Literature DB >> 25993897

Prospects of breeding high-quality rice using post-genomic tools.

Roslen Anacleto1, Rosa Paula Cuevas, Rosario Jimenez, Cindy Llorente, Eero Nissila, Robert Henry, Nese Sreenivasulu.   

Abstract

KEY MESSAGE: The holistic understanding derived from integrating grain quality and sensory research outcomes in breeding high-quality rice in the light of post-genomics resources has been synthesized. Acceptance of new rice genotypes by producers and consumers hinges not only on their potential for higher yield but recent emphasis has also been on premium-value genotypes that have the ability to satisfy consumer preferences for grain quality. This review article provides insights into how to link grain quality attributes and sensory perception to support breeding superior rice varieties. Recent advances in quality profiling and omics technologies have provided efficient approaches to identify the key genes and biochemical markers involved in rice quality traits. Emphasis has been given to the upcoming area of holistic understanding of grain quality and attributes derived from sensory evaluation to leverage integrative gene discovery strategies that enable breeding programs to efficiently tap the huge genetic diversity in rice for novel genes that enhance rice food quality.

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Year:  2015        PMID: 25993897     DOI: 10.1007/s00122-015-2537-6

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  66 in total

1.  What it will take to feed 5.0 billion rice consumers in 2030.

Authors:  Gurdev S Khush
Journal:  Plant Mol Biol       Date:  2005-09       Impact factor: 4.076

2.  Development of submergence-tolerant rice cultivars: the Sub1 locus and beyond.

Authors:  Endang M Septiningsih; Alvaro M Pamplona; Darlene L Sanchez; Chirravuri N Neeraja; Georgina V Vergara; Sigrid Heuer; Abdelbagi M Ismail; David J Mackill
Journal:  Ann Bot       Date:  2008-10-30       Impact factor: 4.357

3.  International Rice Research Institute: roles and challenges as we enter the genomics era.

Authors:  Hei Leung; Gene P Hettel; Ronald P Cantrell
Journal:  Trends Plant Sci       Date:  2002-03       Impact factor: 18.313

4.  Extruded rice fortified with micronized ground ferric pyrophosphate reduces iron deficiency in Indian schoolchildren: a double-blind randomized controlled trial.

Authors:  Diego Moretti; Michael B Zimmermann; Sumithra Muthayya; Prashanth Thankachan; Tung-Ching Lee; Anura V Kurpad; Richard F Hurrell
Journal:  Am J Clin Nutr       Date:  2006-10       Impact factor: 7.045

5.  Screening for 2-acetyl-1-pyrroline in the headspace of rice using SPME/GC-MS.

Authors:  C C Grimm; C Bergman; J T Delgado; R Bryant
Journal:  J Agric Food Chem       Date:  2001-01       Impact factor: 5.279

Review 6.  Different isoforms of starch-synthesizing enzymes controlling amylose and amylopectin content in rice (Oryza sativa L.).

Authors:  Manish K Pandey; N Shobha Rani; M Sheshu Madhav; R M Sundaram; G S Varaprasad; A K P Sivaranjani; Abhishek Bohra; G Ram Kumar; Anirudh Kumar
Journal:  Biotechnol Adv       Date:  2012-08-31       Impact factor: 14.227

7.  Inactivation of an aminoaldehyde dehydrogenase is responsible for fragrance in rice.

Authors:  Louis M T Bradbury; Susan A Gillies; Donald J Brushett; Daniel L E Waters; Robert J Henry
Journal:  Plant Mol Biol       Date:  2008-08-13       Impact factor: 4.076

8.  Genomic analysis of hybrid rice varieties reveals numerous superior alleles that contribute to heterosis.

Authors:  Xuehui Huang; Shihua Yang; Junyi Gong; Yan Zhao; Qi Feng; Hao Gong; Wenjun Li; Qilin Zhan; Benyi Cheng; Junhui Xia; Neng Chen; Zhongna Hao; Kunyan Liu; Chuanrang Zhu; Tao Huang; Qiang Zhao; Lei Zhang; Danlin Fan; Congcong Zhou; Yiqi Lu; Qijun Weng; Zi-Xuan Wang; Jiayang Li; Bin Han
Journal:  Nat Commun       Date:  2015-02-05       Impact factor: 14.919

9.  Multi-parent advanced generation inter-cross (MAGIC) populations in rice: progress and potential for genetics research and breeding.

Authors:  Nonoy Bandillo; Chitra Raghavan; Pauline Andrea Muyco; Ma Anna Lynn Sevilla; Irish T Lobina; Christine Jade Dilla-Ermita; Chih-Wei Tung; Susan McCouch; Michael Thomson; Ramil Mauleon; Rakesh Kumar Singh; Glenn Gregorio; Edilberto Redoña; Hei Leung
Journal:  Rice (N Y)       Date:  2013-05-06       Impact factor: 4.783

10.  A map of rice genome variation reveals the origin of cultivated rice.

Authors:  Xuehui Huang; Nori Kurata; Xinghua Wei; Zi-Xuan Wang; Ahong Wang; Qiang Zhao; Yan Zhao; Kunyan Liu; Hengyun Lu; Wenjun Li; Yunli Guo; Yiqi Lu; Congcong Zhou; Danlin Fan; Qijun Weng; Chuanrang Zhu; Tao Huang; Lei Zhang; Yongchun Wang; Lei Feng; Hiroyasu Furuumi; Takahiko Kubo; Toshie Miyabayashi; Xiaoping Yuan; Qun Xu; Guojun Dong; Qilin Zhan; Canyang Li; Asao Fujiyama; Atsushi Toyoda; Tingting Lu; Qi Feng; Qian Qian; Jiayang Li; Bin Han
Journal:  Nature       Date:  2012-10-03       Impact factor: 49.962

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  12 in total

1.  Diversity analysis and genome-wide association studies of grain shape and eating quality traits in rice (Oryza sativa L.) using DArT markers.

Authors:  Maurice Mogga; Julia Sibiya; Hussein Shimelis; Jimmy Lamo; Nasser Yao
Journal:  PLoS One       Date:  2018-06-01       Impact factor: 3.240

2.  Systems Genetics Identifies a Novel Regulatory Domain of Amylose Synthesis.

Authors:  Vito M Butardo; Roslen Anacleto; Sabiha Parween; Irene Samson; Krishna de Guzman; Crisline Mae Alhambra; Gopal Misra; Nese Sreenivasulu
Journal:  Plant Physiol       Date:  2016-11-23       Impact factor: 8.340

Review 3.  Post-genomics revolution in the design of premium quality rice in a high-yielding background to meet consumer demands in the 21st century.

Authors:  Nese Sreenivasulu; Changquan Zhang; Rhowell N Tiozon; Qiaoquan Liu
Journal:  Plant Commun       Date:  2021-12-28

4.  Variation in cooking and eating quality traits in Japanese rice germplasm accessions.

Authors:  Kiyosumi Hori; Keitaro Suzuki; Ken Iijima; Kaworu Ebana
Journal:  Breed Sci       Date:  2016-03-01       Impact factor: 2.086

5.  Sequencing of Australian wild rice genomes reveals ancestral relationships with domesticated rice.

Authors:  Marta Brozynska; Dario Copetti; Agnelo Furtado; Rod A Wing; Darren Crayn; Glen Fox; Ryuji Ishikawa; Robert J Henry
Journal:  Plant Biotechnol J       Date:  2017-01-23       Impact factor: 9.803

6.  Variations in agronomic and grain quality traits of rice grown under irrigated lowland conditions in West Africa.

Authors:  Seth Graham-Acquaah; Kazuki Saito; Karim Traore; Ibnou Dieng; Amakoe Alognon; Saidu Bah; Abdoulaye Sow; John T Manful
Journal:  Food Sci Nutr       Date:  2018-04-02       Impact factor: 2.863

7.  Whole genome sequencing-based association study to unravel genetic architecture of cooked grain width and length traits in rice.

Authors:  Gopal Misra; Saurabh Badoni; Roslen Anacleto; Andreas Graner; Nickolai Alexandrov; Nese Sreenivasulu
Journal:  Sci Rep       Date:  2017-09-29       Impact factor: 4.379

8.  Rice Soluble Starch Synthase I: Allelic Variation, Expression, Function, and Interaction With Waxy.

Authors:  Qianfeng Li; Xinyan Liu; Changquan Zhang; Li Jiang; Meiyan Jiang; Min Zhong; Xiaolei Fan; Minghong Gu; Qiaoquan Liu
Journal:  Front Plant Sci       Date:  2018-11-13       Impact factor: 5.753

9.  Deciphering the Genetic Architecture of Cooked Rice Texture.

Authors:  Gopal Misra; Saurabh Badoni; Cyril John Domingo; Rosa Paula O Cuevas; Cindy Llorente; Edwige Gaby Nkouaya Mbanjo; Nese Sreenivasulu
Journal:  Front Plant Sci       Date:  2018-10-02       Impact factor: 5.753

Review 10.  Rice quality: How is it defined by consumers, industry, food scientists, and geneticists?

Authors:  Marie Claire Custodio; Rosa Paula Cuevas; Jhoanne Ynion; Alice G Laborte; Maria Lourdes Velasco; Matty Demont
Journal:  Trends Food Sci Technol       Date:  2019-10       Impact factor: 12.563

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