Literature DB >> 25877162

Making variability less variable: matching expression system and host for oxygenase-based biotransformations.

Martin Lindmeyer1, Daniel Meyer, Daniel Kuhn, Bruno Bühler, Andreas Schmid.   

Abstract

Variability in whole-cell biocatalyst performance represents a critical aspect for stable and productive bioprocessing. In order to investigate whether and how oxygenase-catalyzed reactions are affected by such variability issues in solvent-tolerant Pseudomonas, different inducers, expression systems, and host strains were tested for the reproducibility of xylene and styrene monooxygenase catalyzed hydroxylation and epoxidation reactions, respectively. Significantly higher activity variations were found for biocatalysts based on solvent-tolerant Pseudomonas putida DOT-TIE and S12 compared with solvent-sensitive P. putida KT2440, Escherichia coli JM101, and solvent-tolerant Pseudomonas taiwanensis VLB120. Specific styrene epoxidation rates corresponded to cellular styrene monooxygenase contents. Detected variations in activity strictly depended on the type of regulatory system employed, being high with the alk- and low with the lac-system. These results show that the occurrence of clonal variability in recombinant gene expression in Pseudomonas depends on the combination of regulatory system and host strain, does not correlate with a general phenotype such as solvent tolerance, and must be evaluated case by case.

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Year:  2015        PMID: 25877162     DOI: 10.1007/s10295-015-1615-8

Source DB:  PubMed          Journal:  J Ind Microbiol Biotechnol        ISSN: 1367-5435            Impact factor:   3.346


  54 in total

Review 1.  Microbial cell individuality and the underlying sources of heterogeneity.

Authors:  Simon V Avery
Journal:  Nat Rev Microbiol       Date:  2006-08       Impact factor: 60.633

Review 2.  Microbial biocatalytic processes and their development.

Authors:  John M Woodley
Journal:  Adv Appl Microbiol       Date:  2006       Impact factor: 5.086

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Authors:  D A Siegele; J C Hu
Journal:  Proc Natl Acad Sci U S A       Date:  1997-07-22       Impact factor: 11.205

4.  Response of Pseudomonas putida KT2440 to increased NADH and ATP demand.

Authors:  Birgitta E Ebert; Felix Kurth; Marcel Grund; Lars M Blank; Andreas Schmid
Journal:  Appl Environ Microbiol       Date:  2011-07-29       Impact factor: 4.792

5.  Involvement of the cis/trans isomerase Cti in solvent resistance of Pseudomonas putida DOT-T1E.

Authors:  F Junker; J L Ramos
Journal:  J Bacteriol       Date:  1999-09       Impact factor: 3.490

6.  A positive feedback mechanism controls expression of AlkS, the transcriptional regulator of the Pseudomonas oleovorans alkane degradation pathway.

Authors:  I Canosa; J M Sánchez-Romero; L Yuste; F Rojo
Journal:  Mol Microbiol       Date:  2000-02       Impact factor: 3.501

7.  Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.

Authors:  K E Nelson; C Weinel; I T Paulsen; R J Dodson; H Hilbert; V A P Martins dos Santos; D E Fouts; S R Gill; M Pop; M Holmes; L Brinkac; M Beanan; R T DeBoy; S Daugherty; J Kolonay; R Madupu; W Nelson; O White; J Peterson; H Khouri; I Hance; P Chris Lee; E Holtzapple; D Scanlan; K Tran; A Moazzez; T Utterback; M Rizzo; K Lee; D Kosack; D Moestl; H Wedler; J Lauber; D Stjepandic; J Hoheisel; M Straetz; S Heim; C Kiewitz; J A Eisen; K N Timmis; A Düsterhöft; B Tümmler; C M Fraser
Journal:  Environ Microbiol       Date:  2002-12       Impact factor: 5.491

8.  Characterization of a biofilm membrane reactor and its prospects for fine chemical synthesis.

Authors:  Rainer Gross; Karsten Lang; Katja Bühler; Andreas Schmid
Journal:  Biotechnol Bioeng       Date:  2010-03-01       Impact factor: 4.530

9.  Studies on transformation of Escherichia coli with plasmids.

Authors:  D Hanahan
Journal:  J Mol Biol       Date:  1983-06-05       Impact factor: 5.469

10.  Analysis of fluorescent reporters indicates heterogeneity in glucose uptake and utilization in clonal bacterial populations.

Authors:  Nela Nikolic; Thomas Barner; Martin Ackermann
Journal:  BMC Microbiol       Date:  2013-11-15       Impact factor: 3.605

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  1 in total

1.  Variability in subpopulation formation propagates into biocatalytic variability of engineered Pseudomonas putida strains.

Authors:  Martin Lindmeyer; Michael Jahn; Carsten Vorpahl; Susann Müller; Andreas Schmid; Bruno Bühler
Journal:  Front Microbiol       Date:  2015-10-01       Impact factor: 5.640

  1 in total

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