Literature DB >> 25865891

Cellular Levels of Signaling Factors Are Sensed by β-actin Alleles to Modulate Transcriptional Pulse Intensity.

Alon Kalo1, Itamar Kanter1, Amit Shraga1, Jonathan Sheinberger1, Hadar Tzemach1, Noa Kinor1, Robert H Singer2, Timothée Lionnet3, Yaron Shav-Tal4.   

Abstract

The transcriptional response of β-actin to extra-cellular stimuli is a paradigm for transcription factor complex assembly and regulation. Serum induction leads to a precisely timed pulse of β-actin transcription in the cell population. Actin protein is proposed to be involved in this response, but it is not known whether cellular actin levels affect nuclear β-actin transcription. We perturbed the levels of key signaling factors and examined the effect on the induced transcriptional pulse by following endogenous β-actin alleles in single living cells. Lowering serum response factor (SRF) protein levels leads to loss of pulse integrity, whereas reducing actin protein levels reveals positive feedback regulation, resulting in elevated gene activation and a prolonged transcriptional response. Thus, transcriptional pulse fidelity requires regulated amounts of signaling proteins, and perturbations in factor levels eliminate the physiological response, resulting in either tuning down or exaggeration of the transcriptional pulse.
Copyright © 2015 The Authors. Published by Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 25865891      PMCID: PMC4743029          DOI: 10.1016/j.celrep.2015.03.039

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  41 in total

1.  Direct visualization of a protein nuclear architecture.

Authors:  M J Hendzel; F Boisvert; D P Bazett-Jones
Journal:  Mol Biol Cell       Date:  1999-06       Impact factor: 4.138

2.  Tracking down the different forms of nuclear actin.

Authors:  Brigitte M Jockusch; Cora-Ann Schoenenberger; Jörg Stetefeld; Ueli Aebi
Journal:  Trends Cell Biol       Date:  2006-07-07       Impact factor: 20.808

3.  In vivo dynamics of RNA polymerase II transcription.

Authors:  Xavier Darzacq; Yaron Shav-Tal; Valeria de Turris; Yehuda Brody; Shailesh M Shenoy; Robert D Phair; Robert H Singer
Journal:  Nat Struct Mol Biol       Date:  2007-08-05       Impact factor: 15.369

4.  Visualization of single RNA transcripts in situ.

Authors:  A M Femino; F S Fay; K Fogarty; R H Singer
Journal:  Science       Date:  1998-04-24       Impact factor: 47.728

5.  Signal-regulated activation of serum response factor is mediated by changes in actin dynamics.

Authors:  A Sotiropoulos; D Gineitis; J Copeland; R Treisman
Journal:  Cell       Date:  1999-07-23       Impact factor: 41.582

Review 6.  Actin' together: serum response factor, its cofactors and the link to signal transduction.

Authors:  Guido Posern; Richard Treisman
Journal:  Trends Cell Biol       Date:  2006-10-10       Impact factor: 20.808

Review 7.  Serum response factor: master regulator of the actin cytoskeleton and contractile apparatus.

Authors:  Joseph M Miano; Xiaochun Long; Keigi Fujiwara
Journal:  Am J Physiol Cell Physiol       Date:  2006-08-23       Impact factor: 4.249

8.  Nuclear actin regulates dynamic subcellular localization and activity of the SRF cofactor MAL.

Authors:  Maria K Vartiainen; Sebastian Guettler; Banafshe Larijani; Richard Treisman
Journal:  Science       Date:  2007-06-22       Impact factor: 47.728

Review 9.  Imaging transcription in living cells.

Authors:  Xavier Darzacq; Jie Yao; Daniel R Larson; Sébastien Z Causse; Lana Bosanac; Valeria de Turris; Vera M Ruda; Timothee Lionnet; Daniel Zenklusen; Benjamin Guglielmi; Robert Tjian; Robert H Singer
Journal:  Annu Rev Biophys       Date:  2009       Impact factor: 12.981

10.  Nucleoplasmic beta-actin exists in a dynamic equilibrium between low-mobility polymeric species and rapidly diffusing populations.

Authors:  Darin McDonald; Gustavo Carrero; Christi Andrin; Gerda de Vries; Michael J Hendzel
Journal:  J Cell Biol       Date:  2006-02-13       Impact factor: 10.539

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  20 in total

1.  Visualizing nuclear RNAi activity in single living human cells.

Authors:  Shira Avivi; Amir Mor; Iris Dotan; Sivan Tzadok; Itamar Kanter; Noa Kinor; Dan Canaani; Yaron Shav-Tal
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-03       Impact factor: 11.205

2.  GRAF3 serves as a blood volume-sensitive rheostat to control smooth muscle contractility and blood pressure.

Authors:  Xue Bai; Kevin Mangum; Masao Kakoki; Oliver Smithies; Christopher P Mack; Joan M Taylor
Journal:  Small GTPases       Date:  2018-01-07

3.  Allosteric conformational ensembles have unlimited capacity for integrating information.

Authors:  John W Biddle; Rosa Martinez-Corral; Felix Wong; Jeremy Gunawardena
Journal:  Elife       Date:  2021-06-09       Impact factor: 8.140

4.  RNA Polymerase II cluster dynamics predict mRNA output in living cells.

Authors:  Won-Ki Cho; Namrata Jayanth; Brian P English; Takuma Inoue; J Owen Andrews; William Conway; Jonathan B Grimm; Jan-Hendrik Spille; Luke D Lavis; Timothée Lionnet; Ibrahim I Cisse
Journal:  Elife       Date:  2016-05-03       Impact factor: 8.140

5.  Enhancer Regulation of Transcriptional Bursting Parameters Revealed by Forced Chromatin Looping.

Authors:  Caroline R Bartman; Sarah C Hsu; Chris C-S Hsiung; Arjun Raj; Gerd A Blobel
Journal:  Mol Cell       Date:  2016-04-07       Impact factor: 17.970

Review 6.  Imaging Transcription: Past, Present, and Future.

Authors:  Robert A Coleman; Zhe Liu; Xavier Darzacq; Robert Tjian; Robert H Singer; Timothée Lionnet
Journal:  Cold Spring Harb Symp Quant Biol       Date:  2016-01-13

7.  Genome-wide co-localization of active EGFR and downstream ERK pathway kinases mirrors mitogen-inducible RNA polymerase 2 genomic occupancy.

Authors:  M Mikula; M Skrzypczak; K Goryca; K Paczkowska; J K Ledwon; M Statkiewicz; M Kulecka; M Grzelak; M Dabrowska; U Kuklinska; J Karczmarski; I Rumienczyk; K Jastrzebski; M Miaczynska; K Ginalski; K Bomsztyk; J Ostrowski
Journal:  Nucleic Acids Res       Date:  2016-09-01       Impact factor: 16.971

8.  Quantifying β-catenin subcellular dynamics and cyclin D1 mRNA transcription during Wnt signaling in single living cells.

Authors:  Pinhas Kafri; Sarah E Hasenson; Itamar Kanter; Jonathan Sheinberger; Noa Kinor; Sharon Yunger; Yaron Shav-Tal
Journal:  Elife       Date:  2016-11-23       Impact factor: 8.140

9.  Altering transcription factor binding reveals comprehensive transcriptional kinetics of a basic gene.

Authors:  Achim P Popp; Johannes Hettich; J Christof M Gebhardt
Journal:  Nucleic Acids Res       Date:  2021-06-21       Impact factor: 16.971

10.  Transcriptional Output Transiently Spikes Upon Mitotic Exit.

Authors:  Viola Vaňková Hausnerová; Christian Lanctôt
Journal:  Sci Rep       Date:  2017-10-03       Impact factor: 4.379

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