Literature DB >> 26034410

On the Nature and Evolutionary Impact of Phenotypic Robustness Mechanisms.

Mark L Siegal1, Jun-Yi Leu2.   

Abstract

Biologists have long observed that physiological and developmental processes are insensitive, or robust, to many genetic and environmental perturbations. A complete understanding of the evolutionary causes and consequences of this robustness is lacking. Recent progress has been made in uncovering the regulatory mechanisms that underlie environmental robustness in particular. Less is known about robustness to the effects of mutations, and indeed the evolution of mutational robustness remains a controversial topic. The controversy has spread to related topics, in particular the evolutionary relevance of cryptic genetic variation. This review aims to synthesize current understanding of robustness mechanisms and to cut through the controversy by shedding light on what is and is not known about mutational robustness. Some studies have confused mutational robustness with non-additive interactions between mutations (epistasis). We conclude that a profitable way forward is to focus investigations (and rhetoric) less on mutational robustness and more on epistasis.

Entities:  

Keywords:  canalization; conditional neutrality; cryptic genetic variation; epistasis; genotype networks; macroenvironmental variation; microenvironmental variation; mutational robustness; phenotypic plasticity

Year:  2014        PMID: 26034410      PMCID: PMC4448758          DOI: 10.1146/annurev-ecolsys-120213-091705

Source DB:  PubMed          Journal:  Annu Rev Ecol Evol Syst        ISSN: 1543-592X            Impact factor:   13.915


  120 in total

1.  Neutral evolution of mutational robustness.

Authors:  E van Nimwegen; J P Crutchfield; M Huynen
Journal:  Proc Natl Acad Sci U S A       Date:  1999-08-17       Impact factor: 11.205

2.  Regulation of noise in the expression of a single gene.

Authors:  Ertugrul M Ozbudak; Mukund Thattai; Iren Kurtser; Alan D Grossman; Alexander van Oudenaarden
Journal:  Nat Genet       Date:  2002-04-22       Impact factor: 38.330

Review 3.  GroEL and the maintenance of bacterial endosymbiosis.

Authors:  Mario Ali Fares; Andrés Moya; Eladio Barrio
Journal:  Trends Genet       Date:  2004-09       Impact factor: 11.639

Review 4.  Canalization of development by microRNAs.

Authors:  Eran Hornstein; Noam Shomron
Journal:  Nat Genet       Date:  2006-06       Impact factor: 38.330

5.  Codon usage and selection on proteins.

Authors:  Joshua B Plotkin; Jonathan Dushoff; Michael M Desai; Hunter B Fraser
Journal:  J Mol Evol       Date:  2006-10-14       Impact factor: 2.395

6.  Hsp90 prevents phenotypic variation by suppressing the mutagenic activity of transposons.

Authors:  Valeria Specchia; Lucia Piacentini; Patrizia Tritto; Laura Fanti; Rosalba D'Alessandro; Gioacchino Palumbo; Sergio Pimpinelli; Maria P Bozzetti
Journal:  Nature       Date:  2010-01-10       Impact factor: 49.962

7.  The spontaneous appearance rate of the yeast prion [PSI+] and its implications for the evolution of the evolvability properties of the [PSI+] system.

Authors:  Alex K Lancaster; J Patrick Bardill; Heather L True; Joanna Masel
Journal:  Genetics       Date:  2009-11-16       Impact factor: 4.562

8.  The robustness continuum.

Authors:  Sasha F Levy; Mark L Siegal
Journal:  Adv Exp Med Biol       Date:  2012       Impact factor: 2.622

9.  miR-9a minimizes the phenotypic impact of genomic diversity by buffering a transcription factor.

Authors:  Justin J Cassidy; Aashish R Jha; Diana M Posadas; Ritika Giri; Koen J T Venken; Jingran Ji; Hongmei Jiang; Hugo J Bellen; Kevin P White; Richard W Carthew
Journal:  Cell       Date:  2013-12-19       Impact factor: 41.582

10.  The evolution of the evolvability properties of the yeast prion [PSI+].

Authors:  Joanna Masel; Aviv Bergman
Journal:  Evolution       Date:  2003-07       Impact factor: 3.694

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  27 in total

1.  Differential Masking of Natural Genetic Variation by miR-9a in Drosophila.

Authors:  Justin J Cassidy; Alexander J Straughan; Richard W Carthew
Journal:  Genetics       Date:  2015-11-27       Impact factor: 4.562

2.  Determining the factors driving selective effects of new nonsynonymous mutations.

Authors:  Christian D Huber; Bernard Y Kim; Clare D Marsden; Kirk E Lohmueller
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-11       Impact factor: 11.205

3.  Molecular genetics: Chaperone protein gets personal.

Authors:  Mark L Siegal
Journal:  Nature       Date:  2017-04-19       Impact factor: 49.962

4.  Heritable Micro-environmental Variance Covaries with Fitness in an Outbred Population of Drosophila serrata.

Authors:  Jacqueline L Sztepanacz; Katrina McGuigan; Mark W Blows
Journal:  Genetics       Date:  2017-06-22       Impact factor: 4.562

Review 5.  The sources of adaptive variation.

Authors:  Deborah Charlesworth; Nicholas H Barton; Brian Charlesworth
Journal:  Proc Biol Sci       Date:  2017-05-31       Impact factor: 5.349

6.  Effects of mutation and selection on plasticity of a promoter activity in Saccharomyces cerevisiae.

Authors:  Fabien Duveau; David C Yuan; Brian P H Metzger; Andrea Hodgins-Davis; Patricia J Wittkopp
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-19       Impact factor: 11.205

Review 7.  Genetic suppression: Extending our knowledge from lab experiments to natural populations.

Authors:  Takeshi Matsui; Jonathan T Lee; Ian M Ehrenreich
Journal:  Bioessays       Date:  2017-05-04       Impact factor: 4.345

Review 8.  Co-opting evo-devo concepts for new insights into mechanisms of behavioural diversity.

Authors:  Kim L Hoke; Elizabeth Adkins-Regan; Andrew H Bass; Amy R McCune; Mariana F Wolfner
Journal:  J Exp Biol       Date:  2019-04-15       Impact factor: 3.312

9.  Genetic basis of a spontaneous mutation's expressivity.

Authors:  Rachel Schell; Joseph J Hale; Martin N Mullis; Takeshi Matsui; Ryan Foree; Ian M Ehrenreich
Journal:  Genetics       Date:  2022-03-03       Impact factor: 4.562

10.  Regulatory mechanisms link phenotypic plasticity to evolvability.

Authors:  Jordi van Gestel; Franz J Weissing
Journal:  Sci Rep       Date:  2016-04-18       Impact factor: 4.379

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