Literature DB >> 21280662

Structural analysis of glycans by NMR chemical shift prediction.

Magnus Lundborg, Göran Widmalm.   

Abstract

Structural determination of N- and O-linked glycans as well as polysaccharides is hampered by the limited spectral dispersion. The computerized approach CASPER, an acronym for computer assisted spectrum evaluation of regular polysaccharides, uses liquid state NMR data to elucidate carbohydrate structure based on agreement with predicted (1)H and (13)C chemical shifts. We here demonstrate developments based on multiple through-bond J-based correlations that significantly enhance the credence to the sequence connectivities proposed in the analysis exemplified by an oligosaccharide and a bacterial polysaccharide. The approach is also suitable for predicting (1)H and (13)C NMR chemical shifts of synthesized oligosaccharides and glycoconjugates, thereby corroborating a proposed structure.

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Year:  2011        PMID: 21280662     DOI: 10.1021/ac1032534

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  31 in total

Review 1.  Glycan microarrays of fluorescently-tagged natural glycans.

Authors:  Xuezheng Song; Jamie Heimburg-Molinaro; David F Smith; Richard D Cummings
Journal:  Glycoconj J       Date:  2015-04-16       Impact factor: 2.916

2.  Explaining the Serological Characteristics of Streptococcus suis Serotypes 1 and 1/2 from Their Capsular Polysaccharide Structure and Biosynthesis.

Authors:  Marie-Rose Van Calsteren; Guillaume Goyette-Desjardins; Fleur Gagnon; Masatoshi Okura; Daisuke Takamatsu; René Roy; Marcelo Gottschalk; Mariela Segura
Journal:  J Biol Chem       Date:  2016-02-24       Impact factor: 5.157

3.  Carbohydrate-Carbohydrate Interactions Mediated by Sulfate Esters and Calcium Provide the Cell Adhesion Required for the Emergence of Early Metazoans.

Authors:  Eduardo Vilanova; Gustavo R C Santos; Rafael S Aquino; Juan J Valle-Delgado; Dario Anselmetti; Xavier Fernàndez-Busquets; Paulo A S Mourão
Journal:  J Biol Chem       Date:  2016-02-25       Impact factor: 5.157

4.  Cytoplasmic N-glycosyltransferase of Actinobacillus pleuropneumoniae is an inverting enzyme and recognizes the NX(S/T) consensus sequence.

Authors:  Flavio Schwarz; Yao-Yun Fan; Mario Schubert; Markus Aebi
Journal:  J Biol Chem       Date:  2011-08-18       Impact factor: 5.157

5.  First evidence for a covalent linkage between enterobacterial common antigen and lipopolysaccharide in Shigella sonnei phase II ECALPS.

Authors:  Tomasz K Gozdziewicz; Czeslaw Lugowski; Jolanta Lukasiewicz
Journal:  J Biol Chem       Date:  2018-07-20       Impact factor: 5.157

6.  Revised structures for the predominant O-polysaccharides expressed by Burkholderia pseudomallei and Burkholderia mallei.

Authors:  Christian Heiss; Mary N Burtnick; Rosemary A Roberts; Ian Black; Parastoo Azadi; Paul J Brett
Journal:  Carbohydr Res       Date:  2013-08-24       Impact factor: 2.104

7.  O2 sensing-associated glycosylation exposes the F-box-combining site of the Dictyostelium Skp1 subunit in E3 ubiquitin ligases.

Authors:  M Osman Sheikh; David Thieker; Gordon Chalmers; Christopher M Schafer; Mayumi Ishihara; Parastoo Azadi; Robert J Woods; John N Glushka; Brad Bendiak; James H Prestegard; Christopher M West
Journal:  J Biol Chem       Date:  2017-09-19       Impact factor: 5.157

8.  Biosynthesis of the polymannose lipopolysaccharide O-antigens from Escherichia coli serotypes O8 and O9a requires a unique combination of single- and multiple-active site mannosyltransferases.

Authors:  Laura K Greenfield; Michele R Richards; Jianjun Li; Warren W Wakarchuk; Todd L Lowary; Chris Whitfield
Journal:  J Biol Chem       Date:  2012-08-08       Impact factor: 5.157

9.  Structures of Exopolysaccharides Involved in Receptor-mediated Perception of Mesorhizobium loti by Lotus japonicus.

Authors:  Artur Muszyński; Christian Heiss; Christian T Hjuler; John T Sullivan; Simon J Kelly; Mikkel B Thygesen; Jens Stougaard; Parastoo Azadi; Russell W Carlson; Clive W Ronson
Journal:  J Biol Chem       Date:  2016-08-08       Impact factor: 5.157

10.  An enzyme-based protocol for cell-free synthesis of nature-identical capsular oligosaccharides from Actinobacillus pleuropneumoniae serotype 1.

Authors:  Insa Budde; Christa Litschko; Jana I Führing; Rita Gerardy-Schahn; Mario Schubert; Timm Fiebig
Journal:  J Biol Chem       Date:  2020-03-09       Impact factor: 5.157

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