Literature DB >> 25954459

Scalable and High-Throughput Execution of Clinical Quality Measures from Electronic Health Records using MapReduce and the JBoss® Drools Engine.

Kevin J Peterson1, Jyotishman Pathak2.   

Abstract

Automated execution of electronic Clinical Quality Measures (eCQMs) from electronic health records (EHRs) on large patient populations remains a significant challenge, and the testability, interoperability, and scalability of measure execution are critical. The High Throughput Phenotyping (HTP; http://phenotypeportal.org) project aligns with these goals by using the standards-based HL7 Health Quality Measures Format (HQMF) and Quality Data Model (QDM) for measure specification, as well as Common Terminology Services 2 (CTS2) for semantic interpretation. The HQMF/QDM representation is automatically transformed into a JBoss(®) Drools workflow, enabling horizontal scalability via clustering and MapReduce algorithms. Using Project Cypress, automated verification metrics can then be produced. Our results show linear scalability for nine executed 2014 Center for Medicare and Medicaid Services (CMS) eCQMs for eligible professionals and hospitals for >1,000,000 patients, and verified execution correctness of 96.4% based on Project Cypress test data of 58 eCQMs.

Entities:  

Mesh:

Year:  2014        PMID: 25954459      PMCID: PMC4419873     

Source DB:  PubMed          Journal:  AMIA Annu Symp Proc        ISSN: 1559-4076


  8 in total

1.  OIDs: how can I express you? Let me count the ways.

Authors:  Steven J Steindel
Journal:  J Am Med Inform Assoc       Date:  2010 Mar-Apr       Impact factor: 4.497

2.  An evaluation of the NQF Quality Data Model for representing Electronic Health Record driven phenotyping algorithms.

Authors:  William K Thompson; Luke V Rasmussen; Jennifer A Pacheco; Peggy L Peissig; Joshua C Denny; Abel N Kho; Aaron Miller; Jyotishman Pathak
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

3.  Building a robust, scalable and standards-driven infrastructure for secondary use of EHR data: the SHARPn project.

Authors:  Susan Rea; Jyotishman Pathak; Guergana Savova; Thomas A Oniki; Les Westberg; Calvin E Beebe; Cui Tao; Craig G Parker; Peter J Haug; Stanley M Huff; Christopher G Chute
Journal:  J Biomed Inform       Date:  2012-02-04       Impact factor: 6.317

4.  Normalization and standardization of electronic health records for high-throughput phenotyping: the SHARPn consortium.

Authors:  Jyotishman Pathak; Kent R Bailey; Calvin E Beebe; Steven Bethard; David C Carrell; Pei J Chen; Dmitriy Dligach; Cory M Endle; Lacey A Hart; Peter J Haug; Stanley M Huff; Vinod C Kaggal; Dingcheng Li; Hongfang Liu; Kyle Marchant; James Masanz; Timothy Miller; Thomas A Oniki; Martha Palmer; Kevin J Peterson; Susan Rea; Guergana K Savova; Craig R Stancl; Sunghwan Sohn; Harold R Solbrig; Dale B Suesse; Cui Tao; David P Taylor; Les Westberg; Stephen Wu; Ning Zhuo; Christopher G Chute
Journal:  J Am Med Inform Assoc       Date:  2013-11-04       Impact factor: 4.497

5.  Modeling and executing electronic health records driven phenotyping algorithms using the NQF Quality Data Model and JBoss® Drools Engine.

Authors:  Dingcheng Li; Cory M Endle; Sahana Murthy; Craig Stancl; Dale Suesse; Davide Sottara; Stanley M Huff; Christopher G Chute; Jyotishman Pathak
Journal:  AMIA Annu Symp Proc       Date:  2012-11-03

6.  The impact of emerging standards adoption on automated quality reporting.

Authors:  Paul C Fu; Daniel Rosenthal; Joshua M Pevnick; Floyd Eisenberg
Journal:  J Biomed Inform       Date:  2012-07-20       Impact factor: 6.317

7.  Analysis of eligibility criteria complexity in clinical trials.

Authors:  Jessica Ross; Samson Tu; Simona Carini; Ida Sim
Journal:  Summit Transl Bioinform       Date:  2010-03-01

Review 8.  The Electronic Medical Records and Genomics (eMERGE) Network: past, present, and future.

Authors:  Omri Gottesman; Helena Kuivaniemi; Gerard Tromp; W Andrew Faucett; Rongling Li; Teri A Manolio; Saskia C Sanderson; Joseph Kannry; Randi Zinberg; Melissa A Basford; Murray Brilliant; David J Carey; Rex L Chisholm; Christopher G Chute; John J Connolly; David Crosslin; Joshua C Denny; Carlos J Gallego; Jonathan L Haines; Hakon Hakonarson; John Harley; Gail P Jarvik; Isaac Kohane; Iftikhar J Kullo; Eric B Larson; Catherine McCarty; Marylyn D Ritchie; Dan M Roden; Maureen E Smith; Erwin P Böttinger; Marc S Williams
Journal:  Genet Med       Date:  2013-06-06       Impact factor: 8.822

  8 in total
  3 in total

1.  Quality Informatics: The Convergence of Healthcare Data, Analytics, and Clinical Excellence.

Authors:  Nathan A Coppersmith; Indra Neil Sarkar; Elizabeth S Chen
Journal:  Appl Clin Inform       Date:  2019-04-24       Impact factor: 2.342

2.  Clinical phenotyping in selected national networks: demonstrating the need for high-throughput, portable, and computational methods.

Authors:  Rachel L Richesson; Jimeng Sun; Jyotishman Pathak; Abel N Kho; Joshua C Denny
Journal:  Artif Intell Med       Date:  2016-06-25       Impact factor: 5.326

3.  Desiderata for computable representations of electronic health records-driven phenotype algorithms.

Authors:  Huan Mo; William K Thompson; Luke V Rasmussen; Jennifer A Pacheco; Guoqian Jiang; Richard Kiefer; Qian Zhu; Jie Xu; Enid Montague; David S Carrell; Todd Lingren; Frank D Mentch; Yizhao Ni; Firas H Wehbe; Peggy L Peissig; Gerard Tromp; Eric B Larson; Christopher G Chute; Jyotishman Pathak; Joshua C Denny; Peter Speltz; Abel N Kho; Gail P Jarvik; Cosmin A Bejan; Marc S Williams; Kenneth Borthwick; Terrie E Kitchner; Dan M Roden; Paul A Harris
Journal:  J Am Med Inform Assoc       Date:  2015-09-05       Impact factor: 4.497

  3 in total

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