Literature DB >> 19428668

The splice leader addition domain represents an essential conserved motif for heterologous gene expression in B. malayi.

Canhui Liu1, Chitra Chauhan, Charles R Katholi, Thomas R Unnasch.   

Abstract

Two promoters from the human filarial parasite Brugia malayi have been mapped in detail. The essential domains of both promoters lacked canonical eukaryotic core promoter motifs. However, the largest contiguous essential domain in both promoters flanked and included the splice leader addition site. These findings suggested that the region flanking the trans-splicing addition site might represent a conserved core domain in B. malayi promoters. To test this hypothesis, the putative promoters of 12 trans-spliced genes encoding ribosomal protein homologues from B. malayi were isolated and tested for activity in a B. malayi transient transfection system. Of the 12 domains examined, 11 produced detectable reporter gene activity. Mutant constructs of the six most active promoters were prepared in which the spliced leader acceptor site and the 10 nt upstream and downstream of the site were deleted. All deletion constructs exhibited >90% reduction in reporter gene activity relative to their respective wild type sequences. A conserved pyrimidine-rich tract was located directly upstream from the spliced leader splice acceptor site which contained a conserved T residue located at position -3. Mutation of the entire polypyrimidine tract or the conserved T individually resulted in the loss of over 90% of reporter gene activity. In contrast, mutation of the splice acceptor site did not significantly reduce promoter activity. These data suggest that the region surrounding the splice acceptor site in the ribosomal promoters represents a conserved essential domain which functions independently of splice leader addition.

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Year:  2009        PMID: 19428668      PMCID: PMC2680783          DOI: 10.1016/j.molbiopara.2009.02.004

Source DB:  PubMed          Journal:  Mol Biochem Parasitol        ISSN: 0166-6851            Impact factor:   1.759


  13 in total

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3.  Intron encoded sequences necessary for trans splicing in transiently transfected Brugia malayi.

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Authors:  Limin Shu; Charles R Katholi; Tarig Higazi; Thomas R Unnasch
Journal:  Mol Biochem Parasitol       Date:  2003-04-25       Impact factor: 1.759

8.  P-Match: transcription factor binding site search by combining patterns and weight matrices.

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9.  Sequences necessary for trans-splicing in transiently transfected Brugia malayi.

Authors:  Canhui Liu; Ana de Oliveira; Tarig B Higazi; Elodie Ghedin; Jay DePasse; Thomas R Unnasch
Journal:  Mol Biochem Parasitol       Date:  2007-07-22       Impact factor: 1.759

10.  C. elegans sequences that control trans-splicing and operon pre-mRNA processing.

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  8 in total

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Authors:  James B Lok
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2.  Functional analysis of microRNA activity in Brugia malayi.

Authors:  Canhui Liu; Denis Voronin; Catherine B Poole; Saheed Bachu; Matthew B Rogers; Jingmin Jin; Elodie Ghedin; Sara Lustigman; Larry A McReynolds; Thomas R Unnasch
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3.  Analysis of transcriptional regulation of tetracycline responsive genes in Brugia malayi.

Authors:  Canhui Liu; Patrick Vander Kelen; Elodie Ghedin; Sara Lustigman; Thomas R Unnasch
Journal:  Mol Biochem Parasitol       Date:  2011-09-16       Impact factor: 1.759

4.  The role of polymorphisms in the spliced leader addition domain in determining promoter activity in Brugia malayi.

Authors:  Michelle Bailey; Chitra Chauhan; Canhui Liu; Thomas R Unnasch
Journal:  Mol Biochem Parasitol       Date:  2010-11-25       Impact factor: 1.759

5.  In vivo transfection of developmentally competent Brugia malayi infective larvae.

Authors:  Shulin Xu; Canhui Liu; George Tzertzinis; Elodie Ghedin; Christopher C Evans; Ray Kaplan; Thomas R Unnasch
Journal:  Int J Parasitol       Date:  2010-11-28       Impact factor: 3.981

6.  Identification of genes containing ecdysone response elements in the genome of Brugia malayi.

Authors:  Canhui Liu; Tracy Enright; George Tzertzinis; Thomas R Unnasch
Journal:  Mol Biochem Parasitol       Date:  2012-09-24       Impact factor: 1.759

7.  Functional analysis of putative operons in Brugia malayi.

Authors:  Canhui Liu; Ana Oliveira; Chitra Chauhan; Elodie Ghedin; Thomas R Unnasch
Journal:  Int J Parasitol       Date:  2009-07-23       Impact factor: 3.981

8.  Prediction pipeline for discovery of regulatory motifs associated with Brugia malayi molting.

Authors:  Alexandra Grote; Yichao Li; Canhui Liu; Denis Voronin; Adam Geber; Sara Lustigman; Thomas R Unnasch; Lonnie Welch; Elodie Ghedin
Journal:  PLoS Negl Trop Dis       Date:  2020-06-23
  8 in total

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