Literature DB >> 25864047

Direct visualization of vaults within intact cells by electron cryo-tomography.

Cora L Woodward1, Luiza M Mendonça, Grant J Jensen.   

Abstract

The vault complex is the largest cellular ribonucleoprotein complex ever characterized and is present across diverse Eukarya. Despite significant information regarding the structure, composition and evolutionary conservation of the vault, little is know about the complex's actual biological function. To determine if intracellular vaults are morphologically similar to previously studied purified and recombinant vaults, we have used electron cryo-tomography to characterize the vault complexes found in the thin edges of primary human cells growing in tissue culture. Our studies confirm that intracellular vaults are similar in overall size and shape to purified and recombinant vaults previously analyzed. Results from subtomogram averaging indicate that densities within the vault lumen are not ordered, but randomly distributed. We also observe that vaults located in the extreme periphery of the cytoplasm predominately associate with granule-like structures and actin. Our ultrastructure studies augment existing biochemical, structural and genetic information on the vault, and provide important intracellular context for the ongoing efforts to understand the biological function of the native cytoplasmic vault.

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Year:  2015        PMID: 25864047      PMCID: PMC4898762          DOI: 10.1007/s00018-015-1898-y

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  32 in total

Review 1.  Electron tomography of cells.

Authors:  Lu Gan; Grant J Jensen
Journal:  Q Rev Biophys       Date:  2011-11-15       Impact factor: 5.318

Review 2.  Getting RNA and protein in phase.

Authors:  Stephanie C Weber; Clifford P Brangwynne
Journal:  Cell       Date:  2012-06-08       Impact factor: 41.582

3.  Major vault protein: a virus-induced host factor against viral replication through the induction of type-I interferon.

Authors:  Shi Liu; Qian Hao; Nanfang Peng; Xin Yue; Yu Wang; Yanni Chen; Jianguo Wu; Ying Zhu
Journal:  Hepatology       Date:  2012-06-01       Impact factor: 17.425

4.  Dictyostelium vaults: disruption of the major proteins reveals growth and morphological defects and uncovers a new associated protein.

Authors:  S K Vasu; L H Rome
Journal:  J Biol Chem       Date:  1995-07-14       Impact factor: 5.157

5.  The 193-kD vault protein, VPARP, is a novel poly(ADP-ribose) polymerase.

Authors:  V A Kickhoefer; A C Siva; N L Kedersha; E M Inman; C Ruland; M Streuli; L H Rome
Journal:  J Cell Biol       Date:  1999-09-06       Impact factor: 10.539

6.  Vaults. III. Vault ribonucleoprotein particles open into flower-like structures with octagonal symmetry.

Authors:  N L Kedersha; J E Heuser; D C Chugani; L H Rome
Journal:  J Cell Biol       Date:  1991-01       Impact factor: 10.539

7.  Vaults. II. Ribonucleoprotein structures are highly conserved among higher and lower eukaryotes.

Authors:  N L Kedersha; M C Miquel; D Bittner; L H Rome
Journal:  J Cell Biol       Date:  1990-04       Impact factor: 10.539

Review 8.  Structural studies of large nucleoprotein particles, vaults.

Authors:  Hideaki Tanaka; Tomitake Tsukihara
Journal:  Proc Jpn Acad Ser B Phys Biol Sci       Date:  2012       Impact factor: 3.493

9.  Subtractive hybridization identifies novel differentially expressed ncRNA species in EBV-infected human B cells.

Authors:  Jan Mrázek; Simone B Kreutmayer; Friedrich A Grässer; Norbert Polacek; Alexander Hüttenhofer
Journal:  Nucleic Acids Res       Date:  2007-05-03       Impact factor: 16.971

10.  Rapid evolution of PARP genes suggests a broad role for ADP-ribosylation in host-virus conflicts.

Authors:  Matthew D Daugherty; Janet M Young; Julie A Kerns; Harmit S Malik
Journal:  PLoS Genet       Date:  2014-05-29       Impact factor: 5.917

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  7 in total

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Authors:  Karen L Anderson; Christopher Page; Mark F Swift; Dorit Hanein; Niels Volkmann
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Review 2.  Cellular and Structural Studies of Eukaryotic Cells by Cryo-Electron Tomography.

Authors:  Miriam Sarah Weber; Matthias Wojtynek; Ohad Medalia
Journal:  Cells       Date:  2019-01-16       Impact factor: 6.600

3.  Symmetry disruption commits vault particles to disassembly.

Authors:  Pablo Guerra; María González-Alamos; Aida Llauró; Arnau Casañas; Jordi Querol-Audí; Pedro J de Pablo; Núria Verdaguer
Journal:  Sci Adv       Date:  2022-02-09       Impact factor: 14.136

Review 4.  Beyond PARP1: The Potential of Other Members of the Poly (ADP-Ribose) Polymerase Family in DNA Repair and Cancer Therapeutics.

Authors:  Iain A Richard; Joshua T Burgess; Kenneth J O'Byrne; Emma Bolderson
Journal:  Front Cell Dev Biol       Date:  2022-01-14

5.  Cellular electron cryo tomography and in situ sub-volume averaging reveal the context of microtubule-based processes.

Authors:  Michael Grange; Daven Vasishtan; Kay Grünewald
Journal:  J Struct Biol       Date:  2016-06-30       Impact factor: 2.867

6.  3D visualization of mitochondrial solid-phase calcium stores in whole cells.

Authors:  Sharon Grayer Wolf; Yael Mutsafi; Tali Dadosh; Tal Ilani; Zipora Lansky; Ben Horowitz; Sarah Rubin; Michael Elbaum; Deborah Fass
Journal:  Elife       Date:  2017-11-06       Impact factor: 8.140

7.  Correlated cryogenic fluorescence microscopy and electron cryo-tomography shows that exogenous TRIM5α can form hexagonal lattices or autophagy aggregates in vivo.

Authors:  Stephen D Carter; João I Mamede; Thomas J Hope; Grant J Jensen
Journal:  Proc Natl Acad Sci U S A       Date:  2020-11-05       Impact factor: 11.205

  7 in total

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