Literature DB >> 26003632

RecBCD is required to complete chromosomal replication: Implications for double-strand break frequencies and repair mechanisms.

Justin Courcelle1, Brian M Wendel2, Dena D Livingstone2, Charmain T Courcelle2.   

Abstract

Several aspects of the mechanism of homologous double-strand break repair remain unclear. Although intensive efforts have focused on how recombination reactions initiate, far less is known about the molecular events that follow. Based upon biochemical studies, current models propose that RecBCD processes double-strand ends and loads RecA to initiate recombinational repair. However, recent studies have shown that RecBCD plays a critical role in completing replication events on the chromosome through a mechanism that does not involve RecA or recombination. Here, we examine several studies, both early and recent, that suggest RecBCD also operates late in the recombination process - after initiation, strand invasion, and crossover resolution have occurred. Similar to its role in completing replication, we propose a model in which RecBCD is required to resect and resolve the DNA synthesis associated with homologous recombination at the point where the missing sequences on the broken molecule have been restored. We explain how the impaired ability to complete chromosome replication in recBC and recD mutants is likely to account for the loss of viability and genome instability in these mutants, and conclude that spontaneous double-strand breaks and replication fork collapse occur far less frequently than previously speculated.
Copyright © 2015 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Double-strand break repair; Homologous recombination; RecBCD; Replication completion

Mesh:

Substances:

Year:  2015        PMID: 26003632      PMCID: PMC4522357          DOI: 10.1016/j.dnarep.2015.04.018

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  124 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1989-03       Impact factor: 11.205

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Journal:  J Mol Biol       Date:  1990-01-05       Impact factor: 5.469

3.  Escherichia coli Tus protein acts to arrest the progression of DNA replication forks in vitro.

Authors:  T M Hill; K J Marians
Journal:  Proc Natl Acad Sci U S A       Date:  1990-04       Impact factor: 11.205

4.  Sequence-specific and polarized replication termination in vitro: complementation of extracts of tus- Escherichia coli by purified Ter protein and analysis of termination intermediates.

Authors:  T MacAllister; G S Khatri; D Bastia
Journal:  Proc Natl Acad Sci U S A       Date:  1990-04       Impact factor: 11.205

5.  Strand specificity of DNA unwinding by RecBCD enzyme.

Authors:  G Braedt; G R Smith
Journal:  Proc Natl Acad Sci U S A       Date:  1989-02       Impact factor: 11.205

6.  Loss of deoxyribonucleic acid-thymine during thymine starvation of Escherichia coli.

Authors:  T R Breitman; P B Maury; J N Toal
Journal:  J Bacteriol       Date:  1972-10       Impact factor: 3.490

7.  Chromosomal genes essential for stable maintenance of the mini-F plasmid in Escherichia coli.

Authors:  H Niki; C Ichinose; T Ogura; H Mori; M Morita; M Hasegawa; N Kusukawa; S Hiraga
Journal:  J Bacteriol       Date:  1988-11       Impact factor: 3.490

8.  Interaction between the sbcC gene of Escherichia coli and the gam gene of phage lambda.

Authors:  S K Kulkarni; F W Stahl
Journal:  Genetics       Date:  1989-10       Impact factor: 4.562

9.  Recombination of bacteriophage lambda in recD mutants of Escherichia coli.

Authors:  D S Thaler; E Sampson; I Siddiqi; S M Rosenberg; L C Thomason; F W Stahl; M M Stahl
Journal:  Genome       Date:  1989       Impact factor: 2.166

10.  Evidence of a ter specific binding protein essential for the termination reaction of DNA replication in Escherichia coli.

Authors:  T Kobayashi; M Hidaka; T Horiuchi
Journal:  EMBO J       Date:  1989-08       Impact factor: 11.598

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  20 in total

Review 1.  SOS response and its regulation on the fluoroquinolone resistance.

Authors:  Ting-Ting Qin; Hai-Quan Kang; Ping Ma; Peng-Peng Li; Lin-Yan Huang; Bing Gu
Journal:  Ann Transl Med       Date:  2015-12

2.  RecBCD, SbcCD and ExoI process a substrate created by convergent replisomes to complete DNA replication.

Authors:  Nicklas A Hamilton; Brian M Wendel; Emma A Weber; Charmain T Courcelle; Justin Courcelle
Journal:  Mol Microbiol       Date:  2019-05-06       Impact factor: 3.501

Review 3.  Implementation and Data Analysis of Tn-seq, Whole-Genome Resequencing, and Single-Molecule Real-Time Sequencing for Bacterial Genetics.

Authors:  Peter E Burby; Taylor M Nye; Jeremy W Schroeder; Lyle A Simmons
Journal:  J Bacteriol       Date:  2016-12-13       Impact factor: 3.490

4.  SbcC-SbcD and ExoI process convergent forks to complete chromosome replication.

Authors:  Brian M Wendel; Jessica M Cole; Charmain T Courcelle; Justin Courcelle
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-05       Impact factor: 11.205

5.  Replication fork convergence at termination: A multistep process.

Authors:  Nina Y Yao; Mike E O'Donnell
Journal:  Proc Natl Acad Sci U S A       Date:  2017-12-19       Impact factor: 11.205

6.  Nontarget Biomolecules Alter Macromolecular Changes Induced by Bactericidal Low-Temperature Plasma.

Authors:  A Privat-Maldonado; Y Gorbanev; D O'Connell; R Vann; V Chechik; M W van der Woude
Journal:  IEEE Trans Radiat Plasma Med Sci       Date:  2017-10-11

7.  RecA-independent recombination: Dependence on the Escherichia coli RarA protein.

Authors:  Kanika Jain; Elizabeth A Wood; Zachary J Romero; Michael M Cox
Journal:  Mol Microbiol       Date:  2020-12-19       Impact factor: 3.979

8.  Just how Lamarckian is CRISPR-Cas immunity: the continuum of evolvability mechanisms.

Authors:  Eugene V Koonin; Yuri I Wolf
Journal:  Biol Direct       Date:  2016-02-24       Impact factor: 4.540

9.  Thermus thermophilus Argonaute Functions in the Completion of DNA Replication.

Authors:  Samson M Jolly; Ildar Gainetdinov; Karina Jouravleva; Han Zhang; Lara Strittmatter; Shannon M Bailey; Gregory M Hendricks; Avantika Dhabaria; Beatrix Ueberheide; Phillip D Zamore
Journal:  Cell       Date:  2020-08-25       Impact factor: 41.582

10.  Division-induced DNA double strand breaks in the chromosome terminus region of Escherichia coli lacking RecBCD DNA repair enzyme.

Authors:  Anurag Kumar Sinha; Adeline Durand; Jean-Michel Desfontaines; Ielyzaveta Iurchenko; Hélène Auger; David R F Leach; François-Xavier Barre; Bénédicte Michel
Journal:  PLoS Genet       Date:  2017-10-02       Impact factor: 5.917

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