Literature DB >> 30734871

Molecular modeling and experimental study of a new peptide-based microextraction fiber for preconcentrating morphine in urine samples.

Bamdad Riahi-Zanjani1, Mahdi Balali-Mood2, Zarrin Es'haghi3, Ahmad Asoodeh4, Adel Ghorani-Azam5.   

Abstract

Antimicrobial peptides (AMPs) are best known for their bactericidal properties; however, due to their unique and flexible structures, they have also been proposed as potential selective sorbents for specific molecules. In the present study, we aimed to design and produce a new peptide-based microextraction fiber for preconcentrating morphine in urine samples. The binding of morphine to the peptide was first evaluated by computational simulation using the Molecular Operating Environment (MOE) 2015.10 software. A similar study was then performed using DS BIOVIA Materials Studio 2017 v17.1.0.48, which confirmed the results of the simulation carried out with MOE. Afterwards, those results were also confirmed by experimental research. In the experimental evaluation, carbon nanotubes (CNTs) were initially carboxylated with H2SO4/HNO3 (3:1) and then functionalized with the peptide. FTIR analysis, Raman measurements, and SEM imaging were used to confirm that CNT functionalization was successful as well as to check the nanostructure of the fiber. To evaluate the functionality of the fiber, it was inserted into a microtube containing a urine sample that included morphine and then sonicated for 5 min at 40 °C. Afterwards, the fiber was washed with methanol 20% (H2O/methanol) and the resulting sample was analyzed by HPLC. This procedure was repeated for different concentrations of morphine in the urine sample. The computational and experimental results showed that a morphine concentration as low as 0.25 ppb in urine could be adsorbed and detected using the peptide fiber. Therefore, given its semi-selective binding affinity for morphine, this peptide-based fiber can be considered a new approach to the detection of small amounts of morphine in biological samples.

Entities:  

Keywords:  Antimicrobial peptides; Chemical structure; Computational simulation; Microextraction fiber; Molecular docking

Mesh:

Substances:

Year:  2019        PMID: 30734871     DOI: 10.1007/s00894-019-3925-7

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  19 in total

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Review 2.  Peptide aptamers: development and applications.

Authors:  Sergey Reverdatto; David S Burz; Alexander Shekhtman
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3.  A practical approach to determine cutoff concentrations for opiate testing with simultaneous detection of codeine, morphine, and 6-acetylmorphine in urine.

Authors:  B D Paul; E T Shimomura; M L Smith
Journal:  Clin Chem       Date:  1999-04       Impact factor: 8.327

Review 4.  Use of synthetic peptides for the detection and quantification of autoantibodies.

Authors:  K B Elkon
Journal:  Mol Biol Rep       Date:  1992-06       Impact factor: 2.316

5.  A simplified procedure for the determination of free codeine, free morphine, and 6-acetylmorphine in urine.

Authors:  D C Fuller; W H Anderson
Journal:  J Anal Toxicol       Date:  1992 Sep-Oct       Impact factor: 3.367

6.  Purification and modeling amphipathic alpha helical antimicrobial peptides from skin secretions of Euphlyctis cyanophlyctis.

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Journal:  Chem Biol Drug Des       Date:  2014-04       Impact factor: 2.817

Review 7.  An intimate link between antimicrobial peptide sequence diversity and binding to essential components of bacterial membranes.

Authors:  Paulina Schmitt; Rafael D Rosa; Delphine Destoumieux-Garzón
Journal:  Biochim Biophys Acta       Date:  2015-10-21

8.  Surface-immobilized peptide aptamers as probe molecules for protein detection.

Authors:  Steven Johnson; David Evans; Sophie Laurenson; Debjani Paul; A Giles Davies; Paul Ko Ferrigno; Christoph Wälti
Journal:  Anal Chem       Date:  2008-01-11       Impact factor: 6.986

9.  Solid-phase microextraction fiber development for sampling and analysis of volatile organohalogen compounds in air.

Authors:  Seyed Ghavameddin Attari; Abdolrahman Bahrami; Farshid Ghorbani Shahna; Mahmoud Heidari
Journal:  J Environ Health Sci Eng       Date:  2014-09-17

10.  Comparison of liquid-liquid extraction-thin layer chromatography with solid-phase extraction-high-performance thin layer chromatography in detection of urinary morphine.

Authors:  Ali Ahadi; Alireza Partoazar; Mohammad-Hassan Abedi-Khorasgani; Seyed Vahid Shetab-Boushehri
Journal:  J Biomed Res       Date:  2011-09
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  1 in total

1.  Nanoparticles and nanoformulated drugs as promising delivery system in treatment of microbial-induced CNS infection: a systematic review of literature.

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Journal:  J Neurovirol       Date:  2021-07-05       Impact factor: 2.643

  1 in total

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