Literature DB >> 25917813

Functional analysis of naturally occurring DCLRE1C mutations and correlation with the clinical phenotype of ARTEMIS deficiency.

Kerstin Felgentreff1, Yu Nee Lee1, Francesco Frugoni1, Likun Du1, Mirjam van der Burg2, Silvia Giliani3, Ilhan Tezcan4, Ismail Reisli5, Ester Mejstrikova6, Jean-Pierre de Villartay7, Barry P Sleckman8, John Manis9, Luigi D Notarangelo10.   

Abstract

BACKGROUND: The endonuclease ARTEMIS, which is encoded by the DCLRE1C gene, is a component of the nonhomologous end-joining pathway and participates in hairpin opening during the V(D)J recombination process and repair of a subset of DNA double-strand breaks. Patients with ARTEMIS deficiency usually present with severe combined immunodeficiency (SCID) and cellular radiosensitivity, but hypomorphic mutations can cause milder phenotypes (leaky SCID).
OBJECTIVE: We sought to correlate the functional effect of human DCLRE1C mutations on phenotypic presentation in patients with ARTEMIS deficiency.
METHODS: We studied the recombination and DNA repair activity of 41 human DCLRE1C mutations in Dclre1c(-/-) v-abl kinase-transformed pro-B cells retrovirally engineered with a construct that allows quantification of recombination activity by means of flow cytometry. For assessment of DNA repair efficacy, resolution of γH2AX accumulation was studied after ionizing radiation.
RESULTS: Low or absent activity was detected for mutations causing a typical SCID phenotype. Most of the patients with leaky SCID were compound heterozygous for 1 loss-of-function and 1 hypomorphic allele, with significant residual levels of recombination and DNA repair activity. Deletions disrupting the C-terminus result in truncated but partially functional proteins and are often associated with leaky SCID. Overexpression of hypomorphic mutants might improve the functional defect.
CONCLUSIONS: Correlation between the nature and location of DCLRE1C mutations, functional activity, and the clinical phenotype has been observed. Hypomorphic variants that have been reported in the general population can be disease causing if combined in trans with a loss-of-function allele. Therapeutic strategies aimed at inducing overexpression of hypomorphic alleles might be beneficial.
Copyright © 2015 American Academy of Allergy, Asthma & Immunology. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  ARTEMIS deficiency; DCLRE1C mutations; DNA repair; V(D)J recombination; nonhomologous end-joining; severe combined immunodeficiency

Mesh:

Substances:

Year:  2015        PMID: 25917813      PMCID: PMC4494888          DOI: 10.1016/j.jaci.2015.03.005

Source DB:  PubMed          Journal:  J Allergy Clin Immunol        ISSN: 0091-6749            Impact factor:   10.793


  38 in total

1.  An Artemis polymorphic variant reduces Artemis activity and confers cellular radiosensitivity.

Authors:  Lisa Woodbine; Sofia Grigoriadou; Aaron A Goodarzi; Enriqueta Riballo; Christopher Tape; Antony W Oliver; Menno C van Zelm; Matthew S Buckland; E Graham Davies; Laurence H Pearl; Penny A Jeggo
Journal:  DNA Repair (Amst)       Date:  2010-07-31

2.  Hypomorphic Rag mutations can cause destructive midline granulomatous disease.

Authors:  Suk See De Ravin; Edward W Cowen; Kol A Zarember; Narda L Whiting-Theobald; Douglas B Kuhns; Netanya G Sandler; Daniel C Douek; Stefania Pittaluga; Pietro L Poliani; Yu Nee Lee; Luigi D Notarangelo; Lei Wang; Frederick W Alt; Elizabeth M Kang; Joshua D Milner; Julie E Niemela; Mary Fontana-Penn; Sara H Sinal; Harry L Malech
Journal:  Blood       Date:  2010-05-20       Impact factor: 22.113

3.  Hairpin opening and overhang processing by an Artemis/DNA-dependent protein kinase complex in nonhomologous end joining and V(D)J recombination.

Authors:  Yunmei Ma; Ulrich Pannicke; Klaus Schwarz; Michael R Lieber
Journal:  Cell       Date:  2002-03-22       Impact factor: 41.582

4.  Artemis, a novel DNA double-strand break repair/V(D)J recombination protein, is mutated in human severe combined immune deficiency.

Authors:  D Moshous; I Callebaut; R de Chasseval; B Corneo; M Cavazzana-Calvo; F Le Deist; I Tezcan; O Sanal; Y Bertrand; N Philippe; A Fischer; J P de Villartay
Journal:  Cell       Date:  2001-04-20       Impact factor: 41.582

Review 5.  The many faces of Artemis-deficient combined immunodeficiency - Two patients with DCLRE1C mutations and a systematic literature review of genotype-phenotype correlation.

Authors:  Pamela P Lee; Lisa Woodbine; Kimberly C Gilmour; Shahnaz Bibi; Catherine M Cale; Persis J Amrolia; Paul A Veys; E Graham Davies; Penny A Jeggo; Alison Jones
Journal:  Clin Immunol       Date:  2013-08-27       Impact factor: 3.969

6.  A founder mutation in Artemis, an SNM1-like protein, causes SCID in Athabascan-speaking Native Americans.

Authors:  Lanying Li; Despina Moshous; Yungui Zhou; Junhua Wang; Gang Xie; Eduardo Salido; Diana Hu; Jean-Pierre de Villartay; Morton J Cowan
Journal:  J Immunol       Date:  2002-06-15       Impact factor: 5.422

7.  Atypical combined immunodeficiency due to Artemis defect: a case presenting as hyperimmunoglobulin M syndrome and with LGLL.

Authors:  İnci Yaman Bajin; Deniz Çağdaş Ayvaz; Sule Ünal; Tuba Turul Özgür; Mualla Çetin; Fatma Gümrük; İlhan Tezcan; Jean-Pierre de Villartay; Özden Sanal
Journal:  Mol Immunol       Date:  2013-08-01       Impact factor: 4.407

8.  Statistical analysis of kinetics, distribution and co-localisation of DNA repair foci in irradiated cells: cell cycle effect and implications for prediction of radiosensitivity.

Authors:  Olga A Martin; Alesia Ivashkevich; Sharon Choo; Lisa Woodbine; Penny A Jeggo; Roger F Martin; Pavel Lobachevsky
Journal:  DNA Repair (Amst)       Date:  2013-07-26

9.  Artemis C-terminal region facilitates V(D)J recombination through its interactions with DNA Ligase IV and DNA-PKcs.

Authors:  Shruti Malu; Pablo De Ioannes; Mikhail Kozlov; Marsha Greene; Dailia Francis; Mary Hanna; Jesse Pena; Carlos R Escalante; Aya Kurosawa; Hediye Erdjument-Bromage; Paul Tempst; Noritaka Adachi; Paolo Vezzoni; Anna Villa; Aneel K Aggarwal; Patricia Cortes
Journal:  J Exp Med       Date:  2012-04-23       Impact factor: 14.307

10.  Lentiviral hematopoietic stem cell gene therapy benefits metachromatic leukodystrophy.

Authors:  Alessandra Biffi; Eugenio Montini; Laura Lorioli; Martina Cesani; Francesca Fumagalli; Tiziana Plati; Cristina Baldoli; Sabata Martino; Andrea Calabria; Sabrina Canale; Fabrizio Benedicenti; Giuliana Vallanti; Luca Biasco; Simone Leo; Nabil Kabbara; Gianluigi Zanetti; William B Rizzo; Nalini A L Mehta; Maria Pia Cicalese; Miriam Casiraghi; Jaap J Boelens; Ubaldo Del Carro; David J Dow; Manfred Schmidt; Andrea Assanelli; Victor Neduva; Clelia Di Serio; Elia Stupka; Jason Gardner; Christof von Kalle; Claudio Bordignon; Fabio Ciceri; Attilio Rovelli; Maria Grazia Roncarolo; Alessandro Aiuti; Maria Sessa; Luigi Naldini
Journal:  Science       Date:  2013-07-11       Impact factor: 47.728

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  23 in total

Review 1.  Primary immunodeficiencies and their associated risk of malignancies in children: an overview.

Authors:  Samuele Renzi; Karin Petra Sabine Langenberg-Ververgaert; Nicolas Waespe; Salah Ali; Jack Bartram; Orli Michaeli; Julia Upton; Michaela Cada
Journal:  Eur J Pediatr       Date:  2020-03-11       Impact factor: 3.183

Review 2.  Recent advances in the study of immunodeficiency and DNA damage response.

Authors:  Tomohiro Morio
Journal:  Int J Hematol       Date:  2017-05-26       Impact factor: 2.490

3.  DCLRE1C (ARTEMIS) mutations causing phenotypes ranging from atypical severe combined immunodeficiency to mere antibody deficiency.

Authors:  Timo Volk; Ulrich Pannicke; Ismail Reisli; Alla Bulashevska; Julia Ritter; Andrea Björkman; Alejandro A Schäffer; Manfred Fliegauf; Esra H Sayar; Ulrich Salzer; Paul Fisch; Dietmar Pfeifer; Michela Di Virgilio; Hongzhi Cao; Fang Yang; Karin Zimmermann; Sevgi Keles; Zafer Caliskaner; S Ükrü Güner; Detlev Schindler; Lennart Hammarström; Marta Rizzi; Michael Hummel; Qiang Pan-Hammarström; Klaus Schwarz; Bodo Grimbacher
Journal:  Hum Mol Genet       Date:  2015-10-16       Impact factor: 6.150

4.  Application of a radiosensitivity flow assay in a patient with DNA ligase 4 deficiency.

Authors:  David Buchbinder; Matthew J Smith; Misako Kawahara; Morton J Cowan; Jeffrey S Buzby; Roshini S Abraham
Journal:  Blood Adv       Date:  2018-08-14

Review 5.  The molecular basis and disease relevance of non-homologous DNA end joining.

Authors:  Bailin Zhao; Eli Rothenberg; Dale A Ramsden; Michael R Lieber
Journal:  Nat Rev Mol Cell Biol       Date:  2020-10-19       Impact factor: 94.444

6.  A genome-wide analysis of gene-caffeine consumption interaction on basal cell carcinoma.

Authors:  Xin Li; Marilyn C Cornelis; Liming Liang; Fengju Song; Immaculata De Vivo; Edward Giovannucci; Jean Y Tang; Jiali Han
Journal:  Carcinogenesis       Date:  2016-10-07       Impact factor: 4.944

Review 7.  Advances in clinical immunology in 2015.

Authors:  Javier Chinen; Luigi D Notarangelo; William T Shearer
Journal:  J Allergy Clin Immunol       Date:  2016-12       Impact factor: 10.793

8.  Rubella Virus-Associated Cutaneous Granulomatous Disease: a Unique Complication in Immune-Deficient Patients, Not Limited to DNA Repair Disorders.

Authors:  David Buchbinder; Fabian Hauck; Michael H Albert; Anita Rack; Shahrzad Bakhtiar; Anna Shcherbina; Elena Deripapa; Kathleen E Sullivan; Ludmila Perelygina; Marc Eloit; Bénédicte Neven; Philippe Pérot; Despina Moshous; Félipe Suarez; Christine Bodemer; Francisco A Bonilla; Louise E Vaz; Alfons L Krol; Christoph Klein; Mikko Seppanen; Diane J Nugent; Jasjit Singh; Hans D Ochs
Journal:  J Clin Immunol       Date:  2019-01-03       Impact factor: 8.317

Review 9.  Clinical heterogeneity of mitochondrial NAD kinase deficiency caused by a NADK2 start loss variant.

Authors:  Daniel J Pomerantz; Sacha Ferdinandusse; Joy Cogan; David N Cooper; Tyler Reimschisel; Amy Robertson; Anna Bican; Tracy McGregor; Jackie Gauthier; David S Millington; Jaime L W Andrae; Michael R Tschannen; Daniel C Helbling; Wendy M Demos; Simone Denis; Ronald J A Wanders; John N Newman; Rizwan Hamid; John A Phillips
Journal:  Am J Med Genet A       Date:  2018-02-01       Impact factor: 2.802

Review 10.  Beyond monogenetic rare variants: tackling the low rate of genetic diagnoses in predominantly antibody deficiency.

Authors:  Emily S J Edwards; Julian J Bosco; Samar Ojaimi; Robyn E O'Hehir; Menno C van Zelm
Journal:  Cell Mol Immunol       Date:  2020-08-17       Impact factor: 11.530

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