Literature DB >> 28481621

Fifty Years of Research in ARDS. Genomic Contributions and Opportunities.

John P Reilly1,2, Jason D Christie1,2,3, Nuala J Meyer1,2.   

Abstract

Clinical factors alone poorly explain acute respiratory distress syndrome (ARDS) risk and ARDS outcome. In the search for individual factors that may influence ARDS risk, the past 20 years have witnessed the identification of numerous genes and genetic variants that are associated with ARDS. The field of ARDS genomics has cycled from candidate gene association studies to bias-free approaches that identify new candidates, and increasing effort is made to understand the functional consequences that may underlie significant associations. More recently, methodologies of causal inference are being applied to maximize the information gained from genetic associations. Although challenges of sample size, both recognized and unrecognized phenotypic heterogeneity, and the paucity of early ARDS lung tissue limit some applications of the rapidly evolving field of genomic investigation, ongoing genetic research offers unique contributions to elucidating ARDS pathogenesis and the paradigm of precision ARDS medicine.

Entities:  

Keywords:  acute respiratory distress syndrome; gene expression; genetic association; genomic

Mesh:

Year:  2017        PMID: 28481621      PMCID: PMC5694838          DOI: 10.1164/rccm.201702-0405CP

Source DB:  PubMed          Journal:  Am J Respir Crit Care Med        ISSN: 1073-449X            Impact factor:   21.405


  95 in total

Review 1.  Fifty Years of Research in ARDS. Insight into Acute Respiratory Distress Syndrome. From Models to Patients.

Authors:  John G Laffey; Brian P Kavanagh
Journal:  Am J Respir Crit Care Med       Date:  2017-07-01       Impact factor: 21.405

2.  T-helper type 2-driven inflammation defines major subphenotypes of asthma.

Authors:  Prescott G Woodruff; Barmak Modrek; David F Choy; Guiquan Jia; Alexander R Abbas; Almut Ellwanger; Laura L Koth; Joseph R Arron; John V Fahy
Journal:  Am J Respir Crit Care Med       Date:  2009-05-29       Impact factor: 21.405

3.  Critical Genomic Networks and Vasoreactive Variants in Idiopathic Pulmonary Arterial Hypertension.

Authors:  Anna R Hemnes; Min Zhao; James West; John H Newman; Stuart Rich; Stephen L Archer; Ivan M Robbins; Timothy S Blackwell; Joy Cogan; James E Loyd; Zhongming Zhao; Christa Gaskill; Christopher Jetter; Jonathan A Kropski; Susan M Majka; Eric D Austin
Journal:  Am J Respir Crit Care Med       Date:  2016-08-15       Impact factor: 21.405

4.  Platelet count mediates the contribution of a genetic variant in LRRC16A to ARDS risk.

Authors:  Yongyue Wei; Zhaoxi Wang; Li Su; Feng Chen; Paula Tejera; Ednan K Bajwa; Mark M Wurfel; Xihong Lin; David C Christiani
Journal:  Chest       Date:  2015-03       Impact factor: 9.410

5.  Acute Respiratory Distress Syndrome Subphenotypes Respond Differently to Randomized Fluid Management Strategy.

Authors:  Katie R Famous; Kevin Delucchi; Lorraine B Ware; Kirsten N Kangelaris; Kathleen D Liu; B Taylor Thompson; Carolyn S Calfee
Journal:  Am J Respir Crit Care Med       Date:  2017-02-01       Impact factor: 21.405

6.  Clinical predictors of the adult respiratory distress syndrome.

Authors:  P E Pepe; R T Potkin; D H Reus; L D Hudson; C J Carrico
Journal:  Am J Surg       Date:  1982-07       Impact factor: 2.565

7.  Genetic variants in the angiopoietin-2 gene are associated with increased risk of ARDS.

Authors:  Li Su; Rihong Zhai; Chau-Chyun Sheu; Diana C Gallagher; Michelle N Gong; Paula Tejera; B Taylor Thompson; David C Christiani
Journal:  Intensive Care Med       Date:  2009-03-07       Impact factor: 17.440

8.  Genome wide association identifies PPFIA1 as a candidate gene for acute lung injury risk following major trauma.

Authors:  Jason D Christie; Mark M Wurfel; Rui Feng; Grant E O'Keefe; Jonathan Bradfield; Lorraine B Ware; David C Christiani; Carolyn S Calfee; Mitchell J Cohen; Michael Matthay; Nuala J Meyer; Cecilia Kim; Mingyao Li; Joshua Akey; Kathleen C Barnes; Jonathan Sevransky; Paul N Lanken; Addison K May; Richard Aplenc; James P Maloney; Hakon Hakonarson
Journal:  PLoS One       Date:  2012-01-25       Impact factor: 3.240

9.  Orthologous gene-expression profiling in multi-species models: search for candidate genes.

Authors:  Dmitry N Grigoryev; Shwu-Fan Ma; Rafael A Irizarry; Shui Qing Ye; John Quackenbush; Joe G N Garcia
Journal:  Genome Biol       Date:  2004-04-27       Impact factor: 13.583

10.  Thrombocytopenia is associated with acute respiratory distress syndrome mortality: an international study.

Authors:  Tiehua Wang; Zhuang Liu; Zhaoxi Wang; Meili Duan; Gang Li; Shupeng Wang; Wenxiong Li; Zhaozhong Zhu; Yongyue Wei; David C Christiani; Ang Li; Xi Zhu
Journal:  PLoS One       Date:  2014-04-14       Impact factor: 3.240

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  23 in total

1.  Single cell RNA sequencing identifies an early monocyte gene signature in acute respiratory distress syndrome.

Authors:  Yale Jiang; Brian R Rosborough; Jie Chen; Sudipta Das; Georgios D Kitsios; Bryan J McVerry; Rama K Mallampalli; Janet S Lee; Anuradha Ray; Wei Chen; Prabir Ray
Journal:  JCI Insight       Date:  2020-07-09

2.  Alternative RNA splicing and alternative transcription start/end in acute respiratory distress syndrome.

Authors:  Alger M Fredericks; Li Juan Wang; William G Fairbrother; Alfred Ayala; Sean F Monaghan
Journal:  Intensive Care Med       Date:  2020-02-20       Impact factor: 17.440

3.  Genomic and Genetic Approaches to Deciphering Acute Respiratory Distress Syndrome Risk and Mortality.

Authors:  Heather Lynn; Xiaoguang Sun; Nancy Casanova; Manuel Gonzales-Garay; Christian Bime; Joe G N Garcia
Journal:  Antioxid Redox Signal       Date:  2019-06-18       Impact factor: 8.401

Review 4.  Acute Respiratory Distress Syndrome Phenotypes.

Authors:  John P Reilly; Carolyn S Calfee; Jason D Christie
Journal:  Semin Respir Crit Care Med       Date:  2019-05-06       Impact factor: 3.119

Review 5.  Redefining critical illness.

Authors:  David M Maslove; Benjamin Tang; Manu Shankar-Hari; Patrick R Lawler; Derek C Angus; J Kenneth Baillie; Rebecca M Baron; Michael Bauer; Timothy G Buchman; Carolyn S Calfee; Claudia C Dos Santos; Evangelos J Giamarellos-Bourboulis; Anthony C Gordon; John A Kellum; Julian C Knight; Aleksandra Leligdowicz; Daniel F McAuley; Anthony S McLean; David K Menon; Nuala J Meyer; Lyle L Moldawer; Kiran Reddy; John P Reilly; James A Russell; Jonathan E Sevransky; Christopher W Seymour; Nathan I Shapiro; Mervyn Singer; Charlotte Summers; Timothy E Sweeney; B Taylor Thompson; Tom van der Poll; Balasubramanian Venkatesh; Keith R Walley; Timothy S Walsh; Lorraine B Ware; Hector R Wong; Zsolt E Zador; John C Marshall
Journal:  Nat Med       Date:  2022-06-17       Impact factor: 87.241

6.  The ABO histo-blood group, endothelial activation, and acute respiratory distress syndrome risk in critical illness.

Authors:  John P Reilly; Nuala J Meyer; Michael Gs Shashaty; Brian J Anderson; Caroline Ittner; Thomas G Dunn; Brian Lim; Caitlin Forker; Michael P Bonk; Ethan Kotloff; Rui Feng; Edward Cantu; Nilam S Mangalmurti; Carolyn S Calfee; Michael A Matthay; Carmen Mikacenic; Keith R Walley; James Russell; David C Christiani; Mark M Wurfel; Paul N Lanken; Muredach P Reilly; Jason D Christie
Journal:  J Clin Invest       Date:  2021-01-04       Impact factor: 14.808

Review 7.  Molecular Mechanisms of Vascular Damage During Lung Injury.

Authors:  Ramon Bossardi Ramos; Alejandro Pablo Adam
Journal:  Adv Exp Med Biol       Date:  2021       Impact factor: 2.622

8.  Receptor for advanced glycation end-products and ARDS prediction: a multicentre observational study.

Authors:  Matthieu Jabaudon; Pauline Berthelin; Thibaut Pranal; Laurence Roszyk; Thomas Godet; Jean-Sébastien Faure; Russell Chabanne; Nathanael Eisenmann; Alexandre Lautrette; Corinne Belville; Raiko Blondonnet; Sophie Cayot; Thierry Gillart; Julien Pascal; Yvan Skrzypczak; Bertrand Souweine; Loic Blanchon; Vincent Sapin; Bruno Pereira; Jean-Michel Constantin
Journal:  Sci Rep       Date:  2018-02-08       Impact factor: 4.379

9.  Nucleotide polymorphism in ARDS outcome: a whole exome sequencing association study.

Authors:  Jing-Yuan Xu; Ai-Ran Liu; Zong-Sheng Wu; Jian-Feng Xie; Xiao-Xiao Qu; Cai-Hua Li; Shan-Shan Meng; Song-Qiao Liu; Cong-Shan Yang; Ling Liu; Ying-Zi Huang; Feng-Mei Guo; Yi Yang; Hai-Bo Qiu
Journal:  Ann Transl Med       Date:  2021-05

Review 10.  Acute respiratory distress syndrome.

Authors:  Nuala J Meyer; Luciano Gattinoni; Carolyn S Calfee
Journal:  Lancet       Date:  2021-07-01       Impact factor: 79.321

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