Literature DB >> 25773597

A diffraction-quality protein crystal processed as an autophagic cargo.

Hidekazu Tsutsui1, Yuka Jinno2, Keiko Shoda3, Akiko Tomita2, Makoto Matsuda4, Eiki Yamashita4, Hiroyuki Katayama3, Atsushi Nakagawa4, Atsushi Miyawaki5.   

Abstract

Crystallization of proteins may occur in the cytosol of a living cell, but how a cell responds to intracellular protein crystallization remains unknown. We developed a variant of coral fluorescent protein that forms diffraction-quality crystals within mammalian cells. This expression system allowed the direct determination of its crystal structure at 2.9 Å, as well as observation of the crystallization process and cellular responses. The micron-sized crystal, which emerged rapidly, was a pure assembly of properly folded β-barrels and was recognized as an autophagic cargo that was transferred to lysosomes via a process involving p62 and LC3. Several lines of evidence indicated that autophagy was not required for crystal nucleation or growth. These findings demonstrate that in vivo protein crystals can provide an experimental model to study chemical catalysis. This knowledge may be beneficial for structural biology studies on normal and disease-related protein aggregation.
Copyright © 2015 Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 25773597     DOI: 10.1016/j.molcel.2015.02.007

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  13 in total

Review 1.  In vivo protein crystallization in combination with highly brilliant radiation sources offers novel opportunities for the structural analysis of post-translationally modified eukaryotic proteins.

Authors:  Michael Duszenko; Lars Redecke; Celestin Nzanzu Mudogo; Benjamin Philip Sommer; Stefan Mogk; Dominik Oberthuer; Christian Betzel
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2015-07-29       Impact factor: 1.056

2.  Engineering a Genetically Encoded Magnetic Protein Crystal.

Authors:  Thomas L Li; Zegao Wang; He You; Qunxiang Ong; Vamsi J Varanasi; Mingdong Dong; Bai Lu; Sergiu P Paşca; Bianxiao Cui
Journal:  Nano Lett       Date:  2019-09-25       Impact factor: 11.189

Review 3.  Harnessing biomolecular condensates in living cells.

Authors:  Hideki Nakamura; Robert DeRose; Takanari Inoue
Journal:  J Biochem       Date:  2019-07-01       Impact factor: 3.387

4.  Microcrystallography of Protein Crystals and In Cellulo Diffraction.

Authors:  Marion Boudes; Damià Garriga; Fasséli Coulibaly
Journal:  J Vis Exp       Date:  2017-07-21       Impact factor: 1.355

5.  Non-invasive and high-throughput interrogation of exon-specific isoform expression.

Authors:  Dong-Jiunn Jeffery Truong; Teeradon Phlairaharn; Bianca Eßwein; Christoph Gruber; Deniz Tümen; Enikő Baligács; Niklas Armbrust; Francesco Leandro Vaccaro; Eva-Maria Lederer; Eva Magdalena Beck; Julian Geilenkeuser; Simone Göppert; Luisa Krumwiede; Christian Grätz; Gerald Raffl; Dominic Schwarz; Martin Zirngibl; Milica Živanić; Maren Beyer; Johann Dietmar Körner; Tobias Santl; Valentin Evsyukov; Tabea Strauß; Sigrid C Schwarz; Günter U Höglinger; Peter Heutink; Sebastian Doll; Marcus Conrad; Florian Giesert; Wolfgang Wurst; Gil Gregor Westmeyer
Journal:  Nat Cell Biol       Date:  2021-06-03       Impact factor: 28.824

6.  A pipeline for structure determination of in vivo-grown crystals using in cellulo diffraction.

Authors:  Marion Boudes; Damià Garriga; Andrew Fryga; Tom Caradoc-Davies; Fasséli Coulibaly
Journal:  Acta Crystallogr D Struct Biol       Date:  2016-03-30       Impact factor: 7.652

7.  Functioning of Fluorescent Proteins in Aggregates in Anthozoa Species and in Recombinant Artificial Models.

Authors:  Natalia V Povarova; Natalia D Petri; Anna E Blokhina; Alexey M Bogdanov; Nadya G Gurskaya; Konstantin A Lukyanov
Journal:  Int J Mol Sci       Date:  2017-07-12       Impact factor: 5.923

8.  Giant crystals inside mitochondria of equine chondrocytes.

Authors:  S Nürnberger; C Rentenberger; K Thiel; B Schädl; I Grunwald; I Ponomarev; St Marlovits; Ch Meyer; D Barnewitz
Journal:  Histochem Cell Biol       Date:  2016-12-24       Impact factor: 4.304

9.  Fixed-target serial femtosecond crystallography using in cellulo grown microcrystals.

Authors:  J Mia Lahey-Rudolph; Robert Schönherr; Miriam Barthelmess; Pontus Fischer; Carolin Seuring; Armin Wagner; Alke Meents; Lars Redecke
Journal:  IUCrJ       Date:  2021-06-18       Impact factor: 4.769

10.  An in cellulo-derived structure of PAK4 in complex with its inhibitor Inka1.

Authors:  Yohendran Baskaran; Khay C Ang; Praju V Anekal; Wee L Chan; Jonathan M Grimes; Ed Manser; Robert C Robinson
Journal:  Nat Commun       Date:  2015-11-26       Impact factor: 14.919

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