Literature DB >> 26002199

The Repeat Expansion Diseases: The dark side of DNA repair.

Xiao-Nan Zhao1, Karen Usdin2.   

Abstract

DNA repair normally protects the genome against mutations that threaten genome integrity and thus cell viability. However, growing evidence suggests that in the case of the Repeat Expansion Diseases, disorders that result from an increase in the size of a disease-specific microsatellite, the disease-causing mutation is actually the result of aberrant DNA repair. A variety of proteins from different DNA repair pathways have thus far been implicated in this process. This review will summarize recent findings from patients and from mouse models of these diseases that shed light on how these pathways may interact to cause repeat expansion. Published by Elsevier B.V.

Entities:  

Keywords:  Base excision repair; Global genome repair; Mismatch repair; Oxidative damage; Repeat Expansion Diseases; Transcription coupled repair

Mesh:

Year:  2015        PMID: 26002199      PMCID: PMC4522390          DOI: 10.1016/j.dnarep.2015.04.019

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  163 in total

1.  Fen1 does not control somatic hypermutability of the (CTG)(n)*(CAG)(n) repeat in a knock-in mouse model for DM1.

Authors:  Walther J A A van den Broek; Marcel R Nelen; Godfried W van der Heijden; Derick G Wansink; Bé Wieringa
Journal:  FEBS Lett       Date:  2006-09-05       Impact factor: 4.124

2.  CAG repeat instability at SCA2 locus: anchoring CAA interruptions and linked single nucleotide polymorphisms.

Authors:  S Choudhry; M Mukerji; A K Srivastava; S Jain; S K Brahmachari
Journal:  Hum Mol Genet       Date:  2001-10-01       Impact factor: 6.150

3.  Downregulation of Cockayne syndrome B protein reduces human 8-oxoguanine DNA glycosylase-1 expression and repair of UV radiation-induced 8-oxo-7,8-dihydro-2'-deoxyguanine.

Authors:  Arash Javeri; James Guy Lyons; Xiao X Huang; Gary M Halliday
Journal:  Cancer Sci       Date:  2011-07-18       Impact factor: 6.716

4.  Interruptions in the expanded ATTCT repeat of spinocerebellar ataxia type 10: repeat purity as a disease modifier?

Authors:  Tohru Matsuura; Ping Fang; Christopher E Pearson; Parul Jayakar; Tetsuo Ashizawa; Benjamin B Roa; David L Nelson
Journal:  Am J Hum Genet       Date:  2005-11-15       Impact factor: 11.025

5.  AGG interruptions in (CGG)(n) DNA repeat tracts modulate the structure and thermodynamics of non-B conformations in vitro.

Authors:  Daniel A Jarem; Lauren V Huckaby; Sarah Delaney
Journal:  Biochemistry       Date:  2010-08-17       Impact factor: 3.162

Review 6.  The balancing act of DNA repeat expansions.

Authors:  Jane C Kim; Sergei M Mirkin
Journal:  Curr Opin Genet Dev       Date:  2013-05-29       Impact factor: 5.578

7.  Msh2 acts in medium-spiny striatal neurons as an enhancer of CAG instability and mutant huntingtin phenotypes in Huntington's disease knock-in mice.

Authors:  Marina Kovalenko; Ella Dragileva; Jason St Claire; Tammy Gillis; Jolene R Guide; Jaclyn New; Hualing Dong; Raju Kucherlapati; Melanie H Kucherlapati; Michelle E Ehrlich; Jong-Min Lee; Vanessa C Wheeler
Journal:  PLoS One       Date:  2012-09-07       Impact factor: 3.240

8.  Mechanism of mismatch recognition revealed by human MutSβ bound to unpaired DNA loops.

Authors:  Shikha Gupta; Martin Gellert; Wei Yang
Journal:  Nat Struct Mol Biol       Date:  2011-12-18       Impact factor: 15.369

9.  Tissue-dependent regulation of RNAP II dynamics: the missing link between transcription and trinucleotide repeat instability in diseases?

Authors:  Agathi-Vasiliki Goula; Richard Festenstein; Karine Merienne
Journal:  Transcription       Date:  2013-08-02

10.  A CGG-repeat expansion mutation in ZNF713 causes FRA7A: association with autistic spectrum disorder in two families.

Authors:  Sofie Metsu; Jacqueline K Rainger; Kim Debacker; Birgitta Bernhard; Liesbeth Rooms; Daria Grafodatskaya; Rosanna Weksberg; Eric Fombonne; Martin S Taylor; Stephen W Scherer; R Frank Kooy; David R FitzPatrick
Journal:  Hum Mutat       Date:  2014-11       Impact factor: 4.878

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  23 in total

1.  Genomic Instability Promoted by Overexpression of Mismatch Repair Factors in Yeast: A Model for Understanding Cancer Progression.

Authors:  Ujani Chakraborty; Timothy A Dinh; Eric Alani
Journal:  Genetics       Date:  2018-04-13       Impact factor: 4.562

Review 2.  Obesity and cancer: A mechanistic overview of metabolic changes in obesity that impact genetic instability.

Authors:  Pallavi Kompella; Karen M Vasquez
Journal:  Mol Carcinog       Date:  2019-06-05       Impact factor: 4.784

Review 3.  Guidelines for DNA recombination and repair studies: Cellular assays of DNA repair pathways.

Authors:  Hannah L Klein; Giedrė Bačinskaja; Jun Che; Anais Cheblal; Rajula Elango; Anastasiya Epshtein; Devon M Fitzgerald; Belén Gómez-González; Sharik R Khan; Sandeep Kumar; Bryan A Leland; Léa Marie; Qian Mei; Judith Miné-Hattab; Alicja Piotrowska; Erica J Polleys; Christopher D Putnam; Elina A Radchenko; Anissia Ait Saada; Cynthia J Sakofsky; Eun Yong Shim; Mathew Stracy; Jun Xia; Zhenxin Yan; Yi Yin; Andrés Aguilera; Juan Lucas Argueso; Catherine H Freudenreich; Susan M Gasser; Dmitry A Gordenin; James E Haber; Grzegorz Ira; Sue Jinks-Robertson; Megan C King; Richard D Kolodner; Andrei Kuzminov; Sarah Ae Lambert; Sang Eun Lee; Kyle M Miller; Sergei M Mirkin; Thomas D Petes; Susan M Rosenberg; Rodney Rothstein; Lorraine S Symington; Pawel Zawadzki; Nayun Kim; Michael Lisby; Anna Malkova
Journal:  Microb Cell       Date:  2019-01-07

4.  ATR checkpoint suppression by repetitive DNA.

Authors:  Vincenzo Sannino; Vincenzo Costanzo
Journal:  Cell Cycle       Date:  2016-07-26       Impact factor: 4.534

Review 5.  Precarious maintenance of simple DNA repeats in eukaryotes.

Authors:  Alexander J Neil; Jane C Kim; Sergei M Mirkin
Journal:  Bioessays       Date:  2017-07-13       Impact factor: 4.345

6.  Novel probes for label-free detection of neurodegenerative GGGGCC repeats associated with amyotrophic lateral sclerosis.

Authors:  Motahareh Taki; Kushal J Rohilla; Maria Barton; Madison Funneman; Najiyah Benzabeh; Swati Naphade; Lisa M Ellerby; Keith T Gagnon; Mohtashim H Shamsi
Journal:  Anal Bioanal Chem       Date:  2019-08-21       Impact factor: 4.142

7.  Novel eGZ-motif formed by regularly extruded guanine bases in a left-handed Z-DNA helix as a major motif behind CGG trinucleotide repeats.

Authors:  Ashkan Fakharzadeh; Jiahui Zhang; Christopher Roland; Celeste Sagui
Journal:  Nucleic Acids Res       Date:  2022-05-20       Impact factor: 19.160

Review 8.  Interactions of high mobility group box protein 1 (HMGB1) with nucleic acids: Implications in DNA repair and immune responses.

Authors:  Pooja Mandke; Karen M Vasquez
Journal:  DNA Repair (Amst)       Date:  2019-09-16

9.  De novo repeat interruptions are associated with reduced somatic instability and mild or absent clinical features in myotonic dystrophy type 1.

Authors:  Sarah A Cumming; Mark J Hamilton; Yvonne Robb; Helen Gregory; Catherine McWilliam; Anneli Cooper; Berit Adam; Josephine McGhie; Graham Hamilton; Pawel Herzyk; Michael R Tschannen; Elizabeth Worthey; Richard Petty; Bob Ballantyne; Jon Warner; Maria Elena Farrugia; Cheryl Longman; Darren G Monckton
Journal:  Eur J Hum Genet       Date:  2018-07-02       Impact factor: 4.246

Review 10.  Base excision repair of oxidative DNA damage: from mechanism to disease.

Authors:  Amy M Whitaker; Matthew A Schaich; Mallory R Smith; Tony S Flynn; Bret D Freudenthal
Journal:  Front Biosci (Landmark Ed)       Date:  2017-03-01
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