Literature DB >> 26004246

Functional analysis of microRNA activity in Brugia malayi.

Canhui Liu1, Denis Voronin2, Catherine B Poole3, Saheed Bachu2, Matthew B Rogers4, Jingmin Jin3, Elodie Ghedin5, Sara Lustigman2, Larry A McReynolds3, Thomas R Unnasch6.   

Abstract

The complement of the Brugia malayi microRNA-71 was inserted into the 3' untranslated region of a reporter plasmid, resulting in a decrease in reporter activity. Mutation of the seed sequence restored activity. Insertion of the 3' untranslated regions from two algorithm-predicted putative target genes into the reporter resulted in a similar decrease in activity; mutation of the predicted target sequences restored activity. These experiments demonstrate that B. malayi microRNA targets may be predicted using current algorithms and describe a functional assay to confirm predicted targets.
Copyright © 2015 Australian Society for Parasitology Inc. Published by Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  Filariasis; Genetic regulation; Transfection; miRNA

Mesh:

Substances:

Year:  2015        PMID: 26004246      PMCID: PMC4490087          DOI: 10.1016/j.ijpara.2015.04.004

Source DB:  PubMed          Journal:  Int J Parasitol        ISSN: 0020-7519            Impact factor:   3.981


  24 in total

1.  Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.

Authors:  Benjamin P Lewis; Christopher B Burge; David P Bartel
Journal:  Cell       Date:  2005-01-14       Impact factor: 41.582

2.  The role of site accessibility in microRNA target recognition.

Authors:  Michael Kertesz; Nicola Iovino; Ulrich Unnerstall; Ulrike Gaul; Eran Segal
Journal:  Nat Genet       Date:  2007-09-23       Impact factor: 38.330

3.  Short RNAs repress translation after initiation in mammalian cells.

Authors:  Christian P Petersen; Marie-Eve Bordeleau; Jerry Pelletier; Phillip A Sharp
Journal:  Mol Cell       Date:  2006-02-17       Impact factor: 17.970

4.  The splice leader addition domain represents an essential conserved motif for heterologous gene expression in B. malayi.

Authors:  Canhui Liu; Chitra Chauhan; Charles R Katholi; Thomas R Unnasch
Journal:  Mol Biochem Parasitol       Date:  2009-02-24       Impact factor: 1.759

5.  Sequences necessary for trans-splicing in transiently transfected Brugia malayi.

Authors:  Canhui Liu; Ana de Oliveira; Tarig B Higazi; Elodie Ghedin; Jay DePasse; Thomas R Unnasch
Journal:  Mol Biochem Parasitol       Date:  2007-07-22       Impact factor: 1.759

6.  Structural determinants of miRNAs for RISC loading and slicer-independent unwinding.

Authors:  Tomoko Kawamata; Hervé Seitz; Yukihide Tomari
Journal:  Nat Struct Mol Biol       Date:  2009-08-16       Impact factor: 15.369

Review 7.  Small silencing RNAs: an expanding universe.

Authors:  Megha Ghildiyal; Phillip D Zamore
Journal:  Nat Rev Genet       Date:  2009-02       Impact factor: 53.242

8.  Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel.

Authors:  Alan D Winter; William Weir; Martin Hunt; Matthew Berriman; John S Gilleard; Eileen Devaney; Collette Britton
Journal:  BMC Genomics       Date:  2012-01-04       Impact factor: 3.969

9.  Principles of microRNA-target recognition.

Authors:  Julius Brennecke; Alexander Stark; Robert B Russell; Stephen M Cohen
Journal:  PLoS Biol       Date:  2005-03       Impact factor: 8.029

10.  Identification of Dirofilaria immitis miRNA using illumina deep sequencing.

Authors:  Yan Fu; Jingchao Lan; Xuhang Wu; Deying Yang; Zhihe Zhang; Huaming Nie; Rong Hou; Runhui Zhang; Wanpeng Zheng; Yue Xie; Ning Yan; Zhi Yang; Chengdong Wang; Li Luo; Li Liu; Xiaobin Gu; Shuxian Wang; Xuerong Peng; Guangyou Yang
Journal:  Vet Res       Date:  2013-01-18       Impact factor: 3.683

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  2 in total

Review 1.  Rendering the Intractable More Tractable: Tools from Caenorhabditis elegans Ripe for Import into Parasitic Nematodes.

Authors:  Jordan D Ward
Journal:  Genetics       Date:  2015-12       Impact factor: 4.562

Review 2.  CRISPR/Cas9 Mutagenesis and Expression of Dominant Mutant Transgenes as Functional Genomic Approaches in Parasitic Nematodes.

Authors:  James B Lok
Journal:  Front Genet       Date:  2019-07-16       Impact factor: 4.599

  2 in total

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