Literature DB >> 25795726

Increased expression of neutrophil-related genes in patients with early sepsis-induced ARDS.

Kirsten Neudoerffer Kangelaris1, Arun Prakash2, Kathleen D Liu3, Bradley Aouizerat4, Prescott G Woodruff5, David J Erle6, Angela Rogers7, Eric J Seeley6, Jeffrey Chu2, Tom Liu2, Thomas Osterberg-Deiss2, Hanjing Zhuo2, Michael A Matthay8, Carolyn S Calfee8.   

Abstract

The early sequence of events leading to the development of the acute respiratory distress syndrome (ARDS) in patients with sepsis remains inadequately understood. The purpose of this study was to identify changes in gene expression early in the course of illness, when mechanisms of injury may provide the most relevant treatment and prognostic targets. We collected whole blood RNA in critically ill patients admitted from the Emergency Department to the intensive care unit within 24 h of admission at a tertiary care center. Whole genome expression was compared in patients with sepsis and ARDS to patients with sepsis alone. We selected genes with >1 log2 fold change and false discovery rate <0.25, determined their significance in the literature, and performed pathway analysis. Several genes were upregulated in 29 patients with sepsis with ARDS compared with 28 patients with sepsis alone. The most differentially expressed genes included key mediators of the initial neutrophil response to infection: olfactomedin 4, lipocalin 2, CD24, and bactericidal/permeability-increasing protein. These gene expression differences withstood adjustment for age, sex, study batch, white blood cell count, and presence of pneumonia or aspiration. Pathway analysis demonstrated overrepresentation of genes involved in known respiratory and infection pathways. These data indicate that several neutrophil-related pathways may be involved in the early pathogenesis of sepsis-related ARDS. In addition, identifiable gene expression differences occurring early in the course of sepsis-related ARDS may further elucidate understanding of the neutrophil-related mechanisms in progression to ARDS.
Copyright © 2015 the American Physiological Society.

Entities:  

Keywords:  ARDS; gene expression; neutrophils; sepsis

Mesh:

Substances:

Year:  2015        PMID: 25795726      PMCID: PMC4451399          DOI: 10.1152/ajplung.00380.2014

Source DB:  PubMed          Journal:  Am J Physiol Lung Cell Mol Physiol        ISSN: 1040-0605            Impact factor:   5.464


  67 in total

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Authors:  Erik Willems; Luc Leyns; Jo Vandesompele
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6.  [Protective effects of bactericidal/permeability increasing protein simulated peptide on murine acute lung injury induced by lipopolysaccharide].

Authors:  Hong-fu Gao; Jian-cheng Yuan; Guang-xia Xiao
Journal:  Zhonghua Shao Shang Za Zhi       Date:  2005-04

7.  Neutrophil gelatinase-associated lipocalin at ICU admission predicts for acute kidney injury in adult patients.

Authors:  Hilde R H de Geus; Jan Bakker; Emmanuel M E H Lesaffre; Jos L M L le Noble
Journal:  Am J Respir Crit Care Med       Date:  2010-10-08       Impact factor: 21.405

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Journal:  N Engl J Med       Date:  2005-10-20       Impact factor: 91.245

9.  Plasma angiopoietin-2 predicts the onset of acute lung injury in critically ill patients.

Authors:  Ashish Agrawal; Michael A Matthay; Kirsten N Kangelaris; John Stein; Jeffrey C Chu; Brandon M Imp; Alfredo Cortez; Jason Abbott; Kathleen D Liu; Carolyn S Calfee
Journal:  Am J Respir Crit Care Med       Date:  2013-04-01       Impact factor: 21.405

10.  Genome-level longitudinal expression of signaling pathways and gene networks in pediatric septic shock.

Authors:  Thomas P Shanley; Natalie Cvijanovich; Richard Lin; Geoffrey L Allen; Neal J Thomas; Allan Doctor; Meena Kalyanaraman; Nancy M Tofil; Scott Penfil; Marie Monaco; Kelli Odoms; Michael Barnes; Bhuvaneswari Sakthivel; Bruce J Aronow; Hector R Wong
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  79 in total

1.  Single cell RNA sequencing identifies an early monocyte gene signature in acute respiratory distress syndrome.

Authors:  Yale Jiang; Brian R Rosborough; Jie Chen; Sudipta Das; Georgios D Kitsios; Bryan J McVerry; Rama K Mallampalli; Janet S Lee; Anuradha Ray; Wei Chen; Prabir Ray
Journal:  JCI Insight       Date:  2020-07-09

2.  Olfactomedin-4 Is a Candidate Marker for a Pathogenic Neutrophil Subset in Septic Shock.

Authors:  Matthew N Alder; Amy M Opoka; Patrick Lahni; David A Hildeman; Hector R Wong
Journal:  Crit Care Med       Date:  2017-04       Impact factor: 7.598

3.  Genomic and Genetic Approaches to Deciphering Acute Respiratory Distress Syndrome Risk and Mortality.

Authors:  Heather Lynn; Xiaoguang Sun; Nancy Casanova; Manuel Gonzales-Garay; Christian Bime; Joe G N Garcia
Journal:  Antioxid Redox Signal       Date:  2019-06-18       Impact factor: 8.401

Review 4.  Fifty Years of Research in ARDS. Genomic Contributions and Opportunities.

Authors:  John P Reilly; Jason D Christie; Nuala J Meyer
Journal:  Am J Respir Crit Care Med       Date:  2017-11-01       Impact factor: 21.405

5.  Temporal Changes in Microrna Expression in Blood Leukocytes from Patients with the Acute Respiratory Distress Syndrome.

Authors:  Purushottam Narute; Nitin Seam; Margaret Tropea; Carolea Logun; Rongman Cai; Junfeng Sun; James H Shelhamer; Gianfranco U Meduri; Anthony F Suffredini
Journal:  Shock       Date:  2017-06       Impact factor: 3.454

6.  Peripheral and Alveolar Cell Transcriptional Programs Are Distinct in Acute Respiratory Distress Syndrome.

Authors:  Eric D Morrell; Frank Radella; Anne M Manicone; Carmen Mikacenic; Renee D Stapleton; Sina A Gharib; Mark M Wurfel
Journal:  Am J Respir Crit Care Med       Date:  2018-02-15       Impact factor: 21.405

Review 7.  The Pathogenic Involvement of Neutrophils in Acute Respiratory Distress Syndrome and Transfusion-Related Acute Lung Injury.

Authors:  Johan Rebetz; John W Semple; Rick Kapur
Journal:  Transfus Med Hemother       Date:  2018-09-21       Impact factor: 3.747

Review 8.  Pathophysiology of septic shock: From bench to bedside.

Authors:  Kevin W McConnell; Craig M Coopersmith
Journal:  Presse Med       Date:  2016-04-13       Impact factor: 1.228

9.  Myeloperoxidase-derived 2-chlorofatty acids contribute to human sepsis mortality via acute respiratory distress syndrome.

Authors:  Nuala J Meyer; John P Reilly; Rui Feng; Jason D Christie; Stanley L Hazen; Carolyn J Albert; Jacob D Franke; Celine L Hartman; Jane McHowat; David A Ford
Journal:  JCI Insight       Date:  2017-12-07

10.  Juvenile OLFM4-null mice are protected from sepsis.

Authors:  Julie E Stark; Amy M Opoka; Jaya Mallela; Prasad Devarajan; Qing Ma; Nick C Levinsky; Keith F Stringer; Hector R Wong; Matthew N Alder
Journal:  Am J Physiol Renal Physiol       Date:  2020-02-18
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