Literature DB >> 33077885

The molecular basis and disease relevance of non-homologous DNA end joining.

Bailin Zhao1,2,3,4,5, Eli Rothenberg6, Dale A Ramsden7, Michael R Lieber8,9,10,11,12.   

Abstract

Non-homologous DNA end joining (NHEJ) is the predominant repair mechanism of any type of DNA double-strand break (DSB) during most of the cell cycle and is essential for the development of antigen receptors. Defects in NHEJ result in sensitivity to ionizing radiation and loss of lymphocytes. The most critical step of NHEJ is synapsis, or the juxtaposition of the two DNA ends of a DSB, because all subsequent steps rely on it. Recent findings show that, like the end processing step, synapsis can be achieved through several mechanisms. In this Review, we first discuss repair pathway choice between NHEJ and other DSB repair pathways. We then integrate recent insights into the mechanisms of NHEJ synapsis with updates on other steps of NHEJ, such as DNA end processing and ligation. Finally, we discuss NHEJ-related human diseases, including inherited disorders and neoplasia, which arise from rare failures at different NHEJ steps.

Entities:  

Mesh:

Year:  2020        PMID: 33077885      PMCID: PMC8063501          DOI: 10.1038/s41580-020-00297-8

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  233 in total

1.  Rag mutations reveal robust alternative end joining.

Authors:  Barbara Corneo; Rebecca L Wendland; Ludovic Deriano; Xiaoping Cui; Isaac A Klein; Serre-Yu Wong; Suzzette Arnal; Abigail J Holub; Geoffrey R Weller; Bette A Pancake; Sundeep Shah; Vicky L Brandt; Katheryn Meek; David B Roth
Journal:  Nature       Date:  2007-09-27       Impact factor: 49.962

2.  Chromatin dynamics during DSB repair.

Authors:  Martin Falk; Emilie Lukasova; Barbora Gabrielova; Vladan Ondrej; Stanislav Kozubek
Journal:  Biochim Biophys Acta       Date:  2007-07-18

Review 3.  SMC complexes: from DNA to chromosomes.

Authors:  Frank Uhlmann
Journal:  Nat Rev Mol Cell Biol       Date:  2016-04-14       Impact factor: 94.444

4.  53BP1 fosters fidelity of homology-directed DNA repair.

Authors:  Fena Ochs; Kumar Somyajit; Matthias Altmeyer; Maj-Britt Rask; Jiri Lukas; Claudia Lukas
Journal:  Nat Struct Mol Biol       Date:  2016-06-27       Impact factor: 15.369

Review 5.  The mechanism of double-strand DNA break repair by the nonhomologous DNA end-joining pathway.

Authors:  Michael R Lieber
Journal:  Annu Rev Biochem       Date:  2010       Impact factor: 23.643

6.  53BP1 and the LINC Complex Promote Microtubule-Dependent DSB Mobility and DNA Repair.

Authors:  Francisca Lottersberger; Roos Anna Karssemeijer; Nadya Dimitrova; Titia de Lange
Journal:  Cell       Date:  2015-11-05       Impact factor: 41.582

7.  REV7 counteracts DNA double-strand break resection and affects PARP inhibition.

Authors:  J Ross Chapman; Inger Brandsma; Guotai Xu; Jingsong Yuan; Martin Mistrik; Peter Bouwman; Jirina Bartkova; Ewa Gogola; Daniël Warmerdam; Marco Barazas; Janneke E Jaspers; Kenji Watanabe; Mark Pieterse; Ariena Kersbergen; Wendy Sol; Patrick H N Celie; Philip C Schouten; Bram van den Broek; Ahmed Salman; Marja Nieuwland; Iris de Rink; Jorma de Ronde; Kees Jalink; Simon J Boulton; Junjie Chen; Dik C van Gent; Jiri Bartek; Jos Jonkers; Piet Borst; Sven Rottenberg
Journal:  Nature       Date:  2015-03-23       Impact factor: 49.962

8.  Lymphocyte-specific compensation for XLF/cernunnos end-joining functions in V(D)J recombination.

Authors:  Gang Li; Frederick W Alt; Hwei-Ling Cheng; James W Brush; Peter H Goff; Mike M Murphy; Sonia Franco; Yu Zhang; Shan Zha
Journal:  Mol Cell       Date:  2008-09-05       Impact factor: 17.970

9.  Effects of novel inhibitors of poly(ADP-ribose) polymerase-1 and the DNA-dependent protein kinase on enzyme activities and DNA repair.

Authors:  Stephany J Veuger; Nicola J Curtin; Graeme C M Smith; Barbara W Durkacz
Journal:  Oncogene       Date:  2004-09-23       Impact factor: 8.756

10.  Mechanistic basis for microhomology identification and genome scarring by polymerase theta.

Authors:  Juan Carvajal-Garcia; Jang-Eun Cho; Pablo Carvajal-Garcia; Wanjuan Feng; Richard D Wood; Jeff Sekelsky; Gaorav P Gupta; Steven A Roberts; Dale A Ramsden
Journal:  Proc Natl Acad Sci U S A       Date:  2020-03-31       Impact factor: 11.205

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  73 in total

1.  Nonhomologous end joining as key to CRISPR/Cas-mediated plant chromosome engineering.

Authors:  Fabienne Gehrke; Angelina Schindele; Holger Puchta
Journal:  Plant Physiol       Date:  2022-03-28       Impact factor: 8.340

2.  Autophosphorylation transforms DNA-PK from protecting to processing DNA ends.

Authors:  Lan Liu; Xuemin Chen; Jun Li; Huaibin Wang; Christopher J Buehl; Noah J Goff; Katheryn Meek; Wei Yang; Martin Gellert
Journal:  Mol Cell       Date:  2021-12-21       Impact factor: 17.970

3.  Combining genotypes and T cell receptor distributions to infer genetic loci determining V(D)J recombination probabilities.

Authors:  Frederick A Matsen; Philip Bradley; Magdalena L Russell; Aisha Souquette; David M Levine; Stefan A Schattgen; E Kaitlynn Allen; Guillermina Kuan; Noah Simon; Angel Balmaseda; Aubree Gordon; Paul G Thomas
Journal:  Elife       Date:  2022-03-22       Impact factor: 8.140

Review 4.  Radiotherapy as a tool to elicit clinically actionable signalling pathways in cancer.

Authors:  Giulia Petroni; Lewis C Cantley; Laura Santambrogio; Silvia C Formenti; Lorenzo Galluzzi
Journal:  Nat Rev Clin Oncol       Date:  2021-11-24       Impact factor: 66.675

5.  Long Noncoding RNA NIHCOLE Promotes Ligation Efficiency of DNA Double-Strand Breaks in Hepatocellular Carcinoma.

Authors:  Mikel Marín-Baquero; Ángel Rivera-Calzada; Juan P Unfried; Nerea Razquin; Eva M Martín-Cuevas; Sara de Bragança; Clara Aicart-Ramos; Christopher McCoy; Laura Prats-Mari; Raquel Arribas-Bosacoma; Linda Lee; Stefano Caruso; Jessica Zucman-Rossi; Bruno Sangro; Gareth Williams; Fernando Moreno-Herrero; Oscar Llorca; Susan P Lees-Miller; Puri Fortes
Journal:  Cancer Res       Date:  2021-07-28       Impact factor: 12.701

6.  High-Throughput Screening Platform for Nanoparticle-Mediated Alterations of DNA Repair Capacity.

Authors:  Sneh M Toprani; Dimitrios Bitounis; Qiansheng Huang; Nathalia Oliveira; Kee Woei Ng; Chor Yong Tay; Zachary D Nagel; Philip Demokritou
Journal:  ACS Nano       Date:  2021-03-12       Impact factor: 15.881

7.  Critical DNA damaging pathways in tumorigenesis.

Authors:  Jake A Kloeber; Zhenkun Lou
Journal:  Semin Cancer Biol       Date:  2021-04-24       Impact factor: 15.707

Review 8.  SEMMs: Somatically Engineered Mouse Models. A New Tool for In Vivo Disease Modeling for Basic and Translational Research.

Authors:  Anthony Lima; Danilo Maddalo
Journal:  Front Oncol       Date:  2021-04-23       Impact factor: 6.244

9.  Characterization of gross genome rearrangements in Deinococcus radiodurans recA mutants.

Authors:  Jelena Repar; Davor Zahradka; Ivan Sović; Ksenija Zahradka
Journal:  Sci Rep       Date:  2021-05-25       Impact factor: 4.379

10.  Comprehensive optimization of a reporter assay toolbox for three distinct CRISPR-Cas systems.

Authors:  Li Chen; Haoyuan Gao; Bing Zhou; Yu Wang
Journal:  FEBS Open Bio       Date:  2021-06-09       Impact factor: 2.693

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