Literature DB >> 26033429

Tobramycin Variants with Enhanced Ribosome-Targeting Activity.

Marina Y Fosso1, Hongkun Zhu2, Keith D Green1, Sylvie Garneau-Tsodikova3, Kurt Fredrick4.   

Abstract

With the increased evolution of aminoglycoside (AG)-resistant bacterial strains, the need to develop AGs with 1) enhanced antimicrobial activity, 2) the ability to evade resistance mechanisms, and 3) the capability of targeting the ribosome with higher efficiency is more and more pressing. The chemical derivatization of the naturally occurring tobramycin (TOB) by attachment of 37 different thioether groups at the 6''-position led to the identification of generally poorer substrates of TOB-targeting AG-modifying enzymes (AMEs). Thirteen of these displayed better antibacterial activity than the parent TOB while retaining ribosome-targeting specificity. Analysis of these compounds in vitro shed light on the mechanism by which they act and revealed three with clearly enhanced ribosome-targeting activity.
© 2015 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  aminoglycoside; antibacterial agents; bacterial resistance; drug-modifying enzymes; translocation

Mesh:

Substances:

Year:  2015        PMID: 26033429      PMCID: PMC4548982          DOI: 10.1002/cbic.201500256

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  43 in total

1.  Conformational switch in the decoding region of 16S rRNA during aminoacyl-tRNA selection on the ribosome.

Authors:  T Pape; W Wintermeyer; M V Rodnina
Journal:  Nat Struct Biol       Date:  2000-02

2.  Recognition of cognate transfer RNA by the 30S ribosomal subunit.

Authors:  J M Ogle; D E Brodersen; W M Clemons ; M J Tarry; A P Carter; V Ramakrishnan
Journal:  Science       Date:  2001-05-04       Impact factor: 47.728

3.  A small molecule discrimination map of the antibiotic resistance kinome.

Authors:  Tushar Shakya; Peter J Stogios; Nicholas Waglechner; Elena Evdokimova; Linda Ejim; Jan E Blanchard; Andrew G McArthur; Alexei Savchenko; Gerard D Wright
Journal:  Chem Biol       Date:  2011-12-23

4.  Design, synthesis, and antibacterial activities of conformationally constrained kanamycin A derivatives.

Authors:  Wenxuan Zhang; Ying Chen; Qingzhao Liang; Hui Li; Hongwei Jin; Liangren Zhang; Xiangbao Meng; Zhongjun Li
Journal:  J Org Chem       Date:  2012-12-18       Impact factor: 4.354

5.  Substrate promiscuity of an aminoglycoside antibiotic resistance enzyme via target mimicry.

Authors:  Desiree H Fong; Albert M Berghuis
Journal:  EMBO J       Date:  2002-05-15       Impact factor: 11.598

6.  Effects of altering aminoglycoside structures on bacterial resistance enzyme activities.

Authors:  Keith D Green; Wenjing Chen; Sylvie Garneau-Tsodikova
Journal:  Antimicrob Agents Chemother       Date:  2011-05-02       Impact factor: 5.191

7.  Structural basis for aminoglycoside inhibition of bacterial ribosome recycling.

Authors:  Maria A Borovinskaya; Raj D Pai; Wen Zhang; Barbara S Schuwirth; James M Holton; Go Hirokawa; Hideko Kaji; Akira Kaji; Jamie H Doudna Cate
Journal:  Nat Struct Mol Biol       Date:  2007-07-29       Impact factor: 15.369

8.  Control of translation initiation involves a factor-induced rearrangement of helix 44 of 16S ribosomal RNA.

Authors:  Daoming Qin; Kurt Fredrick
Journal:  Mol Microbiol       Date:  2009-01-16       Impact factor: 3.501

9.  Synthesis and evaluation of hetero- and homodimers of ribosome-targeting antibiotics: antimicrobial activity, in vitro inhibition of translation, and drug resistance.

Authors:  Yifat Berkov-Zrihen; Keith D Green; Kristin J Labby; Mark Feldman; Sylvie Garneau-Tsodikova; Micha Fridman
Journal:  J Med Chem       Date:  2013-07-01       Impact factor: 7.446

10.  4'-O-substitutions determine selectivity of aminoglycoside antibiotics.

Authors:  Déborah Perez-Fernandez; Dmitri Shcherbakov; Tanja Matt; Ng Chyan Leong; Iwona Kudyba; Stefan Duscha; Heithem Boukari; Rashmi Patak; Srinivas Reddy Dubbaka; Kathrin Lang; Martin Meyer; Rashid Akbergenov; Pietro Freihofer; Swapna Vaddi; Pia Thommes; V Ramakrishnan; Andrea Vasella; Erik C Böttger
Journal:  Nat Commun       Date:  2014       Impact factor: 14.919

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  9 in total

1.  A review of patents (2011-2015) towards combating resistance to and toxicity of aminoglycosides.

Authors:  Nishad Thamban Chandrika; Sylvie Garneau-Tsodikova
Journal:  Medchemcomm       Date:  2015-11-19       Impact factor: 3.597

Review 2.  Comprehensive review of chemical strategies for the preparation of new aminoglycosides and their biological activities.

Authors:  Nishad Thamban Chandrika; Sylvie Garneau-Tsodikova
Journal:  Chem Soc Rev       Date:  2018-02-19       Impact factor: 54.564

3.  Mechanisms of Resistance to Aminoglycoside Antibiotics: Overview and Perspectives.

Authors:  Sylvie Garneau-Tsodikova; Kristin J Labby
Journal:  Medchemcomm       Date:  2015-09-21       Impact factor: 3.597

4.  Synthesis and Biological Activity of Mono- and Di-N-acylated Aminoglycosides.

Authors:  Nishad Thamban Chandrika; Keith D Green; Jacob L Houghton; Sylvie Garneau-Tsodikova
Journal:  ACS Med Chem Lett       Date:  2015-09-30       Impact factor: 4.345

5.  Synthesis and Bioactivities of Kanamycin B-Derived Cationic Amphiphiles.

Authors:  Marina Y Fosso; Sanjib K Shrestha; Keith D Green; Sylvie Garneau-Tsodikova
Journal:  J Med Chem       Date:  2015-12-01       Impact factor: 7.446

6.  Differential Effects of Linkers on the Activity of Amphiphilic Tobramycin Antifungals.

Authors:  Marina Y Fosso; Sanjib K Shrestha; Nishad Thamban Chandrika; Emily K Dennis; Keith D Green; Sylvie Garneau-Tsodikova
Journal:  Molecules       Date:  2018-04-13       Impact factor: 4.411

7.  Roles of specific aminoglycoside-ribosome interactions in the inhibition of translation.

Authors:  Lanqing Ying; Hongkun Zhu; Shinichiro Shoji; Kurt Fredrick
Journal:  RNA       Date:  2018-11-09       Impact factor: 4.942

8.  Selective Modification of Streptozotocin at the C3 Position to Improve Its Bioactivity as Antibiotic and Reduce Its Cytotoxicity towards Insulin-Producing β Cells.

Authors:  Ji Zhang; Liubov Yakovlieva; Bart J de Haan; Paul de Vos; Adriaan J Minnaard; Martin D Witte; Marthe T C Walvoort
Journal:  Antibiotics (Basel)       Date:  2020-04-15

9.  Modified Aminoglycosides Bind Nucleic Acids in High-Molecular-Weight Complexes.

Authors:  Lanqing Ying; Hongkun Zhu; Marina Y Fosso; Sylvie Garneau-Tsodikova; Kurt Fredrick
Journal:  Antibiotics (Basel)       Date:  2020-02-21
  9 in total

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