Literature DB >> 28349507

Transfer learning from RF to B-mode temporal enhanced ultrasound features for prostate cancer detection.

Shekoofeh Azizi1, Parvin Mousavi2, Pingkun Yan3, Amir Tahmasebi3, Jin Tae Kwak4, Sheng Xu5, Baris Turkbey5, Peter Choyke5, Peter Pinto5, Bradford Wood5, Purang Abolmaesumi6.   

Abstract

PURPOSE: We present a method for prostate cancer (PCa) detection using temporal enhanced ultrasound (TeUS) data obtained either from radiofrequency (RF) ultrasound signals or B-mode images.
METHODS: For the first time, we demonstrate that by applying domain adaptation and transfer learning methods, a tissue classification model trained on TeUS RF data (source domain) can be deployed for classification using TeUS B-mode data alone (target domain), where both data are obtained on the same ultrasound scanner. This is a critical step for clinical translation of tissue classification techniques that primarily rely on accessing RF data, since this imaging modality is not readily available on all commercial scanners in clinics. Proof of concept is provided for in vivo characterization of PCa using TeUS B-mode data, where different nonlinear processing filters in the pipeline of the RF to B-mode conversion result in a distribution shift between the two domains.
RESULTS: Our in vivo study includes data obtained in MRI-guided targeted procedure for prostate biopsy. We achieve comparable area under the curve using TeUS RF and B-mode data for medium to large cancer tumor sizes in biopsy cores (>4 mm).
CONCLUSION: Our result suggests that the proposed adaptation technique is successful in reducing the divergence between TeUS RF and B-mode data.

Entities:  

Keywords:  B-mode; Cancer diagnosis; Deep belief network; Deep learning; Prostate cancer; Radiofrequency signal; Temporal enhanced ultrasound; Transfer learning

Mesh:

Year:  2017        PMID: 28349507      PMCID: PMC8171585          DOI: 10.1007/s11548-017-1573-x

Source DB:  PubMed          Journal:  Int J Comput Assist Radiol Surg        ISSN: 1861-6410            Impact factor:   2.924


  16 in total

1.  Ultrasound-Based Characterization of Prostate Cancer Using Joint Independent Component Analysis.

Authors:  Farhad Imani; Mahdi Ramezani; Saman Nouranian; Eli Gibson; Amir Khojaste; Mena Gaed; Madeleine Moussa; Jose A Gomez; Cesare Romagnoli; Michael Leveridge; Silvia Chang; Aaron Fenster; D Robert Siemens; Aaron D Ward; Parvin Mousavi; Purang Abolmaesumi
Journal:  IEEE Trans Biomed Eng       Date:  2015-02-16       Impact factor: 4.538

2.  Tissue typing using ultrasound RF time series: experiments with animal tissue samples.

Authors:  Mehdi Moradi; Purang Abolmaesumi; Parvin Mousavi
Journal:  Med Phys       Date:  2010-08       Impact factor: 4.071

Review 3.  Computer-aided diagnosis of prostate cancer with emphasis on ultrasound-based approaches: a review.

Authors:  Mehdi Moradi; Parvin Mousavi; Purang Abolmaesumi
Journal:  Ultrasound Med Biol       Date:  2007-05-07       Impact factor: 2.998

4.  Detection of prostate cancer using temporal sequences of ultrasound data: a large clinical feasibility study.

Authors:  Shekoofeh Azizi; Farhad Imani; Sahar Ghavidel; Amir Tahmasebi; Jin Tae Kwak; Sheng Xu; Baris Turkbey; Peter Choyke; Peter Pinto; Bradford Wood; Parvin Mousavi; Purang Abolmaesumi
Journal:  Int J Comput Assist Radiol Surg       Date:  2016-04-08       Impact factor: 2.924

5.  Transfer learning improves supervised image segmentation across imaging protocols.

Authors:  Annegreet van Opbroek; M Arfan Ikram; Meike W Vernooij; Marleen de Bruijne
Journal:  IEEE Trans Med Imaging       Date:  2014-11-04       Impact factor: 10.048

6.  Multi-Center MRI Carotid Plaque Component Segmentation Using Feature Normalization and Transfer Learning.

Authors:  Arna van Engelen; Anouk C van Dijk; Martine T B Truijman; Ronald Van't Klooster; Annegreet van Opbroek; Aad van der Lugt; Wiro J Niessen; M Eline Kooi; Marleen de Bruijne
Journal:  IEEE Trans Med Imaging       Date:  2014-12-19       Impact factor: 10.048

7.  Tissue classification using ultrasound-induced variations in acoustic backscattering features.

Authors:  Mohammad I Daoud; Parvin Mousavi; Farhad Imani; Robert Rohling; Purang Abolmaesumi
Journal:  IEEE Trans Biomed Eng       Date:  2012-10-24       Impact factor: 4.538

8.  Differentiation and characterization of rat mammary fibroadenomas and 4T1 mouse carcinomas using quantitative ultrasound imaging.

Authors:  Michael L Oelze; William D O'Brien; James P Blue; James F Zachary
Journal:  IEEE Trans Med Imaging       Date:  2004-06       Impact factor: 10.048

9.  Inter-site and inter-scanner diffusion MRI data harmonization.

Authors:  H Mirzaalian; L Ning; P Savadjiev; O Pasternak; S Bouix; O Michailovich; G Grant; C E Marx; R A Morey; L A Flashman; M S George; T W McAllister; N Andaluz; L Shutter; R Coimbra; R D Zafonte; M J Coleman; M Kubicki; C F Westin; M B Stein; M E Shenton; Y Rathi
Journal:  Neuroimage       Date:  2016-04-30       Impact factor: 6.556

10.  Deep Convolutional Neural Networks for Computer-Aided Detection: CNN Architectures, Dataset Characteristics and Transfer Learning.

Authors:  Hoo-Chang Shin; Holger R Roth; Mingchen Gao; Le Lu; Ziyue Xu; Isabella Nogues; Jianhua Yao; Daniel Mollura; Ronald M Summers
Journal:  IEEE Trans Med Imaging       Date:  2016-02-11       Impact factor: 10.048

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1.  Evaluation of data augmentation via synthetic images for improved breast mass detection on mammograms using deep learning.

Authors:  Kenny H Cha; Nicholas Petrick; Aria Pezeshk; Christian G Graff; Diksha Sharma; Andreu Badal; Berkman Sahiner
Journal:  J Med Imaging (Bellingham)       Date:  2019-11-22

Review 2.  Current development and prospects of deep learning in spine image analysis: a literature review.

Authors:  Biao Qu; Jianpeng Cao; Chen Qian; Jinyu Wu; Jianzhong Lin; Liansheng Wang; Lin Ou-Yang; Yongfa Chen; Liyue Yan; Qing Hong; Gaofeng Zheng; Xiaobo Qu
Journal:  Quant Imaging Med Surg       Date:  2022-06

3.  Deep Recurrent Neural Networks for Prostate Cancer Detection: Analysis of Temporal Enhanced Ultrasound.

Authors:  Shekoofeh Azizi; Sharareh Bayat; Pingkun Yan; Amir Tahmasebi; Jin Tae Kwak; Sheng Xu; Baris Turkbey; Peter Choyke; Peter Pinto; Bradford Wood; Parvin Mousavi; Purang Abolmaesumi
Journal:  IEEE Trans Med Imaging       Date:  2018-06-25       Impact factor: 10.048

Review 4.  Current and emerging artificial intelligence applications for pediatric abdominal imaging.

Authors:  Jonathan R Dillman; Elan Somasundaram; Samuel L Brady; Lili He
Journal:  Pediatr Radiol       Date:  2021-04-12

Review 5.  A review on medical imaging synthesis using deep learning and its clinical applications.

Authors:  Tonghe Wang; Yang Lei; Yabo Fu; Jacob F Wynne; Walter J Curran; Tian Liu; Xiaofeng Yang
Journal:  J Appl Clin Med Phys       Date:  2020-12-11       Impact factor: 2.102

Review 6.  Transfer Learning in Breast Cancer Diagnoses via Ultrasound Imaging.

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Journal:  Cancers (Basel)       Date:  2021-02-10       Impact factor: 6.639

7.  Early Prediction of Cognitive Deficit in Very Preterm Infants Using Brain Structural Connectome With Transfer Learning Enhanced Deep Convolutional Neural Networks.

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8.  A multi-task, multi-stage deep transfer learning model for early prediction of neurodevelopment in very preterm infants.

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Journal:  Sci Rep       Date:  2020-09-15       Impact factor: 4.379

9.  Current status of deep learning applications in abdominal ultrasonography.

Authors:  Kyoung Doo Song
Journal:  Ultrasonography       Date:  2020-09-02

10.  Automated Gleason grading of prostate cancer using transfer learning from general-purpose deep-learning networks.

Authors:  Mircea Sebastian Şerbănescu; Nicolae Cătălin Manea; Liliana Streba; Smaranda Belciug; Iancu Emil Pleşea; Ionica Pirici; Raluca Maria Bungărdean; Răzvan Mihail Pleşea
Journal:  Rom J Morphol Embryol       Date:  2020       Impact factor: 1.033

  10 in total

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