Literature DB >> 25951412

Post-expression strategies for structural investigations of membrane proteins.

Linda Columbus1.   

Abstract

Currently, membrane proteins only comprise 1.5% of the protein data bank and, thus, still remain a challenge for structural biologists. Expression, stabilization in membrane mimics (e.g. detergent), heterogeneity (conformational and chemical), and crystallization in the presence of a membrane mimic are four major bottlenecks encountered. In response, several post-expression protein modifications have been utilized to facilitate structure determination of membrane proteins. This review highlights four approaches: limited proteolysis, deglycosylation, cysteine alkylation, and lysine methylation. Combined these approaches have facilitated the structure determination of more than 40 membrane proteins and, therefore, are a useful addition to the membrane protein structural biologist's toolkit.
Copyright © 2015 Elsevier Ltd. All rights reserved.

Entities:  

Mesh:

Substances:

Year:  2015        PMID: 25951412      PMCID: PMC4512879          DOI: 10.1016/j.sbi.2015.04.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN: 0959-440X            Impact factor:   6.809


  78 in total

1.  Crystal structure of the bacterial membrane protein TolC central to multidrug efflux and protein export.

Authors:  V Koronakis; A Sharff; E Koronakis; B Luisi; C Hughes
Journal:  Nature       Date:  2000-06-22       Impact factor: 49.962

2.  Site-selective screening by NMR spectroscopy with labeled amino acid pairs.

Authors:  Johan Weigelt; Maria van Dongen; Jonas Uppenberg; Johan Schultz; Mats Wikström
Journal:  J Am Chem Soc       Date:  2002-03-20       Impact factor: 15.419

Review 3.  Mass spectrometry as a tool for protein crystallography.

Authors:  S L Cohen; B T Chait
Journal:  Annu Rev Biophys Biomol Struct       Date:  2001

4.  The structure of the potassium channel: molecular basis of K+ conduction and selectivity.

Authors:  D A Doyle; J Morais Cabral; R A Pfuetzner; A Kuo; J M Gulbis; S L Cohen; B T Chait; R MacKinnon
Journal:  Science       Date:  1998-04-03       Impact factor: 47.728

5.  Reductive alkylation of lysine residues to alter crystallization properties of proteins.

Authors:  I Rayment
Journal:  Methods Enzymol       Date:  1997       Impact factor: 1.600

6.  Structural basis of water-specific transport through the AQP1 water channel.

Authors:  H Sui; B G Han; J K Lee; P Walian; B K Jap
Journal:  Nature       Date:  2001 Dec 20-27       Impact factor: 49.962

7.  Crystallization and preliminary X-ray crystallographic analysis of water channel AQP1.

Authors:  H Sui; P J Walian; G Tang; A Oh; B K Jap
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2000-09

8.  Crystal structure of the human OX2 orexin receptor bound to the insomnia drug suvorexant.

Authors:  Jie Yin; Juan Carlos Mobarec; Peter Kolb; Daniel M Rosenbaum
Journal:  Nature       Date:  2014-12-22       Impact factor: 49.962

9.  A pivotal role for reductive methylation in the de novo crystallization of a ternary complex composed of Yersinia pestis virulence factors YopN, SycN and YscB.

Authors:  Florian D Schubot; David S Waugh
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2004-10-20

10.  Structural biology. Structural basis for chemokine recognition and activation of a viral G protein-coupled receptor.

Authors:  John S Burg; Jessica R Ingram; A J Venkatakrishnan; Kevin M Jude; Abhiram Dukkipati; Evan N Feinberg; Alessandro Angelini; Deepa Waghray; Ron O Dror; Hidde L Ploegh; K Christopher Garcia
Journal:  Science       Date:  2015-03-06       Impact factor: 47.728

View more
  7 in total

Review 1.  Current strategies for protein production and purification enabling membrane protein structural biology.

Authors:  Aditya Pandey; Kyungsoo Shin; Robin E Patterson; Xiang-Qin Liu; Jan K Rainey
Journal:  Biochem Cell Biol       Date:  2016-01-20       Impact factor: 3.626

2.  Native mass spectrometry and ion mobility characterize the orange carotenoid protein functional domains.

Authors:  Hao Zhang; Haijun Liu; Yue Lu; Nathan R Wolf; Michael L Gross; Robert E Blankenship
Journal:  Biochim Biophys Acta       Date:  2016-02-24

Review 3.  Hijacked then lost in translation: the plight of the recombinant host cell in membrane protein structural biology projects.

Authors:  Roslyn M Bill; Tobias von der Haar
Journal:  Curr Opin Struct Biol       Date:  2015-06-01       Impact factor: 6.809

Review 4.  Biological roles of glycans.

Authors:  Ajit Varki
Journal:  Glycobiology       Date:  2016-08-24       Impact factor: 4.313

5.  Host-Dependent Producibility of Recombinant Cypridina noctiluca Luciferase With Glycosylation Defects.

Authors:  Yasuo Mitani; Rie Yasuno; Kiyohito Kihira; KwiMi Chung; Nobutaka Mitsuda; Shusei Kanie; Azusa Tomioka; Hiroyuki Kaji; Yoshihiro Ohmiya
Journal:  Front Bioeng Biotechnol       Date:  2022-02-07

6.  Non-detergent isolation of a cyanobacterial photosystem I using styrene maleic acid alternating copolymers.

Authors:  Nathan G Brady; Meng Li; Yue Ma; James C Gumbart; Barry D Bruce
Journal:  RSC Adv       Date:  2019-10-07       Impact factor: 4.036

Review 7.  Protein stability: a crystallographer's perspective.

Authors:  Marc C Deller; Leopold Kong; Bernhard Rupp
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-01-26       Impact factor: 1.056

  7 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.