Literature DB >> 25866267

Peptide aptamers: development and applications.

Sergey Reverdatto, David S Burz, Alexander Shekhtman1.   

Abstract

Peptide aptamers are small combinatorial proteins that are selected to bind to specific sites on their target molecules. Peptide aptamers consist of short, 5-20 amino acid residues long sequences, typically embedded as a loop within a stable protein scaffold. Various peptide aptamer scaffolds and in vitro and in vivo selection techniques are reviewed with emphasis on specific biomedical, bioimaging, and bioanalytical applications.

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Year:  2015        PMID: 25866267      PMCID: PMC4428161          DOI: 10.2174/1568026615666150413153143

Source DB:  PubMed          Journal:  Curr Top Med Chem        ISSN: 1568-0266            Impact factor:   3.295


  232 in total

1.  Blockade of RAGE-amphoterin signalling suppresses tumour growth and metastases.

Authors:  A Taguchi; D C Blood; G del Toro; A Canet; D C Lee; W Qu; N Tanji; Y Lu; E Lalla; C Fu; M A Hofmann; T Kislinger; M Ingram; A Lu; H Tanaka; O Hori; S Ogawa; D M Stern; A M Schmidt
Journal:  Nature       Date:  2000-05-18       Impact factor: 49.962

Review 2.  A new generation of protein display scaffolds for molecular recognition.

Authors:  Ralf J Hosse; Achim Rothe; Barbara E Power
Journal:  Protein Sci       Date:  2006-01       Impact factor: 6.725

3.  T7 lytic phage-displayed peptide libraries exhibit less sequence bias than M13 filamentous phage-displayed peptide libraries.

Authors:  Lauren R H Krumpe; Andrew J Atkinson; Gary W Smythers; Andrea Kandel; Kathryn M Schumacher; James B McMahon; Lee Makowski; Toshiyuki Mori
Journal:  Proteomics       Date:  2006-08       Impact factor: 3.984

4.  Ribosome display: selecting and evolving proteins in vitro that specifically bind to a target.

Authors:  Christian Zahnd; Patrick Amstutz; Andreas Plückthun
Journal:  Nat Methods       Date:  2007-03       Impact factor: 28.547

Review 5.  Novel protein scaffolds as emerging therapeutic proteins: from discovery to clinical proof-of-concept.

Authors:  Thierry Wurch; Alain Pierré; Stéphane Depil
Journal:  Trends Biotechnol       Date:  2012-09-01       Impact factor: 19.536

6.  Highly diverse protein library based on the ubiquitous (β/α)₈ enzyme fold yields well-structured proteins through in vitro folding selection.

Authors:  Misha V Golynskiy; John C Haugner; Burckhard Seelig
Journal:  Chembiochem       Date:  2013-08-16       Impact factor: 3.164

7.  Structural basis for the interaction of a vascular endothelial growth factor mimic peptide motif and its corresponding receptors.

Authors:  Ricardo J Giordano; Cristiane D Anobom; Marina Cardó-Vila; Jorge Kalil; Ana P Valente; Renata Pasqualini; Fabio C L Almeida; Wadih Arap
Journal:  Chem Biol       Date:  2005-10

8.  Directed evolution of angiotensin II-inhibiting peptides using a microbead display.

Authors:  Rui Gan; Seiji Furuzawa; Takaaki Kojima; Kei Kanie; Ryuji Kato; Mina Okochi; Hiroyuki Honda; Hideo Nakano
Journal:  J Biosci Bioeng       Date:  2009-11-14       Impact factor: 2.894

9.  Biosynthesis and biological screening of a genetically encoded library based on the cyclotide MCoTI-I.

Authors:  Jeffrey Austin; Wan Wang; Swamy Puttamadappa; Alexander Shekhtman; Julio A Camarero
Journal:  Chembiochem       Date:  2009-11-02       Impact factor: 3.164

Review 10.  Current progress on aptamer-targeted oligonucleotide therapeutics.

Authors:  Justin P Dassie; Paloma H Giangrande
Journal:  Ther Deliv       Date:  2013-12
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  41 in total

1.  Aptamer Recognition of Multiplexed Small-Molecule-Functionalized Substrates.

Authors:  Nako Nakatsuka; Huan H Cao; Stephanie Deshayes; Arin L Melkonian; Andrea M Kasko; Paul S Weiss; Anne M Andrews
Journal:  ACS Appl Mater Interfaces       Date:  2018-07-06       Impact factor: 9.229

2.  FaptaSyme: A Strategy for Converting a Monomer/Oligomer-Nonselective Aptameric Sensor into an Oligomer-Selective One.

Authors:  Baggio A Evangelista; Yoon-Seong Kim; Dmitry M Kolpashchikov
Journal:  Chembiochem       Date:  2018-04-26       Impact factor: 3.164

3.  Molecular modeling and experimental study of a new peptide-based microextraction fiber for preconcentrating morphine in urine samples.

Authors:  Bamdad Riahi-Zanjani; Mahdi Balali-Mood; Zarrin Es'haghi; Ahmad Asoodeh; Adel Ghorani-Azam
Journal:  J Mol Model       Date:  2019-02-08       Impact factor: 1.810

Review 4.  Electrochemical biosensors for pathogen detection.

Authors:  Ellen Cesewski; Blake N Johnson
Journal:  Biosens Bioelectron       Date:  2020-04-12       Impact factor: 10.618

Review 5.  Protein-Catalyzed Capture Agents.

Authors:  Heather D Agnew; Matthew B Coppock; Matthew N Idso; Bert T Lai; JingXin Liang; Amy M McCarthy-Torrens; Carmen M Warren; James R Heath
Journal:  Chem Rev       Date:  2019-03-06       Impact factor: 60.622

Review 6.  A review on peptide functionalized graphene derivatives as nanotools for biosensing.

Authors:  Shubhi Joshi; Pratibha Sharma; Ruby Siddiqui; Kanica Kaushal; Shweta Sharma; Gaurav Verma; Avneet Saini
Journal:  Mikrochim Acta       Date:  2019-12-06       Impact factor: 5.833

Review 7.  From Small Molecules Toward Whole Cells Detection: Application of Electrochemical Aptasensors in Modern Medical Diagnostics.

Authors:  Robert Ziółkowski; Marta Jarczewska; Łukasz Górski; Elżbieta Malinowska
Journal:  Sensors (Basel)       Date:  2021-01-21       Impact factor: 3.576

Review 8.  Go in! Go out! Inducible control of nuclear localization.

Authors:  Barbara Di Ventura; Brian Kuhlman
Journal:  Curr Opin Chem Biol       Date:  2016-06-30       Impact factor: 8.822

Review 9.  Applying high-dimensional single-cell technologies to the analysis of cancer immunotherapy.

Authors:  Satyen H Gohil; J Bryan Iorgulescu; David A Braun; Derin B Keskin; Kenneth J Livak
Journal:  Nat Rev Clin Oncol       Date:  2020-12-04       Impact factor: 66.675

10.  Toward Development of a Label-Free Detection Technique for Microfluidic Fluorometric Peptide-Based Biosensor Systems.

Authors:  Nikita Sitkov; Tatiana Zimina; Alexander Kolobov; Vladimir Karasev; Alexander Romanov; Viktor Luchinin; Dmitry Kaplun
Journal:  Micromachines (Basel)       Date:  2021-06-13       Impact factor: 2.891

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