Literature DB >> 11340055

Nmr probes of molecular dynamics: overview and comparison with other techniques.

A G Palmer 1.   

Abstract

NMR spin relaxation spectroscopy is a powerful approach for characterizing intramolecular and overall rotational motions in proteins. This review describes experimental methods for measuring laboratory frame spin relaxation rate constants by high-resolution solution-state NMR spectroscopy, together with theoretical approaches for interpreting spin relaxation data in order to quantify protein conformational dynamics on picosecond-nanosecond time scales. Recent applications of these techniques to proteins are surveyed, and investigations of the contribution of conformational chain entropy to protein function are highlighted. Insights into the dynamical properties of proteins obtained from NMR spin relaxation spectroscopy are compared with results derived from other experimental and theoretical techniques.

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Year:  2001        PMID: 11340055     DOI: 10.1146/annurev.biophys.30.1.129

Source DB:  PubMed          Journal:  Annu Rev Biophys Biomol Struct        ISSN: 1056-8700


  117 in total

1.  Enzymology. A moving story.

Authors:  Joseph J Falke
Journal:  Science       Date:  2002-02-22       Impact factor: 47.728

2.  Effects of cavity-forming mutations on the internal dynamics of azurin.

Authors:  Patrizia Cioni; Ellen de Waal; Gerard W Canters; Giovanni B Strambini
Journal:  Biophys J       Date:  2004-02       Impact factor: 4.033

3.  Model-free analysis of protein dynamics: assessment of accuracy and model selection protocols based on molecular dynamics simulation.

Authors:  Jianhan Chen; Charles L Brooks; Peter E Wright
Journal:  J Biomol NMR       Date:  2004-07       Impact factor: 2.835

4.  Modeling the backbone dynamics of reduced and oxidized solvated rat microsomal cytochrome b5.

Authors:  Andrea Giachetti; Giovanni La La Penna; Angelo Perico; Lucia Banci
Journal:  Biophys J       Date:  2004-07       Impact factor: 4.033

5.  Escherichia coli adenylate kinase dynamics: comparison of elastic network model modes with mode-coupling (15)N-NMR relaxation data.

Authors:  N Alpay Temiz; Eva Meirovitch; Ivet Bahar
Journal:  Proteins       Date:  2004-11-15

6.  Applications of NMR spin relaxation methods for measuring biological motions.

Authors:  Guruvasuthevan R Thuduppathy; R Blake Hill
Journal:  Methods Enzymol       Date:  2004       Impact factor: 1.600

7.  Recoupling of chemical shift anisotropy by R-symmetry sequences in magic angle spinning NMR spectroscopy.

Authors:  Guangjin Hou; In-Ja L Byeon; Jinwoo Ahn; Angela M Gronenborn; Tatyana Polenova
Journal:  J Chem Phys       Date:  2012-10-07       Impact factor: 3.488

Review 8.  NMR-based investigations into target DNA search processes of proteins.

Authors:  Junji Iwahara; Levani Zandarashvili; Catherine A Kemme; Alexandre Esadze
Journal:  Methods       Date:  2018-05-10       Impact factor: 3.608

9.  15N relaxation study of the cold shock protein CspB at various solvent viscosities.

Authors:  Markus Zeeb; Maik H Jacob; Thomas Schindler; Jochen Balbach
Journal:  J Biomol NMR       Date:  2003-11       Impact factor: 2.835

10.  Measurement of methyl 13C-1H cross-correlation in uniformly 13C-, 15N-, labeled proteins.

Authors:  Weidong Liu; Yu Zheng; David P Cistola; Daiwen Yang
Journal:  J Biomol NMR       Date:  2003-12       Impact factor: 2.835

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