien Tourbier; Clemente Velasco-Annis; Vahid Taimouri; Patric Hagmann; Reto Meuli; Simon K Warfield; Meritxell Bach Cuadra; Ali Gholipour
Journal:  Neuroimage       Date:  2017-04-11       Impact factor: 6.556

2.  Applications of a deep learning method for anti-aliasing and super-resolution in MRI.

Authors:  Can Zhao; Muhan Shao; Aaron Carass; Hao Li; Blake E Dewey; Lotta M Ellingsen; Jonghye Woo; Michael A Guttman; Ari M Blitz; Maureen Stone; Peter A Calabresi; Henry Halperin; Jerry L Prince
Journal:  Magn Reson Imaging       Date:  2019-06-24       Impact factor: 2.546

3.  Adaptive anatomical preservation optimal denoising for radiation therapy daily MRI.

Authors:  Rapeepan Maitree; Gloria J Guzman Perez-Carrillo; Joshua S Shimony; H Michael Gach; Anupama Chundury; Michael Roach; H Harold Li; Deshan Yang
Journal:  J Med Imaging (Bellingham)       Date:  2017-09-01

4.  Gradient-Guided Isotropic MRI Reconstruction from Anisotropic Acquisitions.

Authors:  Yao Sui; Onur Afacan; Camilo Jaimes; Ali Gholipour; Simon K Warfield
Journal:  IEEE Trans Comput Imaging       Date:  2021-11-17

5.  3D Super-Resolution Motion-Corrected MRI: Validation of Fetal Posterior Fossa Measurements.

Authors:  Danielle B Pier; Ali Gholipour; Onur Afacan; Clemente Velasco-Annis; Sean Clancy; Kush Kapur; Judy A Estroff; Simon K Warfield
Journal:  J Neuroimaging       Date:  2016-03-18       Impact factor: 2.486

6.  Deformable Slice-to-Volume Registration for Motion Correction of Fetal Body and Placenta MRI.

Authors:  Alena Uus; Tong Zhang; Laurence H Jackson; Thomas A Roberts; Mary A Rutherford; Joseph V Hajnal; Maria Deprez
Journal:  IEEE Trans Med Imaging       Date:  2020-02-18       Impact factor: 10.048

7.  Longitudinally Guided Super-Resolution of Neonatal Brain Magnetic Resonance Images.

Authors:  Yongqin Zhang; Feng Shi; Jian Cheng; Li Wang; Pew-Thian Yap; Dinggang Shen
Journal:  IEEE Trans Cybern       Date:  2018-01-09       Impact factor: 11.448

8.  3-D Reconstruction in Canonical Co-Ordinate Space From Arbitrarily Oriented 2-D Images.

Authors:  Benjamin Hou; Bishesh Khanal; Amir Alansary; Steven McDonagh; Alice Davidson; Mary Rutherford; Jo V Hajnal; Daniel Rueckert; Ben Glocker; Bernhard Kainz
Journal:  IEEE Trans Med Imaging       Date:  2018-02-19       Impact factor: 10.048

9.  PVR: Patch-to-Volume Reconstruction for Large Area Motion Correction of Fetal MRI.

Authors:  Amir Alansary; Martin Rajchl; Steven G McDonagh; Maria Murgasova; Mellisa Damodaram; David F A Lloyd; Alice Davidson; Mary Rutherford; Joseph V Hajnal; Daniel Rueckert; Bernhard Kainz
Journal:  IEEE Trans Med Imaging       Date:  2017-09-01       Impact factor: 10.048

10.  SMORE: A Self-Supervised Anti-Aliasing and Super-Resolution Algorithm for MRI Using Deep Learning.

Authors:  Can Zhao; Blake E Dewey; Dzung L Pham; Peter A Calabresi; Daniel S Reich; Jerry L Prince
Journal:  IEEE Trans Med Imaging       Date:  2021-03-02       Impact factor: 10.048

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