Literature DB >> 26049420

Focus: Two-dimensional electron-electron double resonance and molecular motions: The challenge of higher frequencies.

John M Franck1, Siddarth Chandrasekaran1, Boris Dzikovski1, Curt R Dunnam1, Jack H Freed1.   

Abstract

The development, applications, and current challenges of the pulsed ESR technique of two-dimensional Electron-Electron Double Resonance (2D ELDOR) are described. This is a three-pulse technique akin to 2D Exchange Nuclear Magnetic Resonance, but involving electron spins, usually in the form of spin-probes or spin-labels. As a result, it required the extension to much higher frequencies, i.e., microwaves, and much faster time scales, with π/2 pulses in the 2-3 ns range. It has proven very useful for studying molecular dynamics in complex fluids, and spectral results can be explained by fitting theoretical models (also described) that provide a detailed analysis of the molecular dynamics and structure. We discuss concepts that also appear in other forms of 2D spectroscopy but emphasize the unique advantages and difficulties that are intrinsic to ESR. Advantages include the ability to tune the resonance frequency, in order to probe different motional ranges, while challenges include the high ratio of the detection dead time vs. the relaxation times. We review several important 2D ELDOR studies of molecular dynamics. (1) The results from a spin probe dissolved in a liquid crystal are followed throughout the isotropic → nematic → liquid-like smectic → solid-like smectic → crystalline phases as the temperature is reduced and are interpreted in terms of the slowly relaxing local structure model. Here, the labeled molecule is undergoing overall motion in the macroscopically aligned sample, as well as responding to local site fluctuations. (2) Several examples involving model phospholipid membranes are provided, including the dynamic structural characterization of the boundary lipid that coats a transmembrane peptide dimer. Additionally, subtle differences can be elicited for the phospholipid membrane phases: liquid disordered, liquid ordered, and gel, and the subtle effects upon the membrane, of antigen cross-linking of receptors on the surface of plasma membrane, vesicles can be observed. These 2D ELDOR experiments are performed as a function of mixing time, Tm, i.e., the time between the second and third π/2 pulses, which provides a third dimension. In fact, a fourth dimension may be added by varying the ESR frequency/magnetic field combination. Therefore, (3) it is shown how continuous-wave multifrequency ESR studies enable the decomposition of complex dynamics of, e.g., proteins by virtue of their respective time scales. These studies motivate our current efforts that are directed to extend 2D ELDOR to higher frequencies, 95 GHz in particular (from 9 and 17 GHz), in order to enable multi-frequency 2D ELDOR. This required the development of quasi-optical methods for performing the mm-wave experiments, which are summarized. We demonstrate state-of-the-art 95 GHz 2D ELDOR spectroscopy through its ability to resolve the two signals from a spin probe dissolved in both the lipid phase and the coexisting aqueous phase. As current 95 GHz experiments are restricted by limited spectral coverage of the π/2 pulse, as well as the very short T2 relaxation times of the electron spins, we discuss how these limitations are being addressed.

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Year:  2015        PMID: 26049420      PMCID: PMC4443839          DOI: 10.1063/1.4917322

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  24 in total

Review 1.  New technologies in electron spin resonance.

Authors:  J H Freed
Journal:  Annu Rev Phys Chem       Date:  2000       Impact factor: 12.703

2.  High-frequency ESR at ACERT.

Authors:  Keith A Earle; Boris Dzikovski; Wulf Hofbauer; Jozef K Moscicki; Jack H Freed
Journal:  Magn Reson Chem       Date:  2005-11       Impact factor: 2.447

3.  2D-ELDOR using full S(c-) fitting and absorption lineshapes.

Authors:  Yun-Wei Chiang; Antonio Costa-Filho; Jack H Freed
Journal:  J Magn Reson       Date:  2007-07-13       Impact factor: 2.229

Review 4.  Conformational dynamics and distribution of nitroxide spin labels.

Authors:  Gunnar Jeschke
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2013-04-18       Impact factor: 9.795

5.  A new Lanczos-based algorithm for simulating high-frequency two-dimensional electron spin resonance spectra.

Authors:  Yun-Wei Chiang; Jack H Freed
Journal:  J Chem Phys       Date:  2011-01-21       Impact factor: 3.488

6.  Multifrequency electron spin resonance study of the dynamics of spin labeled T4 lysozyme.

Authors:  Ziwei Zhang; Mark R Fleissner; Dmitriy S Tipikin; Zhichun Liang; Jozef K Moscicki; Keith A Earle; Wayne L Hubbell; Jack H Freed
Journal:  J Phys Chem B       Date:  2010-04-29       Impact factor: 2.991

7.  Time-resolved detection of structural changes during the photocycle of spin-labeled bacteriorhodopsin.

Authors:  H J Steinhoff; R Mollaaghababa; C Altenbach; K Hideg; M Krebs; H G Khorana; W L Hubbell
Journal:  Science       Date:  1994-10-07       Impact factor: 47.728

Review 8.  Technological advances in site-directed spin labeling of proteins.

Authors:  Wayne L Hubbell; Carlos J López; Christian Altenbach; Zhongyu Yang
Journal:  Curr Opin Struct Biol       Date:  2013-07-11       Impact factor: 6.809

9.  Lipid-gramicidin interactions: dynamic structure of the boundary lipid by 2D-ELDOR.

Authors:  Antonio J Costa-Filho; Richard H Crepeau; Petr P Borbat; Mingtao Ge; Jack H Freed
Journal:  Biophys J       Date:  2003-05       Impact factor: 4.033

10.  Multifrequency electron spin resonance spectra of a spin-labeled protein calculated from molecular dynamics simulations.

Authors:  Deniz Sezer; Jack H Freed; Benoît Roux
Journal:  J Am Chem Soc       Date:  2009-02-25       Impact factor: 15.419

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  4 in total

1.  Microsecond dynamics in proteins by two-dimensional ESR: Predictions.

Authors:  Pranav Gupta; Zhichun Liang; Jack H Freed
Journal:  J Chem Phys       Date:  2020-06-07       Impact factor: 3.488

Review 2.  Regulation of membrane protein structure and function by their lipid nano-environment.

Authors:  Ilya Levental; Ed Lyman
Journal:  Nat Rev Mol Cell Biol       Date:  2022-09-02       Impact factor: 113.915

3.  Microsecond dynamics in proteins by two-dimensional ESR. II. Addressing computational challenges.

Authors:  Pranav Gupta; Kevin Chaudhari; Jack H Freed
Journal:  J Chem Phys       Date:  2021-02-28       Impact factor: 3.488

4.  Microsecond Exchange Processes Studied by Two-Dimensional ESR at 95 GHz.

Authors:  Boris Dzikovski; Valery V Khramtsov; Siddarth Chandrasekaran; Curt Dunnam; Meera Shah; Jack H Freed
Journal:  J Am Chem Soc       Date:  2020-12-11       Impact factor: 15.419

  4 in total

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