Literature DB >> 25843948

Augmenting MRI-transrectal ultrasound-guided prostate biopsy with temporal ultrasound data: a clinical feasibility study.

Farhad Imani1, Bo Zhuang, Amir Tahmasebi, Jin Tae Kwak, Sheng Xu, Harsh Agarwal, Shyam Bharat, Nishant Uniyal, Ismail Baris Turkbey, Peter Choyke, Peter Pinto, Bradford Wood, Mehdi Moradi, Parvin Mousavi, Purang Abolmaesumi.   

Abstract

PURPOSE: In recent years, fusion of multi-parametric MRI (mp-MRI) with transrectal ultrasound (TRUS)-guided biopsy has enabled targeted prostate biopsy with improved cancer yield. Target identification is solely based on information from mp-MRI, which is subsequently transferred to the subject coordinates through an image registration approach. mp-MRI has shown to be highly sensitive to detect higher-grade prostate cancer, but suffers from a high rate of false positives for lower-grade cancer, leading to unnecessary biopsies. This paper utilizes a machine-learning framework to further improve the sensitivity of targeted biopsy through analyzing temporal ultrasound data backscattered from the prostate tissue.
METHODS: Temporal ultrasound data were acquired during targeted fusion prostate biopsy from suspicious cancer foci identified in mp-MRI. Several spectral features, representing the signature of backscattered signal from the tissue, were extracted from the temporal ultrasound data. A supervised support vector machine classification model was trained to relate the features to the result of histopathology analysis of biopsy cores obtained from cancer foci. The model was used to predict the label of biopsy cores for mp-MRI-identified targets in an independent group of subjects.
RESULTS: Training of the classier was performed on data obtained from 35 biopsy cores. A fivefold cross-validation strategy was utilized to examine the consistency of the selected features from temporal ultrasound data, where we achieved the classification accuracy and area under receiver operating characteristic curve of 94 % and 0.98, respectively. Subsequently, an independent group of 25 biopsy cores was used for validation of the model, in which mp-MRI had identified suspicious cancer foci. Using the trained model, we predicted the tissue pathology using temporal ultrasound data: 16 out of 17 benign cores, as well as all three higher-grade cancer cores, were correctly identified.
CONCLUSION: The results show that temporal analysis of ultrasound data is potentially an effective approach to complement mp-MRI-TRUS-guided prostate cancer biopsy, specially to reduce the number of unnecessary biopsies and to reliably identify higher-grade cancers.

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Year:  2015        PMID: 25843948      PMCID: PMC5612379          DOI: 10.1007/s11548-015-1184-3

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  24 in total

1.  Elastographic imaging.

Authors:  J Ophir; B Garra; F Kallel; E Konofagou; T Krouskop; R Righetti; T Varghese
Journal:  Ultrasound Med Biol       Date:  2000-05       Impact factor: 2.998

2.  Tissue typing using ultrasound RF time series: experiments with animal tissue samples.

Authors:  Mehdi Moradi; Purang Abolmaesumi; Parvin Mousavi
Journal:  Med Phys       Date:  2010-08       Impact factor: 4.071

3.  Closed-loop control in fused MR-TRUS image-guided prostate biopsy.

Authors:  Sheng Xu; Jochen Kruecker; Peter Guion; Neil Glossop; Ziv Neeman; Peter Choyke; Anurag K Singh; Bradford J Wood
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

4.  Multiparametric 3D in vivo ultrasound vibroelastography imaging of prostate cancer: Preliminary results.

Authors:  Mehdi Moradi; S Sara Mahdavi; Guy Nir; Omid Mohareri; Anthony Koupparis; Louis-Olivier Gagnon; Ladan Fazli; Rowan G Casey; Joseph Ischia; Edward C Jones; S Larry Goldenberg; Septimiu E Salcudean
Journal:  Med Phys       Date:  2014-07       Impact factor: 4.071

5.  Tissue classification using ultrasound-induced variations in acoustic backscattering features.

Authors:  Mohammad I Daoud; Parvin Mousavi; Farhad Imani; Robert Rohling; Purang Abolmaesumi
Journal:  IEEE Trans Biomed Eng       Date:  2012-10-24       Impact factor: 4.538

6.  Ultrasound-guided characterization of interstitial ablated tissue using RF time series: feasibility study.

Authors:  Farhad Imani; Purang Abolmaesumi; Mark Z Wu; Andras Lasso; Everett C Burdette; Goutam Ghoshal; Tamas Heffter; Emery Williams; Paul Neubauer; Gabor Fichtinger; Parvin Mousavi
Journal:  IEEE Trans Biomed Eng       Date:  2013-01-15       Impact factor: 4.538

7.  Prostate cancer localization with dynamic contrast-enhanced MR imaging and proton MR spectroscopic imaging.

Authors:  Jurgen J Fütterer; Stijn W T P J Heijmink; Tom W J Scheenen; Jeroen Veltman; Henkjan J Huisman; Pieter Vos; Christina A Hulsbergen-Van de Kaa; J Alfred Witjes; Paul F M Krabbe; Arend Heerschap; Jelle O Barentsz
Journal:  Radiology       Date:  2006-09-11       Impact factor: 11.105

8.  Prostate cancer: value of multiparametric MR imaging at 3 T for detection--histopathologic correlation.

Authors:  Baris Turkbey; Peter A Pinto; Haresh Mani; Marcelino Bernardo; Yuxi Pang; Yolanda L McKinney; Kiranpreet Khurana; Gregory C Ravizzini; Paul S Albert; Maria J Merino; Peter L Choyke
Journal:  Radiology       Date:  2010-04       Impact factor: 11.105

9.  Real-time MRI-TRUS fusion for guidance of targeted prostate biopsies.

Authors:  Sheng Xu; Jochen Kruecker; Baris Turkbey; Neil Glossop; Anurag K Singh; Peter Choyke; Peter Pinto; Bradford J Wood
Journal:  Comput Aided Surg       Date:  2008-09

10.  Ultrasonic multifeature tissue characterization for prostate diagnostics.

Authors:  Ulrich Scheipers; Helmut Ermert; Hans-Joerg Sommerfeld; Miguel Garcia-Schürmann; Theodor Senge; Stathis Philippou
Journal:  Ultrasound Med Biol       Date:  2003-08       Impact factor: 2.998

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  5 in total

1.  Detection and grading of prostate cancer using temporal enhanced ultrasound: combining deep neural networks and tissue mimicking simulations.

Authors:  Shekoofeh Azizi; Sharareh Bayat; Pingkun Yan; Amir Tahmasebi; Guy Nir; Jin Tae Kwak; Sheng Xu; Storey Wilson; Kenneth A Iczkowski; M Scott Lucia; Larry Goldenberg; Septimiu E Salcudean; Peter A Pinto; Bradford Wood; Purang Abolmaesumi; Parvin Mousavi
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-06-20       Impact factor: 2.924

2.  Detection of prostate cancer using temporal sequences of ultrasound data: a large clinical feasibility study.

Authors:  Shekoofeh Azizi; Farhad Imani; Sahar Ghavidel; Amir Tahmasebi; Jin Tae Kwak; Sheng Xu; Baris Turkbey; Peter Choyke; Peter Pinto; Bradford Wood; Parvin Mousavi; Purang Abolmaesumi
Journal:  Int J Comput Assist Radiol Surg       Date:  2016-04-08       Impact factor: 2.924

3.  Transfer learning from RF to B-mode temporal enhanced ultrasound features for prostate cancer detection.

Authors:  Shekoofeh Azizi; Parvin Mousavi; Pingkun Yan; Amir Tahmasebi; Jin Tae Kwak; Sheng Xu; Baris Turkbey; Peter Choyke; Peter Pinto; Bradford Wood; Purang Abolmaesumi
Journal:  Int J Comput Assist Radiol Surg       Date:  2017-03-27       Impact factor: 2.924

4.  Deep neural maps for unsupervised visualization of high-grade cancer in prostate biopsies.

Authors:  Alireza Sedghi; Mehran Pesteie; Golara Javadi; Shekoofeh Azizi; Pingkun Yan; Jin Tae Kwak; Sheng Xu; Baris Turkbey; Peter Choyke; Peter Pinto; Bradford Wood; Robert Rohling; Purang Abolmaesumi; Parvin Mousavi
Journal:  Int J Comput Assist Radiol Surg       Date:  2019-03-23       Impact factor: 2.924

5.  Deep Recurrent Neural Networks for Prostate Cancer Detection: Analysis of Temporal Enhanced Ultrasound.

Authors:  Shekoofeh Azizi; Sharareh Bayat; Pingkun Yan; Amir Tahmasebi; Jin Tae Kwak; Sheng Xu; Baris Turkbey; Peter Choyke; Peter Pinto; Bradford Wood; Parvin Mousavi; Purang Abolmaesumi
Journal:  IEEE Trans Med Imaging       Date:  2018-06-25       Impact factor: 10.048

  5 in total

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