Literature DB >> 25775607

Dysfunctional conformational dynamics of protein kinase A induced by a lethal mutant of phospholamban hinder phosphorylation.

Jonggul Kim1, Larry R Masterson2, Alessandro Cembran3, Raffaello Verardi2, Lei Shi1, Jiali Gao4, Susan S Taylor5, Gianluigi Veglia6.   

Abstract

The dynamic interplay between kinases and substrates is crucial for the formation of catalytically committed complexes that enable phosphoryl transfer. However, a clear understanding on how substrates modulate kinase structural dynamics to control catalytic efficiency is still missing. Here, we used solution NMR spectroscopy to study the conformational dynamics of two complexes of the catalytic subunit of the cAMP-dependent protein kinase A with WT and R14 deletion phospholamban, a lethal human mutant linked to familial dilated cardiomyopathy. Phospholamban is a central regulator of heart muscle contractility, and its phosphorylation by protein kinase A constitutes a primary response to β-adrenergic stimulation. We found that the single deletion of arginine in phospholamban's recognition sequence for the kinase reduces its binding affinity and dramatically reduces phosphorylation kinetics. Structurally, the mutant prevents the enzyme from adopting conformations and motions committed for catalysis, with concomitant reduction in catalytic efficiency. Overall, these results underscore the importance of a well-tuned structural and dynamic interplay between the kinase and its substrates to achieve physiological phosphorylation levels for proper Ca(2+) signaling and normal cardiac function.

Entities:  

Keywords:  NMR; calcium regulation; conformational dynamics; phospholamban; phosphorylation

Mesh:

Substances:

Year:  2015        PMID: 25775607      PMCID: PMC4378435          DOI: 10.1073/pnas.1502299112

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  54 in total

Review 1.  Phospholamban and cardiac contractile function.

Authors:  A G Brittsan; E G Kranias
Journal:  J Mol Cell Cardiol       Date:  2000-12       Impact factor: 5.000

Review 2.  Dynamics of cAMP-dependent protein kinase.

Authors:  D A Johnson; P Akamine; E Radzio-Andzelm; M Madhusudan; S S Taylor
Journal:  Chem Rev       Date:  2001-08       Impact factor: 60.622

Review 3.  Nmr probes of molecular dynamics: overview and comparison with other techniques.

Authors:  A G Palmer
Journal:  Annu Rev Biophys Biomol Struct       Date:  2001

4.  Allosteric inhibition through suppression of transient conformational states.

Authors:  Shiou-Ru Tzeng; Charalampos G Kalodimos
Journal:  Nat Chem Biol       Date:  2013-05-05       Impact factor: 15.040

5.  Effects of naturally occurring arginine 14 deletion on phospholamban conformational dynamics and membrane interactions.

Authors:  Vitaly V Vostrikov; Kailey J Soller; Kim N Ha; T Gopinath; Gianluigi Veglia
Journal:  Biochim Biophys Acta       Date:  2014-09-22

6.  NMR mapping of protein conformational landscapes using coordinated behavior of chemical shifts upon ligand binding.

Authors:  Alessandro Cembran; Jonggul Kim; Jiali Gao; Gianluigi Veglia
Journal:  Phys Chem Chem Phys       Date:  2014-03-07       Impact factor: 3.676

7.  Connecting protein conformational dynamics with catalytic function as illustrated in dihydrofolate reductase.

Authors:  Yao Fan; Alessandro Cembran; Shuhua Ma; Jiali Gao
Journal:  Biochemistry       Date:  2013-01-16       Impact factor: 3.162

Review 8.  Ca2+ signalling and muscle disease.

Authors:  D H MacLennan
Journal:  Eur J Biochem       Date:  2000-09

9.  Conformational motions regulate phosphoryl transfer in related protein tyrosine phosphatases.

Authors:  Sean K Whittier; Alvan C Hengge; J Patrick Loria
Journal:  Science       Date:  2013-08-23       Impact factor: 47.728

10.  Comparison of the structure and function of phospholamban and the arginine-14 deficient mutant associated with dilated cardiomyopathy.

Authors:  Eleri Hughes; David A Middleton
Journal:  PLoS One       Date:  2014-09-16       Impact factor: 3.240

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  17 in total

Review 1.  Dynamics-Driven Allostery in Protein Kinases.

Authors:  Alexandr P Kornev; Susan S Taylor
Journal:  Trends Biochem Sci       Date:  2015-10-21       Impact factor: 13.807

2.  Binding mechanism and dynamic conformational change of C subunit of PKA with different pathways.

Authors:  Wen-Ting Chu; Xiakun Chu; Jin Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-30       Impact factor: 11.205

3.  Mechanism of cAMP Partial Agonism in Protein Kinase G (PKG).

Authors:  Bryan VanSchouwen; Rajeevan Selvaratnam; Rajanish Giri; Robin Lorenz; Friedrich W Herberg; Choel Kim; Giuseppe Melacini
Journal:  J Biol Chem       Date:  2015-09-14       Impact factor: 5.157

4.  Supramolecular Organization of Apolipoprotein-A-I-Derived Peptides within Disc-like Arrangements.

Authors:  Evgeniy S Salnikov; G M Anantharamaiah; Burkhard Bechinger
Journal:  Biophys J       Date:  2018-07-11       Impact factor: 4.033

5.  Free energy landscape remodeling of the cardiac pacemaker channel explains the molecular basis of familial sinus bradycardia.

Authors:  Stephen Boulton; Madoka Akimoto; Sam Akbarizadeh; Giuseppe Melacini
Journal:  J Biol Chem       Date:  2017-02-07       Impact factor: 5.157

6.  Altering the allosteric pathway in IGPS suppresses millisecond motions and catalytic activity.

Authors:  George P Lisi; Kyle W East; Victor S Batista; J Patrick Loria
Journal:  Proc Natl Acad Sci U S A       Date:  2017-04-10       Impact factor: 11.205

7.  A PKA inhibitor motif within SMOOTHENED controls Hedgehog signal transduction.

Authors:  John T Happ; Corvin D Arveseth; Jessica Bruystens; Daniela Bertinetti; Isaac B Nelson; Cristina Olivieri; Jingyi Zhang; Danielle S Hedeen; Ju-Fen Zhu; Jacob L Capener; Jan W Bröckel; Lily Vu; C C King; Victor L Ruiz-Perez; Xuecai Ge; Gianluigi Veglia; Friedrich W Herberg; Susan S Taylor; Benjamin R Myers
Journal:  Nat Struct Mol Biol       Date:  2022-10-06       Impact factor: 18.361

8.  Uncoupling Catalytic and Binding Functions in the Cyclic AMP-Dependent Protein Kinase A.

Authors:  Jonggul Kim; Geoffrey Li; Michael A Walters; Susan S Taylor; Gianluigi Veglia
Journal:  Structure       Date:  2016-01-28       Impact factor: 5.006

9.  Mapping the Hydrogen Bond Networks in the Catalytic Subunit of Protein Kinase A Using H/D Fractionation Factors.

Authors:  Geoffrey C Li; Atul K Srivastava; Jonggul Kim; Susan S Taylor; Gianluigi Veglia
Journal:  Biochemistry       Date:  2015-06-26       Impact factor: 3.162

10.  Molecular noise filtering in the β-adrenergic signaling network by phospholamban pentamers.

Authors:  Daniel Koch; Alexander Alexandrovich; Florian Funk; Ay Lin Kho; Joachim P Schmitt; Mathias Gautel
Journal:  Cell Rep       Date:  2021-07-27       Impact factor: 9.995

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