Literature DB >> 25771540

Interdomain hydrophobic interactions modulate the thermostability of microbial esterases from the hormone-sensitive lipase family.

Ping-Yi Li1, Xiu-Lan Chen1, Peng Ji1, Chun-Yang Li1, Peng Wang1, Yi Zhang1, Bin-Bin Xie1, Qi-Long Qin1, Hai-Nan Su1, Bai-Cheng Zhou1, Yu-Zhong Zhang1, Xi-Ying Zhang2.   

Abstract

Microbial hormone-sensitive lipases (HSLs) contain a CAP domain and a catalytic domain. However, it remains unclear how the CAP domain interacts with the catalytic domain to maintain the stability of microbial HSLs. Here, we isolated an HSL esterase, E40, from a marine sedimental metagenomic library. E40 exhibited the maximal activity at 45 °C and was quite thermolabile, with a half-life of only 2 min at 40 °C, which may be an adaptation of E40 to the permanently cold sediment environment. The structure of E40 was solved to study its thermolability. Structural analysis showed that E40 lacks the interdomain hydrophobic interactions between loop 1 of the CAP domain and α7 of the catalytic domain compared with its thermostable homologs. Mutational analysis showed that the introduction of hydrophobic residues Trp(202) and Phe(203) in α7 significantly improved E40 stability and that a further introduction of hydrophobic residues in loop 1 made E40 more thermostable because of the formation of interdomain hydrophobic interactions. Altogether, the results indicate that the absence of interdomain hydrophobic interactions between loop 1 and α7 leads to the thermolability of E40. In addition, a comparative analysis of the structures of E40 and other thermolabile and thermostable HSLs suggests that the interdomain hydrophobic interactions between loop 1 and α7 are a key element for the thermostability of microbial HSLs. Therefore, this study not only illustrates the structural element leading to the thermolability of E40 but also reveals a structural determinant for HSL thermostability.
© 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Crystal Structure; Domain-Domain Interactions; Enzyme Mechanism; HSL Esterases; Hydrophobic Interactions; Protein Domain; Protein Stability; Serine Esterase

Mesh:

Substances:

Year:  2015        PMID: 25771540      PMCID: PMC4409275          DOI: 10.1074/jbc.M115.646182

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  37 in total

1.  A novel thermostable esterase from the thermoacidophilic archaeon Sulfolobus tokodaii strain 7.

Authors:  Yoichi Suzuki; Kenji Miyamoto; Hiromichi Ohta
Journal:  FEMS Microbiol Lett       Date:  2004-07-01       Impact factor: 2.742

2.  SignalP 4.0: discriminating signal peptides from transmembrane regions.

Authors:  Thomas Nordahl Petersen; Søren Brunak; Gunnar von Heijne; Henrik Nielsen
Journal:  Nat Methods       Date:  2011-09-29       Impact factor: 28.547

3.  Structural and functional analyses of a bacterial homologue of hormone-sensitive lipase from a metagenomic library.

Authors:  Tri Duc Ngo; Bum Han Ryu; Hansol Ju; Eunjin Jang; Kwangsoo Park; Kyeong Kyu Kim; T Doohun Kim
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-08-15

4.  Role of the N terminus in enzyme activity, stability and specificity in thermophilic esterases belonging to the HSL family.

Authors:  Luigi Mandrich; Luigia Merone; Margherita Pezzullo; Laura Cipolla; Francesco Nicotra; Mosè Rossi; Giuseppe Manco
Journal:  J Mol Biol       Date:  2005-01-21       Impact factor: 5.469

5.  Analysis of the thermostability determinants of hyperthermophilic esterase EstE1 based on its predicted three-dimensional structure.

Authors:  Jin-Kyu Rhee; Do-Yun Kim; Dae-Gyun Ahn; Jung-Hyuk Yun; Seung-Hwan Jang; Hang-Cheol Shin; Hyun-Soo Cho; Jae-Gu Pan; Jong-Won Oh
Journal:  Appl Environ Microbiol       Date:  2006-04       Impact factor: 4.792

6.  Structural and functional analysis of a novel hormone-sensitive lipase from a metagenome library.

Authors:  Ki Hyun Nam; Min-Young Kim; Soo-Jin Kim; Amit Priyadarshi; Suk-Tae Kwon; Bon-Sung Koo; Sang-Hong Yoon; Kwang Yeon Hwang
Journal:  Proteins       Date:  2009-03

7.  Functional and structural features of the oxyanion hole in a thermophilic esterase from Alicyclobacillus acidocaldarius.

Authors:  Luigi Mandrich; Valeria Menchise; Vincenzo Alterio; Giuseppina De Simone; Carlo Pedone; Mosè Rossi; Giuseppe Manco
Journal:  Proteins       Date:  2008-06

8.  A thermostable and organic-solvent tolerant esterase from Pseudomonas putida ECU1011: catalytic properties and performance in kinetic resolution of α-hydroxy acids.

Authors:  Bao-Di Ma; Hui-Lei Yu; Jiang Pan; Jia-Yan Liu; Xin Ju; Jian-He Xu
Journal:  Bioresour Technol       Date:  2013-02-04       Impact factor: 9.642

9.  Comprehensive analysis of surface charged residues involved in thermal stability in Alicyclobacillus acidocaldarius esterase 2.

Authors:  Margherita Pezzullo; Pompea Del Vecchio; Luigi Mandrich; Roberto Nucci; Mosè Rossi; Giuseppe Manco
Journal:  Protein Eng Des Sel       Date:  2012-10-03       Impact factor: 1.650

10.  The crystal structure of a hyper-thermophilic carboxylesterase from the archaeon Archaeoglobus fulgidus.

Authors:  G De Simone; V Menchise; G Manco; L Mandrich; N Sorrentino; D Lang; M Rossi; C Pedone
Journal:  J Mol Biol       Date:  2001-11-30       Impact factor: 5.469

View more
  18 in total

1.  Functional characterization of hormone sensitive-like lipase from Bacillus halodurans: synthesis and recovery of pNP-laurate with high yields.

Authors:  Ashima Dua; Rani Gupta
Journal:  Extremophiles       Date:  2017-07-14       Impact factor: 2.395

2.  Structural and Mechanistic Insights into the Improvement of the Halotolerance of a Marine Microbial Esterase by Increasing Intra- and Interdomain Hydrophobic Interactions.

Authors:  Ping-Yi Li; Yi Zhang; Bin-Bin Xie; Yan-Qi Zhang; Jie Hao; Yue Wang; Peng Wang; Chun-Yang Li; Qi-Long Qin; Xi-Ying Zhang; Hai-Nan Su; Mei Shi; Yu-Zhong Zhang; Xiu-Lan Chen
Journal:  Appl Environ Microbiol       Date:  2017-08-31       Impact factor: 4.792

3.  New member of the hormone-sensitive lipase family from the permafrost microbial community.

Authors:  Lada E Petrovskaya; Ksenia A Novototskaya-Vlasova; Sultan Sh Gapizov; Elena V Spirina; Ekaterina V Durdenko; Elizaveta M Rivkina
Journal:  Bioengineered       Date:  2016-10-18       Impact factor: 3.269

4.  Identification and characterization of a novel carboxylesterase EstQ7 from a soil metagenomic library.

Authors:  Zhenzhen Yan; Liping Ding; Dandan Zou; Luyao Wang; Yuzhi Tan; Shuting Guo; Yingchen Zhang; Zhihong Xin
Journal:  Arch Microbiol       Date:  2021-05-31       Impact factor: 2.552

5.  Structural Basis for the Strict Substrate Selectivity of the Mycobacterial Hydrolase LipW.

Authors:  Magy G McKary; Jan Abendroth; Thomas E Edwards; R Jeremy Johnson
Journal:  Biochemistry       Date:  2016-12-12       Impact factor: 3.162

6.  A Novel Subfamily Esterase with a Homoserine Transacetylase-like Fold but No Transferase Activity.

Authors:  Ping-Yi Li; Qiong-Qiong Yao; Peng Wang; Yi Zhang; Yue Li; Yan-Qi Zhang; Jie Hao; Bai-Cheng Zhou; Xiu-Lan Chen; Mei Shi; Yu-Zhong Zhang; Xi-Ying Zhang
Journal:  Appl Environ Microbiol       Date:  2017-04-17       Impact factor: 4.792

Review 7.  Microbial esterases and ester prodrugs: An unlikely marriage for combating antibiotic resistance.

Authors:  Erik M Larsen; R Jeremy Johnson
Journal:  Drug Dev Res       Date:  2018-10-10       Impact factor: 4.360

8.  The first description of a hormone-sensitive lipase from a basidiomycete: Structural insights and biochemical characterization revealed Bjerkandera adusta BaEstB as a novel esterase.

Authors:  María Del Rayo Sánchez-Carbente; Ramón Alberto Batista-García; Ayixón Sánchez-Reyes; Angela Escudero-Garcia; Catalina Morales-Herrera; Laura I Cuervo-Soto; Leidys French-Pacheco; Arline Fernández-Silva; Carlos Amero; Edmundo Castillo; Jorge Luis Folch-Mallol
Journal:  Microbiologyopen       Date:  2017-03-01       Impact factor: 3.139

9.  Establishing knowledge on the sequence arrangement pattern of nucleated protein folding.

Authors:  Fei Leng; Chao Xu; Xia-Yu Xia; Xian-Ming Pan
Journal:  PLoS One       Date:  2017-03-08       Impact factor: 3.240

10.  A Novel Halotolerant Thermoalkaliphilic Esterase from Marine Bacterium Erythrobacter seohaensis SW-135.

Authors:  Ying-Yi Huo; Zhen Rong; Shu-Ling Jian; Cao-Di Xu; Jixi Li; Xue-Wei Xu
Journal:  Front Microbiol       Date:  2017-11-22       Impact factor: 5.640

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.