Literature DB >> 27159579

Mapping the chemical chromatin reactivation landscape identifies BRD4-TAF1 cross-talk.

Sara Sdelci1, Charles-Hugues Lardeau1,2, Cynthia Tallant3,4, Freya Klepsch1, Björn Klaiber1, James Bennett3,4, Philipp Rathert5, Michael Schuster1, Thomas Penz1, Oleg Fedorov3,4, Giulio Superti-Furga1,6, Christoph Bock1,7,8, Johannes Zuber5, Kilian V M Huber1,3,4, Stefan Knapp3,4,9, Susanne Müller3,4, Stefan Kubicek1,2.   

Abstract

Bromodomain-containing proteins of the BET family recognize histone lysine acetylation and mediate transcriptional activation of target genes such as the MYC oncogene. Pharmacological inhibitors of BET domains promise therapeutic benefits in a variety of cancers. We performed a high-diversity chemical compound screen for agents capable of modulating BRD4-dependent heterochromatization of a generic reporter in human cells. In addition to known and new compounds targeting BRD4, we identified small molecules that mimic BRD4 inhibition without direct engagement. One such compound was a potent inhibitor of the second bromodomain of TAF1. Using this inhibitor, we discovered that TAF1 synergizes with BRD4 to control proliferation of cancer cells, making TAF1 an attractive epigenetic target in cancers driven by MYC.

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Year:  2016        PMID: 27159579     DOI: 10.1038/nchembio.2080

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  52 in total

1.  A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays.

Authors: 
Journal:  J Biomol Screen       Date:  1999

Review 2.  Targeting bromodomains: epigenetic readers of lysine acetylation.

Authors:  Panagis Filippakopoulos; Stefan Knapp
Journal:  Nat Rev Drug Discov       Date:  2014-04-22       Impact factor: 84.694

3.  BET bromodomain inhibition as a novel strategy for reactivation of HIV-1.

Authors:  Camellia Banerjee; Nancie Archin; Daniel Michaels; Anna C Belkina; Gerald V Denis; James Bradner; Paola Sebastiani; David M Margolis; Monty Montano
Journal:  J Leukoc Biol       Date:  2012-07-16       Impact factor: 4.962

Review 4.  More pieces to the puzzle: recent structural insights into class II transcription initiation.

Authors:  Eaazhisai Kandiah; Simon Trowitzsch; Kapil Gupta; Matthias Haffke; Imre Berger
Journal:  Curr Opin Struct Biol       Date:  2014-01-16       Impact factor: 6.809

5.  Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles.

Authors:  Aravind Subramanian; Pablo Tamayo; Vamsi K Mootha; Sayan Mukherjee; Benjamin L Ebert; Michael A Gillette; Amanda Paulovich; Scott L Pomeroy; Todd R Golub; Eric S Lander; Jill P Mesirov
Journal:  Proc Natl Acad Sci U S A       Date:  2005-09-30       Impact factor: 11.205

6.  Generation of a Selective Small Molecule Inhibitor of the CBP/p300 Bromodomain for Leukemia Therapy.

Authors:  Sarah Picaud; Oleg Fedorov; Angeliki Thanasopoulou; Katharina Leonards; Katherine Jones; Julia Meier; Heidi Olzscha; Octovia Monteiro; Sarah Martin; Martin Philpott; Anthony Tumber; Panagis Filippakopoulos; Clarence Yapp; Christopher Wells; Ka Hing Che; Andrew Bannister; Samuel Robson; Umesh Kumar; Nigel Parr; Kevin Lee; Dave Lugo; Philip Jeffrey; Simon Taylor; Matteo L Vecellio; Chas Bountra; Paul E Brennan; Alison O'Mahony; Sharlene Velichko; Susanne Müller; Duncan Hay; Danette L Daniels; Marjeta Urh; Nicholas B La Thangue; Tony Kouzarides; Rab Prinjha; Jürg Schwaller; Stefan Knapp
Journal:  Cancer Res       Date:  2015-11-09       Impact factor: 12.701

7.  Dual kinase-bromodomain inhibitors for rationally designed polypharmacology.

Authors:  Pietro Ciceri; Susanne Müller; Alison O'Mahony; Oleg Fedorov; Panagis Filippakopoulos; Jeremy P Hunt; Elisabeth A Lasater; Gabriel Pallares; Sarah Picaud; Christopher Wells; Sarah Martin; Lisa M Wodicka; Neil P Shah; Daniel K Treiber; Stefan Knapp
Journal:  Nat Chem Biol       Date:  2014-03-02       Impact factor: 15.040

8.  TopHat2: accurate alignment of transcriptomes in the presence of insertions, deletions and gene fusions.

Authors:  Daehwan Kim; Geo Pertea; Cole Trapnell; Harold Pimentel; Ryan Kelley; Steven L Salzberg
Journal:  Genome Biol       Date:  2013-04-25       Impact factor: 13.583

9.  Bromodomain protein BRD4 is required for estrogen receptor-dependent enhancer activation and gene transcription.

Authors:  Sankari Nagarajan; Tareq Hossan; Malik Alawi; Zeynab Najafova; Daniela Indenbirken; Upasana Bedi; Hanna Taipaleenmäki; Isabel Ben-Batalla; Marina Scheller; Sonja Loges; Stefan Knapp; Eric Hesse; Cheng-Ming Chiang; Adam Grundhoff; Steven A Johnsen
Journal:  Cell Rep       Date:  2014-07-10       Impact factor: 9.423

10.  CBP30, a selective CBP/p300 bromodomain inhibitor, suppresses human Th17 responses.

Authors:  Ariane Hammitzsch; Cynthia Tallant; Oleg Fedorov; Alison O'Mahony; Paul E Brennan; Duncan A Hay; Fernando O Martinez; M Hussein Al-Mossawi; Jelle de Wit; Matteo Vecellio; Christopher Wells; Paul Wordsworth; Susanne Müller; Stefan Knapp; Paul Bowness
Journal:  Proc Natl Acad Sci U S A       Date:  2015-08-10       Impact factor: 11.205

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  16 in total

1.  Chromatin targeting: A BET inhibitor workaround.

Authors:  Christopher J Burns
Journal:  Nat Chem Biol       Date:  2016-06-17       Impact factor: 15.040

2.  Induction of apoptosis and downregulation of ERα in DMBA-induced mammary gland tumors in Sprague-Dawley rats by synthetic 3,5-disubstituted isoxazole derivatives.

Authors:  Hanumappa Ananda; Kothanahally S Sharath Kumar; Mahesh Hegde; Kanchugarakoppal S Rangappa
Journal:  Mol Cell Biochem       Date:  2016-07-29       Impact factor: 3.396

Review 3.  Chromatin dependencies in cancer and inflammation.

Authors:  Ivan Marazzi; Benjamin D Greenbaum; Diana H P Low; Ernesto Guccione
Journal:  Nat Rev Mol Cell Biol       Date:  2017-11-29       Impact factor: 94.444

4.  Dual Inhibition of TAF1 and BET Bromodomains from the BI-2536 Kinase Inhibitor Scaffold.

Authors:  David Remillard; Dennis L Buckley; Hyuk-Soo Seo; Fleur M Ferguson; Sirano Dhe-Paganon; James E Bradner; Nathanael S Gray
Journal:  ACS Med Chem Lett       Date:  2019-09-13       Impact factor: 4.345

Review 5.  Structural features and inhibitors of bromodomains.

Authors:  Jamel Meslamani; Steven G Smith; Roberto Sanchez; Ming-Ming Zhou
Journal:  Drug Discov Today Technol       Date:  2016-09-22

Review 6.  Dual-target inhibitors of bromodomain and extra-terminal proteins in cancer: A review from medicinal chemistry perspectives.

Authors:  Lu Feng; Guan Wang; Yi Chen; Gu He; Bo Liu; Jie Liu; Cheng-Ming Chiang; Liang Ouyang
Journal:  Med Res Rev       Date:  2021-10-11       Impact factor: 12.944

7.  Optimization of Naphthyridones into Selective TATA-Binding Protein Associated Factor 1 (TAF1) Bromodomain Inhibitors.

Authors:  Michael A Clegg; Natalie H Theodoulou; Paul Bamborough; Chun-Wa Chung; Peter D Craggs; Emmanuel H Demont; Laurie J Gordon; Gemma M Liwicki; Alex Phillipou; Nicholas C O Tomkinson; Rab K Prinjha; Philip G Humphreys
Journal:  ACS Med Chem Lett       Date:  2021-08-03       Impact factor: 4.632

8.  BET family members Bdf1/2 modulate global transcription initiation and elongation in Saccharomyces cerevisiae.

Authors:  Rafal Donczew; Steven Hahn
Journal:  Elife       Date:  2021-06-17       Impact factor: 8.140

9.  Cell-surface SLC nucleoside transporters and purine levels modulate BRD4-dependent chromatin states.

Authors:  Kai-Chun Li; Enrico Girardi; Felix Kartnig; Sarah Grosche; Tea Pemovska; Johannes W Bigenzahn; Ulrich Goldmann; Vitaly Sedlyarov; Ariel Bensimon; Sandra Schick; Jung-Ming G Lin; Bettina Gürtl; Daniela Reil; Kristaps Klavins; Stefan Kubicek; Sara Sdelci; Giulio Superti-Furga
Journal:  Nat Metab       Date:  2021-05-10

10.  Benzoisoquinolinediones as Potent and Selective Inhibitors of BRPF2 and TAF1/TAF1L Bromodomains.

Authors:  Léa Bouché; Clara D Christ; Stephan Siegel; Amaury E Fernández-Montalván; Simon J Holton; Oleg Fedorov; Antonius Ter Laak; Tatsuo Sugawara; Detlef Stöckigt; Cynthia Tallant; James Bennett; Octovia Monteiro; Laura Díaz-Sáez; Paulina Siejka; Julia Meier; Vera Pütter; Jörg Weiske; Susanne Müller; Kilian V M Huber; Ingo V Hartung; Bernard Haendler
Journal:  J Med Chem       Date:  2017-05-01       Impact factor: 7.446

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