| Literature DB >> 25852987 |
Kimiko Yamamoto-Tamura1, Syuntaro Hiradate1, Takashi Watanabe1, Motoo Koitabashi1, Yuka Sameshima-Yamashita1, Tohru Yarimizu1, Hiroko Kitamoto1.
Abstract
The relationship between degradation speed of soil-buried biodegradable polyester film in a farmland and the characteristics of the predominant polyester-degrading soil microorganisms and enzymes were investigated to determine the BP-degrading ability of cultivated soils through characterization of the basal microbial activities and their transition in soils during BP film degradation. Degradation of poly(butylene succinate-co-adipate) (PBSA) film was evaluated in soil samples from different cultivated fields in Japan for 4 weeks. Both the degradation speed of the PBSA film and the esterase activity were found to be correlated with the ratio of colonies that produced clear zone on fungal minimum medium-agarose plate with emulsified PBSA to the total number colonies counted. Time-dependent change in viable counts of the PBSA-degrading fungi and esterase activities were monitored in soils where buried films showed the most and the least degree of degradation. During the degradation of PBSA film, the viable counts of the PBSA-degrading fungi and the esterase activities in soils, which adhered to the PBSA film, increased with time. The soil, where the film was degraded the fastest, recorded large PBSA-degrading fungal population and showed high esterase activity compared with the other soil samples throughout the incubation period. Meanwhile, esterase activity and viable counts of PBSA-degrading fungi were found to be stable in soils without PBSA film. These results suggest that the higher the distribution ratio of native PBSA-degrading fungi in the soil, the faster the film degradation is. This could be due to the rapid accumulation of secreted esterases in these soils.Entities:
Keywords: Aliphatic polyester; Biodegradable plastics; Esterase; PBSA
Year: 2015 PMID: 25852987 PMCID: PMC4384995 DOI: 10.1186/s13568-014-0088-x
Source DB: PubMed Journal: AMB Express ISSN: 2191-0855 Impact factor: 3.298
Properties of soils used in this study
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| CHI | alluvial | sandy loam | 7.17 | 1.30 | 0.13 | Chiba |
| TKB | volcanic ash | loam | 6.30 | 6.22 | 0.59 | Ibaraki |
| HIO | alluvial | loam | 7.05 | 2.08 | 0.17 | Kagoshima |
| MJO | volcanic ash | sandy loam | 5.36 | 6.95 | 0.48 | Miyazaki |
| TAK | alluvial | sandy loam | 7.30 | NA* | NA | Miyazaki |
| KIB | alluvial | clay loam | 6.15 | 3.37 | 0.25 | Okayama |
| OKA | alluvial | loam | 7.14 | 4.52 | 0.39 | Okayama |
| AKA | alluvial | loam | 5.78 | 1.39 | 0.10 | Shimane |
| MIY | alluvial | sandy loam | 5.91 | 0.97 | 0.09 | Shimane |
| YM1 | volcanic ash | clay loam | 7.26 | 2.61 | 0.27 | Yamanashi |
| YM2 | alluvial | clay loam | 7.17 | 2.07 | 0.22 | Yamanashi |
*NA: not analyzed.
Figure 1Degradation of the PBSA film buried for 4 weeks in soils from 11 cultivated fields.
Degradation ratios (%) of soil-buried PBSA films
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| CHI | −2.4 ± 2.5 | −0.9 ± 0.9 | 7.4 ± 7.3 | 33.1 ± 9.0 |
| TKB | 1.0 ± 3.5 | −0.7 ± 1.3 | 0.8 ± 1.5 | 1.4 ± 3.4 |
| HIO | −1.7 ± 1.1 | 1.2 ± 1.4 | −0.2 ± 0.2 | 7.3 ± 8.1 |
| MJO | 0.6 ± 1.7 | 0.6 ± 3.0 | 4.0 ± 2.0 | 7.9 ± 1.8 |
| TAK | 1.8 ± 2.5 | 3.3 ± 1.7 | 5.4 ± 3.2 | 30.1 ± 6.6 |
| KIB | −4.0 ± 2.1 | 7.8 ± 5.7 | 34.5 ± 8.3 | 58.9 ± 36.3 |
| OKA | 0.4 ± 2.6 | 3.9 ± 5.8 | 60.3 ± 23.2 | 95.9 ± 6.6 |
| AKA | −4.7 ± 2.5 | 0.5 ± 2.3 | 54.3 ± 22.9 | 66.0 ± 17.3 |
| MIY | 1.2 ± 0.2 | 5.2 ± 3.2 | 28.5 ± 27.7 | 69.7 ± 33.2 |
| YM1 | 2.7 ± 0.9 | 16.9 ± 3.4 | 62.0 ± 14.1 | 48.5 ± 11.6 |
| YM2 | 0.9 ± 1.0 | 21.4 ± 5.0 | 44.1 ± 9.2 | 61.3 ± 8.4 |
*The ratios represent the means ± standard error of triplicate assays.
Degradation ratios were calculated by image scanning method as indicated in the equation given in the Materials and methods section.
Viable counts of the total microorganisms and the PBSA degraders, and the isolation rates
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| CHI | 6.28 × 104 | 1.55 × 104 | 24.7 | 4.37 × 107 | 2.83 × 103 | 0.0 |
| TKB | 6.06 × 104 | 8.47 × 103 | 14.0 | 2.59 × 107 | 2.49 × 104 | 0.1 |
| HIO | 6.41 × 104 | 2.63 × 103 | 4.1 | NA* | NA | NA |
| MJO | 2.10 × 105 | 8.12 × 104 | 38.6 | 3.86 × 107 | 0.0 | 0.0 |
| TAK | 9.48 × 104 | 1.45 × 104 | 15.3 | 1.82 × 108 | 6.13 × 102 | 0.0 |
| KIB | 1.01 × 105 | 2.71 × 104 | 26.8 | NA | NA | NA |
| OKA | 4.08 × 104 | 1.72 × 104 | 42.3 | 5.78 × 107 | 9.66 × 103 | 0.0 |
| AKA | 5.88 × 104 | 8.99 × 103 | 15.3 | NA | NA | NA |
| MIY | 2.88 × 104 | 2.74 × 103 | 9.5 | NA | NA | NA |
| YM1 | 6.09 × 104 | 2.45 × 104 | 40.3 | 2.82 × 107 | 2.95 × 102 | 0.0 |
| YM2 | 5.62 × 104 | 2.88 × 103 | 51.3 | 2.53 × 107 | 4.64 × 103 | 0.0 |
*NA: not analyzed.
Figure 2The isolation rate of the PBSA-degrading fungi and the degradation rate of the PBSA film. The scatter diagram shows the correlation between the isolation rate of the PBSA-degrading fungi and the degradation rate of the PBSA film in different soils. P represents the significance, and ρ represents Spearman's correlation coefficient. Degradation rate (%) is the average degradation during the first 3 weeks (ratio/week).
Figure 3The isolation rate of the PBSA-degrading fungi and the esterase activity. The scatter diagram shows the correlation between the isolation rate of the PBSA-degrading fungi and the esterase activity in different soils. P represents the significance, and ρ represents Spearman's correlation coefficient.
Figure 4Changes in the viable counts of the PBSA-degrading fungi in peripheral soils for 4 weeks. The PBSA film buried in OKA (circles) and TKB (triangles) soil samples. The data shown are geometric means with error bar (1 standard deviation) of triplicate assays. Asterisk represents a significant increase (α = 0.025) in the population of the PBSA-degrading fungi from the 0-day control of each soil sample.
Figure 5Changes in the esterase activities in soil for 4 weeks with or without PBSA. The peripheral soils of the PBSA film: OKA (black circles) and TKB (black triangles); the no treatment soils (without PBSA film) for control: OKA (white circles) and TKB (white triangles). The data represent geometric means with error bar indicating 1 standard error of 6 independent assays. Asterisk and dagger represent a significant increase (α = 0.025) in the esterase activity from the 0-day controls of each soil sample. P values represent significance levels between the esterase activity in the soils with and without PBSA film.