Literature DB >> 25878885

Crystal structure of (2-bromo-methyl-1-phenyl-sulfonyl-1H-indol-3-yl)(phen-yl)methanone.

M Umadevi1, V Saravanan2, R Yamuna3, A K Mohanakrishnan2, G Chakkaravarthi4.   

Abstract

In the title compound, C22H16BrNO3S, the phenyl rings make dihedral angles of 84.81 (16) and 61.67 (17)° with the indole ring system (r.m.s. deviation = 0.012 Å), while the phenyl rings are inclined to one another by 69.5 (2)°. The mol-ecular structure is stabilized by weak intra-molecular C-H⋯O hydrogen bonds. The sulfonyl S atom has a distorted tetra-hedral configuration. In the crystal, there are no significant inter-molecular inter-actions present.

Entities:  

Keywords:  (phen­yl)methanone; bromo­meth­yl; crystal structure; indole; intramolecular hydrogen bonds; phenyl­sulfon­yl

Year:  2015        PMID: 25878885      PMCID: PMC4384623          DOI: 10.1107/S2056989014028084

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Related literature

For the various biological properties of indole derivatives, see: Andreani et al. (2001 ▸); Bassindale (1984 ▸); Grinev et al. (1984 ▸); Porter et al. (1977 ▸); Rodriguez et al. (1985 ▸); Singh et al. (2000 ▸); Sundberg (1996 ▸). For the Thorpe–Ingold effect, see: Bassindale (1984 ▸). For the syntheses and crystal structures of similar compounds, see: Chakkaravarthi et al. (2008 ▸, 2009 ▸); Umadevi et al. (2013 ▸, 2014 ▸). For details concerning the Cambridge Structural Database, see: Groom & Allen (2014 ▸).

Experimental

Crystal data

C22H16BrNO3S M = 454.33 Monoclinic, a = 10.3629 (5) Å b = 13.4156 (7) Å c = 14.1777 (8) Å β = 92.864 (2)° V = 1968.59 (18) Å3 Z = 4 Mo Kα radiation μ = 2.22 mm−1 T = 295 K 0.26 × 0.22 × 0.20 mm

Data collection

Bruker Kappa APEXII CCD diffractometer Absorption correction: multi-scan (SADABS; Sheldrick, 1996 ▸) T min = 0.596, T max = 0.665 34711 measured reflections 5017 independent reflections 3002 reflections with I > 2σ(I) R int = 0.056

Refinement

R[F 2 > 2σ(F 2)] = 0.045 wR(F 2) = 0.146 S = 1.06 5017 reflections 253 parameters H-atom parameters constrained Δρmax = 0.38 e Å−3 Δρmin = −0.97 e Å−3

Data collection: APEX2 (Bruker, 2004 ▸); cell refinement: SAINT (Bruker, 2004 ▸); data reduction: SAINT; program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▸); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▸); molecular graphics: PLATON (Spek, 2009 ▸); software used to prepare material for publication: SHELXL97 and PLATON (Spek, 2009 ▸). Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989014028084/su5047sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989014028084/su5047Isup2.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989014028084/su5047Isup3.cml Click here for additional data file. . DOI: 10.1107/S2056989014028084/su5047fig1.tif The mol­ecular structure of the title compound, showing the atom labelling. Displacement ellipsoids are drawn at the 30% probability level. Click here for additional data file. a . DOI: 10.1107/S2056989014028084/su5047fig2.tif A view approximately along the a axis of the crystal packing of the title compound. CCDC reference: 1040945 Additional supporting information: crystallographic information; 3D view; checkCIF report
C22H16BrNO3SF(000) = 920
Mr = 454.33Dx = 1.533 Mg m3
Monoclinic, P21/nMo Kα radiation, λ = 0.71073 Å
Hall symbol: -P 2ynCell parameters from 8313 reflections
a = 10.3629 (5) Åθ = 2.3–23.1°
b = 13.4156 (7) ŵ = 2.22 mm1
c = 14.1777 (8) ÅT = 295 K
β = 92.864 (2)°Block, colourless
V = 1968.59 (18) Å30.26 × 0.22 × 0.20 mm
Z = 4
Bruker Kappa APEXII CCD diffractometer5017 independent reflections
Radiation source: fine-focus sealed tube3002 reflections with I > 2σ(I)
Graphite monochromatorRint = 0.056
ω and φ scanθmax = 28.6°, θmin = 2.1°
Absorption correction: multi-scan (SADABS; Sheldrick, 1996)h = −13→13
Tmin = 0.596, Tmax = 0.665k = −18→18
34711 measured reflectionsl = −19→14
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.045Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.146H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0515P)2 + 1.6826P] where P = (Fo2 + 2Fc2)/3
5017 reflections(Δ/σ)max < 0.001
253 parametersΔρmax = 0.38 e Å3
0 restraintsΔρmin = −0.97 e Å3
Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C10.4019 (3)0.3474 (2)0.6542 (2)0.0375 (7)
C20.4866 (3)0.4214 (3)0.6300 (3)0.0476 (8)
H20.56620.40560.60640.057*
C30.4506 (4)0.5192 (3)0.6415 (3)0.0609 (11)
H30.50670.57020.62620.073*
C40.3325 (4)0.5421 (3)0.6754 (3)0.0571 (10)
H40.30930.60840.68300.069*
C50.2489 (4)0.4687 (3)0.6980 (3)0.0583 (10)
H50.16880.48500.72050.070*
C60.2829 (3)0.3700 (3)0.6876 (3)0.0493 (9)
H60.22620.31940.70300.059*
C70.2714 (3)0.1711 (2)0.5076 (2)0.0374 (7)
C80.1644 (3)0.1550 (3)0.5608 (3)0.0479 (8)
H80.17020.15660.62640.057*
C90.0499 (3)0.1366 (3)0.5115 (3)0.0563 (10)
H9−0.02380.12530.54470.068*
C100.0403 (3)0.1341 (3)0.4142 (3)0.0587 (10)
H10−0.03940.12100.38360.070*
C110.1456 (3)0.1506 (3)0.3619 (3)0.0500 (9)
H110.13820.15000.29620.060*
C120.2641 (3)0.1684 (2)0.4096 (2)0.0381 (7)
C130.3916 (3)0.1867 (2)0.3780 (2)0.0382 (7)
C140.4730 (3)0.2001 (2)0.4550 (2)0.0365 (7)
C150.6139 (3)0.2080 (3)0.4556 (3)0.0461 (8)
H15A0.64440.25200.50620.055*
H15B0.63930.23620.39630.055*
C160.4326 (3)0.1888 (3)0.2792 (2)0.0451 (8)
C170.3870 (3)0.1104 (3)0.2123 (2)0.0437 (8)
C180.3509 (4)0.0169 (3)0.2420 (3)0.0511 (9)
H180.34860.00300.30620.061*
C190.3180 (4)−0.0558 (3)0.1765 (3)0.0663 (11)
H190.2937−0.11890.19620.080*
C200.3213 (5)−0.0347 (4)0.0816 (3)0.0753 (13)
H200.2992−0.08390.03750.090*
C210.3566 (5)0.0572 (4)0.0519 (3)0.0765 (14)
H210.35790.0709−0.01240.092*
C220.3903 (4)0.1298 (3)0.1165 (3)0.0595 (10)
H220.41550.19240.09600.071*
N10.4022 (2)0.1883 (2)0.53652 (18)0.0379 (6)
O10.3769 (2)0.16500 (18)0.70726 (16)0.0523 (6)
O20.5868 (2)0.21867 (18)0.65144 (17)0.0500 (6)
O30.5064 (3)0.2531 (2)0.25507 (19)0.0673 (8)
S10.44977 (8)0.22304 (6)0.64628 (6)0.0400 (2)
Br10.69179 (4)0.07623 (3)0.47354 (4)0.06721 (18)
U11U22U33U12U13U23
C10.0397 (16)0.0389 (17)0.0338 (16)−0.0043 (14)0.0000 (13)−0.0028 (13)
C20.0439 (18)0.047 (2)0.053 (2)−0.0059 (15)0.0085 (16)−0.0017 (16)
C30.065 (3)0.043 (2)0.075 (3)−0.0114 (19)0.011 (2)−0.0001 (19)
C40.072 (3)0.041 (2)0.059 (2)0.0008 (19)0.006 (2)−0.0039 (18)
C50.055 (2)0.055 (2)0.066 (3)0.0060 (19)0.0141 (19)−0.010 (2)
C60.048 (2)0.047 (2)0.054 (2)−0.0087 (16)0.0107 (16)−0.0060 (17)
C70.0337 (15)0.0378 (17)0.0403 (18)−0.0005 (13)−0.0024 (13)−0.0039 (14)
C80.0427 (18)0.057 (2)0.045 (2)−0.0028 (16)0.0077 (15)−0.0062 (17)
C90.0365 (18)0.067 (3)0.067 (3)−0.0023 (17)0.0126 (17)−0.008 (2)
C100.0331 (18)0.077 (3)0.065 (3)−0.0014 (18)−0.0076 (17)−0.005 (2)
C110.0391 (18)0.068 (2)0.0424 (19)0.0001 (17)−0.0070 (15)−0.0012 (17)
C120.0361 (16)0.0366 (17)0.0413 (18)0.0045 (13)−0.0005 (13)−0.0007 (14)
C130.0371 (16)0.0370 (17)0.0404 (18)−0.0005 (13)0.0003 (13)−0.0024 (14)
C140.0338 (15)0.0350 (17)0.0409 (18)−0.0013 (13)0.0038 (13)−0.0030 (13)
C150.0409 (18)0.046 (2)0.051 (2)−0.0076 (15)0.0020 (15)0.0005 (16)
C160.0419 (18)0.048 (2)0.045 (2)−0.0019 (15)0.0023 (15)0.0027 (16)
C170.0375 (17)0.054 (2)0.0398 (19)0.0025 (15)0.0026 (14)−0.0045 (16)
C180.057 (2)0.049 (2)0.047 (2)0.0036 (17)−0.0020 (16)−0.0013 (17)
C190.073 (3)0.053 (2)0.072 (3)0.003 (2)−0.003 (2)−0.011 (2)
C200.081 (3)0.080 (3)0.065 (3)0.006 (3)−0.004 (2)−0.028 (3)
C210.082 (3)0.108 (4)0.039 (2)−0.003 (3)−0.001 (2)−0.016 (2)
C220.064 (2)0.070 (3)0.045 (2)−0.005 (2)0.0068 (18)0.002 (2)
N10.0352 (13)0.0414 (15)0.0370 (14)−0.0019 (11)0.0005 (11)−0.0066 (12)
O10.0671 (16)0.0479 (15)0.0419 (14)−0.0081 (12)0.0011 (11)0.0074 (11)
O20.0431 (13)0.0536 (15)0.0518 (14)0.0059 (11)−0.0122 (11)−0.0047 (12)
O30.081 (2)0.0693 (19)0.0529 (16)−0.0295 (15)0.0130 (14)−0.0012 (14)
S10.0418 (4)0.0408 (5)0.0368 (4)−0.0016 (3)−0.0048 (3)−0.0001 (3)
Br10.0408 (2)0.0659 (3)0.0953 (4)0.01197 (18)0.0068 (2)0.0010 (2)
C1—C61.378 (5)C13—C141.357 (4)
C1—C21.379 (5)C13—C161.483 (5)
C1—S11.746 (3)C14—N11.409 (4)
C2—C31.377 (5)C14—C151.463 (4)
C2—H20.9300C15—Br11.955 (4)
C3—C41.371 (5)C15—H15A0.9700
C3—H30.9300C15—H15B0.9700
C4—C51.360 (5)C16—O31.213 (4)
C4—H40.9300C16—C171.479 (5)
C5—C61.380 (5)C17—C181.381 (5)
C5—H50.9300C17—C221.385 (5)
C6—H60.9300C18—C191.378 (5)
C7—C81.388 (4)C18—H180.9300
C7—C121.389 (4)C19—C201.376 (7)
C7—N11.415 (4)C19—H190.9300
C8—C91.370 (5)C20—C211.360 (7)
C8—H80.9300C20—H200.9300
C9—C101.378 (5)C21—C221.370 (6)
C9—H90.9300C21—H210.9300
C10—C111.368 (5)C22—H220.9300
C10—H100.9300N1—S11.675 (3)
C11—C121.392 (4)O1—S11.411 (2)
C11—H110.9300O2—S11.419 (2)
C12—C131.438 (4)
C6—C1—C2121.3 (3)C13—C14—N1108.5 (3)
C6—C1—S1119.6 (3)C13—C14—C15126.4 (3)
C2—C1—S1119.1 (3)N1—C14—C15124.3 (3)
C3—C2—C1118.5 (3)C14—C15—Br1109.9 (2)
C3—C2—H2120.8C14—C15—H15A109.7
C1—C2—H2120.8Br1—C15—H15A109.7
C4—C3—C2120.4 (4)C14—C15—H15B109.7
C4—C3—H3119.8Br1—C15—H15B109.7
C2—C3—H3119.8H15A—C15—H15B108.2
C5—C4—C3120.8 (4)O3—C16—C17120.6 (3)
C5—C4—H4119.6O3—C16—C13119.6 (3)
C3—C4—H4119.6C17—C16—C13119.7 (3)
C4—C5—C6120.0 (4)C18—C17—C22119.4 (3)
C4—C5—H5120.0C18—C17—C16122.2 (3)
C6—C5—H5120.0C22—C17—C16118.2 (3)
C1—C6—C5119.0 (3)C19—C18—C17119.9 (4)
C1—C6—H6120.5C19—C18—H18120.1
C5—C6—H6120.5C17—C18—H18120.1
C8—C7—C12122.3 (3)C20—C19—C18119.8 (4)
C8—C7—N1130.4 (3)C20—C19—H19120.1
C12—C7—N1107.3 (3)C18—C19—H19120.1
C9—C8—C7116.5 (3)C21—C20—C19120.6 (4)
C9—C8—H8121.7C21—C20—H20119.7
C7—C8—H8121.7C19—C20—H20119.7
C8—C9—C10122.2 (3)C20—C21—C22120.1 (4)
C8—C9—H9118.9C20—C21—H21120.0
C10—C9—H9118.9C22—C21—H21120.0
C11—C10—C9121.3 (3)C21—C22—C17120.3 (4)
C11—C10—H10119.4C21—C22—H22119.9
C9—C10—H10119.4C17—C22—H22119.9
C10—C11—C12118.2 (3)C14—N1—C7108.1 (2)
C10—C11—H11120.9C14—N1—S1126.2 (2)
C12—C11—H11120.9C7—N1—S1123.2 (2)
C7—C12—C11119.6 (3)O1—S1—O2120.70 (15)
C7—C12—C13107.6 (3)O1—S1—N1105.92 (14)
C11—C12—C13132.8 (3)O2—S1—N1106.48 (14)
C14—C13—C12108.4 (3)O1—S1—C1109.02 (15)
C14—C13—C16124.1 (3)O2—S1—C1108.82 (15)
C12—C13—C16127.5 (3)N1—S1—C1104.71 (14)
C6—C1—C2—C31.1 (5)O3—C16—C17—C18152.3 (4)
S1—C1—C2—C3−176.4 (3)C13—C16—C17—C18−25.4 (5)
C1—C2—C3—C4−0.7 (6)O3—C16—C17—C22−22.8 (5)
C2—C3—C4—C5−0.1 (6)C13—C16—C17—C22159.5 (3)
C3—C4—C5—C60.5 (6)C22—C17—C18—C19−0.2 (5)
C2—C1—C6—C5−0.8 (5)C16—C17—C18—C19−175.3 (4)
S1—C1—C6—C5176.7 (3)C17—C18—C19—C20−0.1 (6)
C4—C5—C6—C10.0 (6)C18—C19—C20—C210.0 (7)
C12—C7—C8—C9−0.4 (5)C19—C20—C21—C220.5 (8)
N1—C7—C8—C9−177.5 (3)C20—C21—C22—C17−0.8 (7)
C7—C8—C9—C10−0.1 (6)C18—C17—C22—C210.7 (6)
C8—C9—C10—C11−0.3 (7)C16—C17—C22—C21176.0 (4)
C9—C10—C11—C121.1 (6)C13—C14—N1—C7−2.4 (4)
C8—C7—C12—C111.2 (5)C15—C14—N1—C7−172.9 (3)
N1—C7—C12—C11178.9 (3)C13—C14—N1—S1−164.8 (2)
C8—C7—C12—C13−179.2 (3)C15—C14—N1—S124.7 (4)
N1—C7—C12—C13−1.5 (3)C8—C7—N1—C14179.9 (4)
C10—C11—C12—C7−1.5 (5)C12—C7—N1—C142.4 (3)
C10—C11—C12—C13179.0 (4)C8—C7—N1—S1−17.1 (5)
C7—C12—C13—C140.0 (4)C12—C7—N1—S1165.4 (2)
C11—C12—C13—C14179.5 (4)C14—N1—S1—O1−158.0 (3)
C7—C12—C13—C16178.5 (3)C7—N1—S1—O142.1 (3)
C11—C12—C13—C16−1.9 (6)C14—N1—S1—O2−28.4 (3)
C12—C13—C14—N11.5 (4)C7—N1—S1—O2171.7 (2)
C16—C13—C14—N1−177.1 (3)C14—N1—S1—C186.8 (3)
C12—C13—C14—C15171.7 (3)C7—N1—S1—C1−73.1 (3)
C16—C13—C14—C15−6.9 (5)C6—C1—S1—O1−21.0 (3)
C13—C14—C15—Br1−91.4 (4)C2—C1—S1—O1156.5 (3)
N1—C14—C15—Br177.3 (4)C6—C1—S1—O2−154.5 (3)
C14—C13—C16—O3−43.9 (5)C2—C1—S1—O223.0 (3)
C12—C13—C16—O3137.8 (4)C6—C1—S1—N192.0 (3)
C14—C13—C16—C17133.8 (3)C2—C1—S1—N1−90.5 (3)
C12—C13—C16—C17−44.5 (5)
D—H···AD—HH···AD···AD—H···A
C8—H8···O10.932.382.953 (4)120
C15—H15A···O20.972.222.808 (4)118
C15—H15B···O30.972.383.062 (5)127
Table 1

Hydrogen-bond geometry (, )

DHA DHHA D A DHA
C8H8O10.932.382.953(4)120
C15H15AO20.972.222.808(4)118
C15H15BO30.972.383.062(5)127
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Authors:  U P Singh; B K Sarma; P K Mishra; A B Ray
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Authors:  J K Porter; C W Bacon; J D Robbins; D S Himmelsbach; H C Higman
Journal:  J Agric Food Chem       Date:  1976 Jan-Feb       Impact factor: 5.279

3.  A short history of SHELX.

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Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

4.  The Cambridge Structural Database in retrospect and prospect.

Authors:  Colin R Groom; Frank H Allen
Journal:  Angew Chem Int Ed Engl       Date:  2014-01-02       Impact factor: 15.336

5.  Synthesis and antitumor activity of substituted 3-(5-imidazo[2,1-b]thiazolylmethylene)-2-indolinones.

Authors:  A Andreani; M Granaiola; A Leoni; A Locatelli; R Morigi; M Rambaldi; G Giorgi; L Salvini; V Garaliene
Journal:  Anticancer Drug Des       Date:  2001 Apr-Jun

6.  4-Bromo-meth-yl-1-phenyl-sulfon-yl-1H-indole.

Authors:  G Chakkaravarthi; Radhakrishnan Sureshbabu; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2008-03-29

7.  6-Meth-oxy-9-phenyl-sulfonyl-2-(2-thien-yl)-9H-thieno[2,3-b]carbazole.

Authors:  G Chakkaravarthi; A Marx; V Dhayalan; A K Mohanakrishnan; V Manivannan
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2009-02-06

8.  (Z)-3-(1-Chloro-prop-1-en-yl)-2-methyl-1-phenyl-sulfonyl-1H-indole.

Authors:  M Umadevi; V Saravanan; R Yamuna; A K Mohanakrishnan; G Chakkaravarthi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2013-11-16

9.  Crystal structure of 2-(2,4-di-chloro-phen-yl)-4-hydroxy-9-phenyl-sulfonyl-9H-carbazole-3-carbaldehyde.

Authors:  M Umadevi; B M Ramalingam; R Yamuna; A K Mohanakrishnan; G Chakkaravarthi
Journal:  Acta Crystallogr Sect E Struct Rep Online       Date:  2014-11-08

10.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  10 in total

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