Literature DB >> 26022416

GENE SILENCING. Epigenetic silencing by the HUSH complex mediates position-effect variegation in human cells.

Iva A Tchasovnikarova1, Richard T Timms1, Nicholas J Matheson1, Kim Wals1, Robin Antrobus1, Berthold Göttgens2, Gordon Dougan3, Mark A Dawson4, Paul J Lehner1.   

Abstract

Forward genetic screens in Drosophila melanogaster for modifiers of position-effect variegation have revealed the basis of much of our understanding of heterochromatin. We took an analogous approach to identify genes required for epigenetic repression in human cells. A nonlethal forward genetic screen in near-haploid KBM7 cells identified the HUSH (human silencing hub) complex, comprising three poorly characterized proteins, TASOR, MPP8, and periphilin; this complex is absent from Drosophila but is conserved from fish to humans. Loss of HUSH components resulted in decreased H3K9me3 both at endogenous genomic loci and at retroviruses integrated into heterochromatin. Our results suggest that the HUSH complex is recruited to genomic loci rich in H3K9me3, where subsequent recruitment of the methyltransferase SETDB1 is required for further H3K9me3 deposition to maintain transcriptional silencing.
Copyright © 2015, American Association for the Advancement of Science.

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Year:  2015        PMID: 26022416      PMCID: PMC4487827          DOI: 10.1126/science.aaa7227

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  28 in total

1.  SETDB1: a novel KAP-1-associated histone H3, lysine 9-specific methyltransferase that contributes to HP1-mediated silencing of euchromatic genes by KRAB zinc-finger proteins.

Authors:  David C Schultz; Kasirajan Ayyanathan; Dmitri Negorev; Gerd G Maul; Frank J Rauscher
Journal:  Genes Dev       Date:  2002-04-15       Impact factor: 11.361

Review 2.  Position-effect variegation and the genetic dissection of chromatin regulation in Drosophila.

Authors:  Gunnar Schotta; Anja Ebert; Rainer Dorn; Gunter Reuter
Journal:  Semin Cell Dev Biol       Date:  2003-02       Impact factor: 7.727

3.  Identification of a nonhistone chromosomal protein associated with heterochromatin in Drosophila melanogaster and its gene.

Authors:  T C James; S C Elgin
Journal:  Mol Cell Biol       Date:  1986-11       Impact factor: 4.272

4.  HIV reproducibly establishes a latent infection after acute infection of T cells in vitro.

Authors:  Albert Jordan; Dwayne Bisgrove; Eric Verdin
Journal:  EMBO J       Date:  2003-04-15       Impact factor: 11.598

5.  Selective recognition of methylated lysine 9 on histone H3 by the HP1 chromo domain.

Authors:  A J Bannister; P Zegerman; J F Partridge; E A Miska; J O Thomas; R C Allshire; T Kouzarides
Journal:  Nature       Date:  2001-03-01       Impact factor: 49.962

6.  High-level transduction and gene expression in hematopoietic repopulating cells using a human immunodeficiency [correction of imunodeficiency] virus type 1-based lentiviral vector containing an internal spleen focus forming virus promoter.

Authors:  Christophe Demaison; Kathryn Parsley; Gaby Brouns; Michaela Scherr; Karin Battmer; Christine Kinnon; Manuel Grez; Adrian J Thrasher
Journal:  Hum Gene Ther       Date:  2002-05-01       Impact factor: 5.695

7.  The site of HIV-1 integration in the human genome determines basal transcriptional activity and response to Tat transactivation.

Authors:  A Jordan; P Defechereux; E Verdin
Journal:  EMBO J       Date:  2001-04-02       Impact factor: 11.598

8.  Overexpression of CR/periphilin downregulates Cdc7 expression and induces S-phase arrest.

Authors:  Megumi Kurita; Hiroaki Suzuki; Hisao Masai; Kiyohisa Mizumoto; Etsuro Ogata; Ikuo Nishimoto; Sadakazu Aiso; Masaaki Matsuoka
Journal:  Biochem Biophys Res Commun       Date:  2004-11-12       Impact factor: 3.575

9.  Tumor necrosis factor alpha activates human immunodeficiency virus type 1 through induction of nuclear factor binding to the NF-kappa B sites in the long terminal repeat.

Authors:  E J Duh; W J Maury; T M Folks; A S Fauci; A B Rabson
Journal:  Proc Natl Acad Sci U S A       Date:  1989-08       Impact factor: 11.205

10.  Application of histone modification-specific interaction domains as an alternative to antibodies.

Authors:  Goran Kungulovski; Ina Kycia; Raluca Tamas; Renata Z Jurkowska; Srikanth Kudithipudi; Chisato Henry; Richard Reinhardt; Paul Labhart; Albert Jeltsch
Journal:  Genome Res       Date:  2014-10-09       Impact factor: 9.043

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  111 in total

1.  Identification and characterization of essential genes in the human genome.

Authors:  Tim Wang; Kıvanç Birsoy; Nicholas W Hughes; Kevin M Krupczak; Yorick Post; Jenny J Wei; Eric S Lander; David M Sabatini
Journal:  Science       Date:  2015-10-15       Impact factor: 47.728

Review 2.  Epigenetic fates of gene silencing established by heterochromatin spreading in cell identity and genome stability.

Authors:  R A Greenstein; Bassem Al-Sady
Journal:  Curr Genet       Date:  2018-11-02       Impact factor: 3.886

3.  Causal Gene Regulatory Network Modeling and Genomics: Second-Generation Challenges.

Authors:  Ellen V Rothenberg
Journal:  J Comput Biol       Date:  2019-05-07       Impact factor: 1.479

Review 4.  The molecular basis of the organization of repetitive DNA-containing constitutive heterochromatin in mammals.

Authors:  Gohei Nishibuchi; Jérôme Déjardin
Journal:  Chromosome Res       Date:  2017-01-11       Impact factor: 5.239

5.  Efficient and Reproducible Multigene Expression after Single-Step Transfection Using Improved BAC Transgenesis and Engineering Toolkit.

Authors:  Binhui Zhao; Pankaj Chaturvedi; David L Zimmerman; Andrew S Belmont
Journal:  ACS Synth Biol       Date:  2020-04-13       Impact factor: 5.110

6.  Genomic and Proteomic Resolution of Heterochromatin and Its Restriction of Alternate Fate Genes.

Authors:  Justin S Becker; Ryan L McCarthy; Simone Sidoli; Greg Donahue; Kelsey E Kaeding; Zhiying He; Shu Lin; Benjamin A Garcia; Kenneth S Zaret
Journal:  Mol Cell       Date:  2017-12-21       Impact factor: 17.970

Review 7.  Ten principles of heterochromatin formation and function.

Authors:  Robin C Allshire; Hiten D Madhani
Journal:  Nat Rev Mol Cell Biol       Date:  2017-12-13       Impact factor: 94.444

8.  Mapping the chemical chromatin reactivation landscape identifies BRD4-TAF1 cross-talk.

Authors:  Sara Sdelci; Charles-Hugues Lardeau; Cynthia Tallant; Freya Klepsch; Björn Klaiber; James Bennett; Philipp Rathert; Michael Schuster; Thomas Penz; Oleg Fedorov; Giulio Superti-Furga; Christoph Bock; Johannes Zuber; Kilian V M Huber; Stefan Knapp; Susanne Müller; Stefan Kubicek
Journal:  Nat Chem Biol       Date:  2016-05-09       Impact factor: 15.040

9.  TRIM28 promotes HIV-1 latency by SUMOylating CDK9 and inhibiting P-TEFb.

Authors:  Xiancai Ma; Tao Yang; Yuewen Luo; Liyang Wu; Yawen Jiang; Zheng Song; Ting Pan; Bingfeng Liu; Guangyan Liu; Jun Liu; Fei Yu; Zhangping He; Wanying Zhang; Jinyu Yang; Liting Liang; Yuanjun Guan; Xu Zhang; Linghua Li; Weiping Cai; Xiaoping Tang; Song Gao; Kai Deng; Hui Zhang
Journal:  Elife       Date:  2019-01-17       Impact factor: 8.140

Review 10.  Antiviral resistance of stem cells.

Authors:  Xianfang Wu; Andrew C Kwong; Charles M Rice
Journal:  Curr Opin Immunol       Date:  2018-10-20       Impact factor: 7.486

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