Literature DB >> 25893160

OpenSim: a musculoskeletal modeling and simulation framework for in silico investigations and exchange.

Ajay Seth1, Michael Sherman1, Jeffrey A Reinbolt2, Scott L Delp3.   

Abstract

Movement science is driven by observation, but observation alone cannot elucidate principles of human and animal movement. Biomechanical modeling and computer simulation complement observations and inform experimental design. Biological models are complex and specialized software is required for building, validating, and studying them. Furthermore, common access is needed so that investigators can contribute models to a broader community and leverage past work. We are developing OpenSim, a freely available musculoskeletal modeling and simulation application and libraries specialized for these purposes, by providing: musculoskeletal modeling elements, such as biomechanical joints, muscle actuators, ligament forces, compliant contact, and controllers; and tools for fitting generic models to subject-specific data, performing inverse kinematics and forward dynamic simulations. OpenSim performs an array of physics-based analyses to delve into the behavior of musculoskeletal models by employing Simbody, an efficient and accurate multibody system dynamics code. Models are publicly available and are often reused for multiple investigations because they provide a rich set of behaviors that enables different lines of inquiry. This report will discuss one model developed to study walking and applied to gain deeper insights into muscle function in pathological gait and during running. We then illustrate how simulations can test fundamental hypotheses and focus the aims of in vivo experiments, with a postural stability platform and human model that provide a research environment for performing human posture experiments in silico. We encourage wide adoption of OpenSim for community exchange of biomechanical models and methods and welcome new contributors.

Entities:  

Keywords:  SimTK Simbody; Simbios biocomputation; biological joints; gait simulation; musculotendinous actuators; neuromuscular control; neuromusculoskeletal biomechanics

Year:  2011        PMID: 25893160      PMCID: PMC4397580          DOI: 10.1016/j.piutam.2011.04.021

Source DB:  PubMed          Journal:  Procedia IUTAM


  27 in total

Review 1.  Cerebellar control of balance and locomotion.

Authors:  Susanne M Morton; Amy J Bastian
Journal:  Neuroscientist       Date:  2004-06       Impact factor: 7.519

2.  A parameter optimization approach for the optimal control of large-scale musculoskeletal systems.

Authors:  M G Pandy; F C Anderson; D G Hull
Journal:  J Biomech Eng       Date:  1992-11       Impact factor: 2.097

3.  A model of the upper extremity for simulating musculoskeletal surgery and analyzing neuromuscular control.

Authors:  Katherine R S Holzbaur; Wendy M Murray; Scott L Delp
Journal:  Ann Biomed Eng       Date:  2005-06       Impact factor: 3.934

4.  A modified elastic foundation contact model for application in 3D models of the prosthetic knee.

Authors:  Antonio Pérez-González; Carlos Fenollosa-Esteve; Joaquín L Sancho-Bru; Francisco T Sánchez-Marín; Margarita Vergara; Pablo J Rodríguez-Cervantes
Journal:  Med Eng Phys       Date:  2007-05-21       Impact factor: 2.242

5.  An optimal control model for maximum-height human jumping.

Authors:  M G Pandy; F E Zajac; E Sim; W S Levine
Journal:  J Biomech       Date:  1990       Impact factor: 2.712

6.  Knee contact force in subjects with symmetrical OA grades: differences between OA severities.

Authors:  C Richards; J S Higginson
Journal:  J Biomech       Date:  2010-06-02       Impact factor: 2.712

7.  Hip contact forces and gait patterns from routine activities.

Authors:  G Bergmann; G Deuretzbacher; M Heller; F Graichen; A Rohlmann; J Strauss; G N Duda
Journal:  J Biomech       Date:  2001-07       Impact factor: 2.712

Review 8.  Determining muscle's force and action in multi-articular movement.

Authors:  F E Zajac; M E Gordon
Journal:  Exerc Sport Sci Rev       Date:  1989       Impact factor: 6.230

9.  Muscle contributions to support and progression during single-limb stance in crouch gait.

Authors:  Katherine M Steele; Ajay Seth; Jennifer L Hicks; Michael S Schwartz; Scott L Delp
Journal:  J Biomech       Date:  2010-05-20       Impact factor: 2.712

10.  Muscle contributions to support and progression over a range of walking speeds.

Authors:  May Q Liu; Frank C Anderson; Michael H Schwartz; Scott L Delp
Journal:  J Biomech       Date:  2008-09-25       Impact factor: 2.712

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  35 in total

1.  Simbios: an NIH national center for physics-based simulation of biological structures.

Authors:  Scott L Delp; Joy P Ku; Vijay S Pande; Michael A Sherman; Russ B Altman
Journal:  J Am Med Inform Assoc       Date:  2011-11-10       Impact factor: 4.497

2.  Is my model good enough? Best practices for verification and validation of musculoskeletal models and simulations of movement.

Authors:  Jennifer L Hicks; Thomas K Uchida; Ajay Seth; Apoorva Rajagopal; Scott L Delp
Journal:  J Biomech Eng       Date:  2015-01-26       Impact factor: 2.097

Review 3.  The influence of muscle-tendon forces on ACL loading during jump landing: a systematic review.

Authors:  Katja Oberhofer; S H Hosseini Nasab; Pascal Schütz; Barbara Postolka; Jess G Snedeker; William R Taylor; Renate List
Journal:  Muscles Ligaments Tendons J       Date:  2017-05-10

4.  Metabolic cost underlies task-dependent variations in motor unit recruitment.

Authors:  Adrian K M Lai; Andrew A Biewener; James M Wakeling
Journal:  J R Soc Interface       Date:  2018-11-21       Impact factor: 4.118

5.  How muscle fiber lengths and velocities affect muscle force generation as humans walk and run at different speeds.

Authors:  Edith M Arnold; Samuel R Hamner; Ajay Seth; Matthew Millard; Scott L Delp
Journal:  J Exp Biol       Date:  2013-03-07       Impact factor: 3.312

6.  Flexing computational muscle: modeling and simulation of musculotendon dynamics.

Authors:  Matthew Millard; Thomas Uchida; Ajay Seth; Scott L Delp
Journal:  J Biomech Eng       Date:  2013-02       Impact factor: 2.097

7.  Development and Application of a Novel Metric to Characterize Comprehensive Range of Motion of Reverse Total Shoulder Arthroplasty.

Authors:  Josie A Elwell; George S Athwal; Ryan Willing
Journal:  J Orthop Res       Date:  2019-11-22       Impact factor: 3.494

8.  Simbody: multibody dynamics for biomedical research.

Authors:  Michael A Sherman; Ajay Seth; Scott L Delp
Journal:  Procedia IUTAM       Date:  2011

9.  Introduction of a computer-based method for automated planning of reduction paths under consideration of simulated muscular forces.

Authors:  Jan Buschbaum; Rainer Fremd; Tim Pohlemann; Alexander Kristen
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-03-20       Impact factor: 2.924

10.  A rolling constraint reproduces ground reaction forces and moments in dynamic simulations of walking, running, and crouch gait.

Authors:  Samuel R Hamner; Ajay Seth; Katherine M Steele; Scott L Delp
Journal:  J Biomech       Date:  2013-05-21       Impact factor: 2.712

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