Literature DB >> 25773204

The Caulobacter crescentus transducing phage Cr30 is a unique member of the T4-like family of myophages.

Bert Ely1, Whitney Gibbs, Simon Diez, Kurt Ash.   

Abstract

Bacteriophage Cr30 has proven useful for the transduction of Caulobacter crescentus. Nucleotide sequencing of Cr30 DNA revealed that the Cr30 genome consists of 155,997 bp of DNA that codes for 287 proteins and five tRNAs. In contrast to the 67 % GC content of the host genome, the GC content of the Cr30 genome is only 38 %. This lower GC content causes both the codon usage pattern and the amino acid composition of the Cr30 proteins to be quite different from those of the host bacteria. As a consequence, the Cr30 mRNAs probably are translated at a rate that is slower than the normal rate for host mRNAs. A phylogenetic comparison of the genome indicates that Cr30 is a member of the T4-like family that is most closely related to a new group of T-like phages exemplified by фM12.

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Year:  2015        PMID: 25773204      PMCID: PMC4418941          DOI: 10.1007/s00284-015-0799-5

Source DB:  PubMed          Journal:  Curr Microbiol        ISSN: 0343-8651            Impact factor:   2.188


  27 in total

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Authors:  Nicholas H Mann; Martha R J Clokie; Andrew Millard; Annabel Cook; William H Wilson; Peter J Wheatley; Andrey Letarov; H M Krisch
Journal:  J Bacteriol       Date:  2005-05       Impact factor: 3.490

2.  Genomic and structural analysis of Syn9, a cyanophage infecting marine Prochlorococcus and Synechococcus.

Authors:  Peter R Weigele; Welkin H Pope; Marisa L Pedulla; Jennifer M Houtz; Alexis L Smith; James F Conway; Jonathan King; Graham F Hatfull; Jeffrey G Lawrence; Roger W Hendrix
Journal:  Environ Microbiol       Date:  2007-07       Impact factor: 5.491

3.  Development of phoH as a novel signature gene for assessing marine phage diversity.

Authors:  Dawn B Goldsmith; Giuseppe Crosti; Bhakti Dwivedi; Lauren D McDaniel; Arvind Varsani; Curtis A Suttle; Markus G Weinbauer; Ruth-Anne Sandaa; Mya Breitbart
Journal:  Appl Environ Microbiol       Date:  2011-09-16       Impact factor: 4.792

4.  The genome, proteome and phylogenetic analysis of Sinorhizobium meliloti phage ΦM12, the founder of a new group of T4-superfamily phages.

Authors:  Tess E Brewer; M Elizabeth Stroupe; Kathryn M Jones
Journal:  Virology       Date:  2013-12-25       Impact factor: 3.616

Review 5.  Bacteriophage T4 genome.

Authors:  Eric S Miller; Elizabeth Kutter; Gisela Mosig; Fumio Arisaka; Takashi Kunisawa; Wolfgang Rüger
Journal:  Microbiol Mol Biol Rev       Date:  2003-03       Impact factor: 11.056

6.  Alternative mechanism for bacteriophage adsorption to the motile bacterium Caulobacter crescentus.

Authors:  Ricardo C Guerrero-Ferreira; Patrick H Viollier; Bert Ely; Jeanne S Poindexter; Maria Georgieva; Grant J Jensen; Elizabeth R Wright
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-25       Impact factor: 11.205

7.  MICheck: a web tool for fast checking of syntactic annotations of bacterial genomes.

Authors:  Stéphane Cruveiller; Jérôme Le Saux; David Vallenet; Aurélie Lajus; Stéphanie Bocs; Claudine Médigue
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

8.  Genetic diversity among five T4-like bacteriophages.

Authors:  James M Nolan; Vasiliy Petrov; Claire Bertrand; Henry M Krisch; Jim D Karam
Journal:  Virol J       Date:  2006-05-23       Impact factor: 4.099

9.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

10.  Genome landscapes and bacteriophage codon usage.

Authors:  Julius B Lucks; David R Nelson; Grzegorz R Kudla; Joshua B Plotkin
Journal:  PLoS Comput Biol       Date:  2008-02-29       Impact factor: 4.475

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  6 in total

1.  A Genome Comparison of T7-like Podoviruses That Infect Caulobacter crescentus.

Authors:  Doreen Nguyen; Bert Ely
Journal:  Curr Microbiol       Date:  2018-02-08       Impact factor: 2.188

2.  The Isolation and Characterization of Kronos, a Novel Caulobacter Rhizosphere Phage that is Similar to Lambdoid Phages.

Authors:  Louis Berrios; Bert Ely
Journal:  Curr Microbiol       Date:  2019-02-27       Impact factor: 2.188

3.  Cell cycle progression in Caulobacter requires a nucleoid-associated protein with high AT sequence recognition.

Authors:  Dante P Ricci; Michael D Melfi; Keren Lasker; David L Dill; Harley H McAdams; Lucy Shapiro
Journal:  Proc Natl Acad Sci U S A       Date:  2016-09-19       Impact factor: 11.205

4.  Replication fork passage drives asymmetric dynamics of a critical nucleoid-associated protein in Caulobacter.

Authors:  Rodrigo Arias-Cartin; Genevieve S Dobihal; Manuel Campos; Ivan V Surovtsev; Bradley Parry; Christine Jacobs-Wagner
Journal:  EMBO J       Date:  2016-12-23       Impact factor: 11.598

5.  Genomic Diversity of Type B3 Bacteriophages of Caulobacter crescentus.

Authors:  Kurt T Ash; Kristina M Drake; Whitney S Gibbs; Bert Ely
Journal:  Curr Microbiol       Date:  2017-04-10       Impact factor: 2.188

6.  Sinorhizobium meliloti Phage ΦM9 Defines a New Group of T4 Superfamily Phages with Unusual Genomic Features but a Common T=16 Capsid.

Authors:  Matthew C Johnson; Kelsey B Tatum; Jason S Lynn; Tess E Brewer; Stephen Lu; Brian K Washburn; M Elizabeth Stroupe; Kathryn M Jones
Journal:  J Virol       Date:  2015-08-26       Impact factor: 5.103

  6 in total

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