Literature DB >> 25778715

IFITM3 rs12252 T>C polymorphism is associated with the risk of severe influenza: a meta-analysis.

Y Xuan1, L N Wang1, W Li2, H R Zi1, Y Guo1, W J Yan1, X B Chen1, P M Wei1.   

Abstract

The interferon-inducible transmembrane protein 3 (IFITM3), as one of the key genes involved in the interferon pathway, is critical for defending the host against influenza virus, and the rs12252 T>C variant in IFITM3 might be associated with susceptibility to severe influenza. Owing to contradictory and inconclusive results, we performed a meta-analysis to assess the association between rs12252 T>C polymorphism and severe influenza risk. A comprehensive literature search up to 1 August 2014 was conducted in EMBASE, Pubmed, Web of Science, VIP, Wanfang and CNKI databases. Four eligible studies with a total of 445 influenza patients and 3396 controls were included in this meta-analysis. Overall, our results demonstrated a significant association between the IFITM3 rs12252 T>C polymorphism and influenza risk [C vs. T: odds ratio (OR) 1·68, 95% confidence interval (CI) 1·32-2·13; CC vs. CT+TT: OR 2·38, 95% CI 1·52-3·73; CC+CT vs. TT: OR 1·62, 95% CI 1·18-2·22]. Stratification by ethnicity indicated that the variant C allele was associated with an 88% increased risk of influenza in Asians (C vs. T: OR 1·88, 95% CI 1·34-2·62). Moreover, subjects carrying the variant C allele had an increased risk of developing severe illness upon influenza infection (C vs. T: OR 2·70, 95% CI 1·86-3·94). However, no significant association was observed in patients with mild infection (C vs. T: OR 1·26, 95% CI 0·93-1·71). Our meta-analysis suggests that IFITM3 rs12252 T>C polymorphism is significantly associated with increased risk of severe influenza but not with the chance of initial virus infection.

Entities:  

Keywords:  IFITM3; influenza; meta-analysis; polymorphism

Mesh:

Substances:

Year:  2015        PMID: 25778715      PMCID: PMC9151046          DOI: 10.1017/S0950268815000278

Source DB:  PubMed          Journal:  Epidemiol Infect        ISSN: 0950-2688            Impact factor:   4.434


  24 in total

1.  What is the evidence of a role for host genetics in susceptibility to influenza A/H5N1?

Authors:  P Horby; H Sudoyo; V Viprakasit; A Fox; P Q Thai; H Yu; S Davila; M Hibberd; S J Dunstan; Y Monteerarat; J J Farrar; S Marzuki; N T Hien
Journal:  Epidemiol Infect       Date:  2010-03-18       Impact factor: 2.451

2.  Bias in meta-analysis detected by a simple, graphical test.

Authors:  M Egger; G Davey Smith; M Schneider; C Minder
Journal:  BMJ       Date:  1997-09-13

3.  The N-terminal region of IFITM3 modulates its antiviral activity by regulating IFITM3 cellular localization.

Authors:  Rui Jia; Qinghua Pan; Shilei Ding; Liwei Rong; Shan-Lu Liu; Yunqi Geng; Wentao Qiao; Chen Liang
Journal:  J Virol       Date:  2012-10-10       Impact factor: 5.103

4.  Clinical findings in 111 cases of influenza A (H7N9) virus infection.

Authors:  Hai-Nv Gao; Hong-Zhou Lu; Bin Cao; Bin Du; Hong Shang; Jian-He Gan; Shui-Hua Lu; Yi-Da Yang; Qiang Fang; Yin-Zhong Shen; Xiu-Ming Xi; Qin Gu; Xian-Mei Zhou; Hong-Ping Qu; Zheng Yan; Fang-Ming Li; Wei Zhao; Zhan-Cheng Gao; Guang-Fa Wang; Ling-Xiang Ruan; Wei-Hong Wang; Jun Ye; Hui-Fang Cao; Xing-Wang Li; Wen-Hong Zhang; Xu-Chen Fang; Jian He; Wei-Feng Liang; Juan Xie; Mei Zeng; Xian-Zheng Wu; Jun Li; Qi Xia; Zhao-Chen Jin; Qi Chen; Chao Tang; Zhi-Yong Zhang; Bao-Min Hou; Zhi-Xian Feng; Ji-Fang Sheng; Nan-Shan Zhong; Lan-Juan Li
Journal:  N Engl J Med       Date:  2013-05-22       Impact factor: 91.245

Review 5.  An updated systematic review of the role of host genetics in susceptibility to influenza.

Authors:  Peter Horby; Nhu Y Nguyen; Sarah J Dunstan; John Kenneth Baillie
Journal:  Influenza Other Respir Viruses       Date:  2013-09       Impact factor: 4.380

6.  Detecting influenza epidemics using search engine query data.

Authors:  Jeremy Ginsberg; Matthew H Mohebbi; Rajan S Patel; Lynnette Brammer; Mark S Smolinski; Larry Brilliant
Journal:  Nature       Date:  2009-02-19       Impact factor: 49.962

7.  Preferred reporting items for systematic reviews and meta-analyses: the PRISMA statement.

Authors:  David Moher; Alessandro Liberati; Jennifer Tetzlaff; Douglas G Altman
Journal:  BMJ       Date:  2009-07-21

8.  The IFITM proteins mediate cellular resistance to influenza A H1N1 virus, West Nile virus, and dengue virus.

Authors:  Abraham L Brass; I-Chueh Huang; Yair Benita; Sinu P John; Manoj N Krishnan; Eric M Feeley; Bethany J Ryan; Jessica L Weyer; Louise van der Weyden; Erol Fikrig; David J Adams; Ramnik J Xavier; Michael Farzan; Stephen J Elledge
Journal:  Cell       Date:  2009-12-24       Impact factor: 41.582

9.  Adaptation of novel H7N9 influenza A virus to human receptors.

Authors:  J C F M Dortmans; J Dekkers; I N Ambepitiya Wickramasinghe; M H Verheije; P J M Rottier; F J M van Kuppeveld; E de Vries; C A M de Haan
Journal:  Sci Rep       Date:  2013-10-28       Impact factor: 4.379

10.  Kawasaki disease patients homozygous for the rs12252-C variant of interferon-induced transmembrane protein-3 are significantly more likely to develop coronary artery lesions.

Authors:  Neil E Bowles; Cammon B Arrington; Keiichi Hirono; Tsuneyuki Nakamura; Long Ngo; Yin Shen Wee; Fukiko Ichida; John H Weis
Journal:  Mol Genet Genomic Med       Date:  2014-05-14       Impact factor: 2.183

View more
  20 in total

1.  IFITM3 requires an amphipathic helix for antiviral activity.

Authors:  Nicholas M Chesarino; Alex A Compton; Temet M McMichael; Adam D Kenney; Lizhi Zhang; Victoria Soewarna; Matthew Davis; Olivier Schwartz; Jacob S Yount
Journal:  EMBO Rep       Date:  2017-08-23       Impact factor: 8.807

Review 2.  Influenza Pathogenesis: The Effect of Host Factors on Severity of Disease.

Authors:  Anshu P Gounder; Adrianus C M Boon
Journal:  J Immunol       Date:  2019-01-15       Impact factor: 5.422

Review 3.  Clinical and Genetic Characteristics of Coronaviruses with Particular Emphasis on SARS-CoV-2 Virus.

Authors:  Joanna Iwanicka; Tomasz Iwanicki; Marcin Kaczmarczyk; Włodzimierz Mazur
Journal:  Pol J Microbiol       Date:  2022-06-19

4.  The palmitoyltransferase ZDHHC20 enhances interferon-induced transmembrane protein 3 (IFITM3) palmitoylation and antiviral activity.

Authors:  Temet M McMichael; Lizhi Zhang; Mahesh Chemudupati; Jocelyn C Hach; Adam D Kenney; Howard C Hang; Jacob S Yount
Journal:  J Biol Chem       Date:  2017-10-27       Impact factor: 5.157

5.  IFITMs from Mycobacteria Confer Resistance to Influenza Virus When Expressed in Human Cells.

Authors:  William J Melvin; Temet M McMichael; Nicholas M Chesarino; Jocelyn C Hach; Jacob S Yount
Journal:  Viruses       Date:  2015-06-12       Impact factor: 5.048

Review 6.  Modeling Influenza Virus Infection: A Roadmap for Influenza Research.

Authors:  Alessandro Boianelli; Van Kinh Nguyen; Thomas Ebensen; Kai Schulze; Esther Wilk; Niharika Sharma; Sabine Stegemann-Koniszewski; Dunja Bruder; Franklin R Toapanta; Carlos A Guzmán; Michael Meyer-Hermann; Esteban A Hernandez-Vargas
Journal:  Viruses       Date:  2015-10-12       Impact factor: 5.048

7.  Natural mutations in IFITM3 modulate post-translational regulation and toggle antiviral specificity.

Authors:  Alex A Compton; Nicolas Roy; Françoise Porrot; Anne Billet; Nicoletta Casartelli; Jacob S Yount; Chen Liang; Olivier Schwartz
Journal:  EMBO Rep       Date:  2016-09-06       Impact factor: 8.807

Review 8.  Inhibiting the Ins and Outs of HIV Replication: Cell-Intrinsic Antiretroviral Restrictions at the Plasma Membrane.

Authors:  Toshana L Foster; Suzanne Pickering; Stuart J D Neil
Journal:  Front Immunol       Date:  2018-01-04       Impact factor: 7.561

9.  Rhesus macaque IFITM3 gene polymorphisms and SIV infection.

Authors:  Michael Winkler; Sabine Gärtner; Florian Wrensch; Michael Krawczak; Ulrike Sauermann; Stefan Pöhlmann
Journal:  PLoS One       Date:  2017-03-03       Impact factor: 3.240

10.  E3 Ubiquitin Ligase NEDD4 Promotes Influenza Virus Infection by Decreasing Levels of the Antiviral Protein IFITM3.

Authors:  Nicholas M Chesarino; Temet M McMichael; Jacob S Yount
Journal:  PLoS Pathog       Date:  2015-08-11       Impact factor: 6.823

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.