Literature DB >> 32086200

Deformable Slice-to-Volume Registration for Motion Correction of Fetal Body and Placenta MRI.

Alena Uus, Tong Zhang, Laurence H Jackson, Thomas A Roberts, Mary A Rutherford, Joseph V Hajnal, Maria Deprez.   

Abstract

In in-utero MRI, motion correction for fetal body and placenta poses a particular challenge due to the presence of local non-rigid transformations of organs caused by bending and stretching. The existing slice-to-volume registration (SVR) reconstruction methods are widely employed for motion correction of fetal brain that undergoes only rigid transformation. However, for reconstruction of fetal body and placenta, rigid registration cannot resolve the issue of misregistrations due to deformable motion, resulting in degradation of features in the reconstructed volume. We propose a Deformable SVR (DSVR), a novel approach for non-rigid motion correction of fetal MRI based on a hierarchical deformable SVR scheme to allow high resolution reconstruction of the fetal body and placenta. Additionally, a robust scheme for structure-based rejection of outliers minimises the impact of registration errors. The improved performance of DSVR in comparison to SVR and patch-to-volume registration (PVR) methods is quantitatively demonstrated in simulated experiments and 20 fetal MRI datasets from 28-31 weeks gestational age (GA) range with varying degree of motion corruption. In addition, we present qualitative evaluation of 100 fetal body cases from 20-34 weeks GA range.

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Year:  2020        PMID: 32086200      PMCID: PMC7116020          DOI: 10.1109/TMI.2020.2974844

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  26 in total

1.  Nonrigid registration using free-form deformations: application to breast MR images.

Authors:  D Rueckert; L I Sonoda; C Hayes; D L Hill; M O Leach; D J Hawkes
Journal:  IEEE Trans Med Imaging       Date:  1999-08       Impact factor: 10.048

2.  Image quality assessment: from error visibility to structural similarity.

Authors:  Zhou Wang; Alan Conrad Bovik; Hamid Rahim Sheikh; Eero P Simoncelli
Journal:  IEEE Trans Image Process       Date:  2004-04       Impact factor: 10.856

3.  Robust super-resolution volume reconstruction from slice acquisitions: application to fetal brain MRI.

Authors:  Ali Gholipour; Judy A Estroff; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2010-06-07       Impact factor: 10.048

4.  On super-resolution for fetal brain MRI.

Authors:  F Rousseau; K Kim; C Studholme; M Koob; J L Dietemann
Journal:  Med Image Comput Comput Assist Interv       Date:  2010

5.  Model-based registration of ex vivo and in vivo MRI of the prostate using elastography*.

Authors:  Guy Nir; Ramin S Sahebjavaher; Piotr Kozlowski; Silvia D Chang; Ralph Sinkus; S Larry Goldenberg; Septimiu E Salcudean
Journal:  IEEE Trans Med Imaging       Date:  2013-07       Impact factor: 10.048

Review 6.  Biomechanics of foetal movement.

Authors:  N C Nowlan
Journal:  Eur Cell Mater       Date:  2015-01-02       Impact factor: 3.942

7.  Multi-slice-to-volume registration for MRI-guided transperineal prostate biopsy.

Authors:  Helen Xu; Andras Lasso; Andriy Fedorov; Kemal Tuncali; Clare Tempany; Gabor Fichtinger
Journal:  Int J Comput Assist Radiol Surg       Date:  2014-09-06       Impact factor: 2.924

8.  Distortion Correction in Fetal EPI Using Non-Rigid Registration With a Laplacian Constraint.

Authors:  Maria Kuklisova-Murgasova; Georgia Lockwood Estrin; Rita G Nunes; Shaihan J Malik; Mary A Rutherford; Daniel Rueckert; Joseph V Hajnal
Journal:  IEEE Trans Med Imaging       Date:  2017-02-09       Impact factor: 10.048

9.  Motion corrected 3D reconstruction of the fetal thorax from prenatal MRI.

Authors:  Bernhard Kainz; Christina Malamateniou; Maria Murgasova; Kevin Keraudren; Mary Rutherford; Joseph V Hajnal; Daniel Rueckert
Journal:  Med Image Comput Comput Assist Interv       Date:  2014

10.  Normative biometry of the fetal brain using magnetic resonance imaging.

Authors:  Vanessa Kyriakopoulou; Deniz Vatansever; Alice Davidson; Prachi Patkee; Samia Elkommos; Andrew Chew; Miriam Martinez-Biarge; Bibbi Hagberg; Mellisa Damodaram; Joanna Allsop; Matt Fox; Joseph V Hajnal; Mary A Rutherford
Journal:  Brain Struct Funct       Date:  2016-11-24       Impact factor: 3.270

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  12 in total

1.  Deep Predictive Motion Tracking in Magnetic Resonance Imaging: Application to Fetal Imaging.

Authors:  Ayush Singh; Seyed Sadegh Mohseni Salehi; Ali Gholipour
Journal:  IEEE Trans Med Imaging       Date:  2020-10-28       Impact factor: 10.048

Review 2.  Fetal Neuroimaging Updates.

Authors:  Jeffrey N Stout; M Alejandra Bedoya; P Ellen Grant; Judy A Estroff
Journal:  Magn Reson Imaging Clin N Am       Date:  2021-11       Impact factor: 2.266

3.  3D Isotropic Super-resolution Prostate MRI Using Generative Adversarial Networks and Unpaired Multiplane Slices.

Authors:  Yucheng Liu; Yulin Liu; Rami Vanguri; Daniel Litwiller; Michael Liu; Hao-Yun Hsu; Richard Ha; Hiram Shaish; Sachin Jambawalikar
Journal:  J Digit Imaging       Date:  2021-09-10       Impact factor: 4.903

4.  Brain CT registration using hybrid supervised convolutional neural network.

Authors:  Hongmei Yuan; Minglei Yang; Shan Qian; Wenxin Wang; Xiaotian Jia; Feng Huang
Journal:  Biomed Eng Online       Date:  2021-12-29       Impact factor: 2.819

5.  Super-resolution Reconstruction MRI Application in Fetal Neck Masses and Congenital High Airway Obstruction Syndrome.

Authors:  Nada Mufti; Michael Ebner; Premal Patel; Michael Aertsen; Trevor Gaunt; Paul D Humphries; Fonteini Emmananouella Bredaki; Richard Hewitt; Colin Butler; Magdalena Sokolska; Giles S Kendall; David Atkinson; Tom Vercauteren; Sebastien Ourselin; Pranav P Pandya; Jan Deprest; Andrew Melbourne; Anna L David
Journal:  OTO Open       Date:  2021-10-25

6.  Optimal Method for Fetal Brain Age Prediction Using Multiplanar Slices From Structural Magnetic Resonance Imaging.

Authors:  Jinwoo Hong; Hyuk Jin Yun; Gilsoon Park; Seonggyu Kim; Yangming Ou; Lana Vasung; Caitlin K Rollins; Cynthia M Ortinau; Emiko Takeoka; Shizuko Akiyama; Tomo Tarui; Judy A Estroff; Patricia Ellen Grant; Jong-Min Lee; Kiho Im
Journal:  Front Neurosci       Date:  2021-10-11       Impact factor: 4.677

7.  The Necessity of Magnetic Resonance Imaging in Congenital Diaphragmatic Hernia.

Authors:  Erick George Neștianu; Cristina Guramba Brădeanu; Dragoș Ovidiu Alexandru; Radu Vlădăreanu
Journal:  Diagnostics (Basel)       Date:  2022-07-17

8.  Analysis of 3-Dimensional Arch Anatomy, Vascular Flow, and Postnatal Outcome in Cases of Suspected Coarctation of the Aorta Using Fetal Cardiac Magnetic Resonance Imaging.

Authors:  David F A Lloyd; Milou P M van Poppel; Kuberan Pushparajah; Trisha V Vigneswaran; Vita Zidere; Johannes Steinweg; Joshua F P van Amerom; Thomas A Roberts; Alexander Schulz; Marietta Charakida; Owen Miller; Gurleen Sharland; Mary Rutherford; Joseph V Hajnal; John M Simpson; Reza Razavi
Journal:  Circ Cardiovasc Imaging       Date:  2021-06-30       Impact factor: 7.792

Review 9.  Emerging magnetic resonance imaging techniques in open spina bifida in utero.

Authors:  Andras Jakab; Kelly Payette; Luca Mazzone; Sonja Schauer; Cécile Olivia Muller; Raimund Kottke; Nicole Ochsenbein-Kölble; Ruth Tuura; Ueli Moehrlen; Martin Meuli
Journal:  Eur Radiol Exp       Date:  2021-06-17

10.  Maternal and fetal incidental findings on antenatal magnetic resonance imaging.

Authors:  Lisa Story; Caroline L Knight; Alison Ho; Sophie Arulkumaran; Jacqueline Matthews; Holly Lovell; Laura McCabe; Megan Byrne; Alexia Egloff; Audrey E T Jacques; Jim Carmichael; Jo Hajnal; Andrew Shennan; Mary Rutherford
Journal:  Pediatr Radiol       Date:  2021-05-27
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