Literature DB >> 25762341

Fundamental constraints on the abundances of chemotaxis proteins.

Anne-Florence Bitbol1, Ned S Wingreen2.   

Abstract

Flagellated bacteria, such as Escherichia coli, perform directed motion in gradients of concentration of attractants and repellents in a process called chemotaxis. The E. coli chemotaxis signaling pathway is a model for signal transduction, but it has unique features. We demonstrate that the need for fast signaling necessitates high abundances of the proteins involved in this pathway. We show that further constraints on the abundances of chemotaxis proteins arise from the requirements of self-assembly both of flagellar motors and of chemoreceptor arrays. All these constraints are specific to chemotaxis, and published data confirm that chemotaxis proteins tend to be more highly expressed than their homologs in other pathways. Employing a chemotaxis pathway model, we show that the gain of the pathway at the level of the response regulator CheY increases with overall chemotaxis protein abundances. This may explain why, at least in one E. coli strain, the abundance of all chemotaxis proteins is higher in media with lower nutrient content. We also demonstrate that the E. coli chemotaxis pathway is particularly robust to abundance variations of the motor protein FliM.
Copyright © 2015 Biophysical Society. Published by Elsevier Inc. All rights reserved.

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Year:  2015        PMID: 25762341      PMCID: PMC4375530          DOI: 10.1016/j.bpj.2015.01.024

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  105 in total

1.  Rapid phosphotransfer to CheY from a CheA protein lacking the CheY-binding domain.

Authors:  R C Stewart; K Jahreis; J S Parkinson
Journal:  Biochemistry       Date:  2000-10-31       Impact factor: 3.162

2.  Functional characterization in vitro of all two-component signal transduction systems from Escherichia coli.

Authors:  Kaneyoshi Yamamoto; Kiyo Hirao; Taku Oshima; Hirofumi Aiba; Ryutaro Utsumi; Akira Ishihama
Journal:  J Biol Chem       Date:  2004-11-02       Impact factor: 5.157

3.  Design principles of a bacterial signalling network.

Authors:  Markus Kollmann; Linda Løvdok; Kilian Bartholomé; Jens Timmer; Victor Sourjik
Journal:  Nature       Date:  2005-11-24       Impact factor: 49.962

4.  Regulation of phosphatase activity in bacterial chemotaxis.

Authors:  Y Blat; B Gillespie; A Bren; F W Dahlquist; M Eisenbach
Journal:  J Mol Biol       Date:  1998-12-11       Impact factor: 5.469

5.  Protein mobility in the cytoplasm of Escherichia coli.

Authors:  M B Elowitz; M G Surette; P E Wolf; J B Stock; S Leibler
Journal:  J Bacteriol       Date:  1999-01       Impact factor: 3.490

6.  Mechanism for adaptive remodeling of the bacterial flagellar switch.

Authors:  Pushkar P Lele; Richard W Branch; Vedhavalli S J Nathan; Howard C Berg
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-19       Impact factor: 11.205

7.  FliG and FliM distribution in the Salmonella typhimurium cell and flagellar basal bodies.

Authors:  R Zhao; C D Amsler; P Matsumura; S Khan
Journal:  J Bacteriol       Date:  1996-01       Impact factor: 3.490

8.  Kinetic and mechanistic analyses of new classes of inhibitors of two-component signal transduction systems using a coupled assay containing HpkA-DrrA from Thermotoga maritima.

Authors:  J Estelle Foster; Qin Sheng; Jonathan R McClain; Mark Bures; Thalia I Nicas; Kenneth Henry; Malcolm E Winkler; Raymond Gilmour
Journal:  Microbiology       Date:  2004-04       Impact factor: 2.777

9.  Regulated underexpression of the FliM protein of Escherichia coli and evidence for a location in the flagellar motor distinct from the MotA/MotB torque generators.

Authors:  H Tang; D F Blair
Journal:  J Bacteriol       Date:  1995-06       Impact factor: 3.490

10.  Autophosphorylation and dephosphorylation by soluble forms of the nitrate-responsive sensors NarX and NarQ from Escherichia coli K-12.

Authors:  Chris E Noriega; Radomir Schmidt; Michael J Gray; Li-Ling Chen; Valley Stewart
Journal:  J Bacteriol       Date:  2008-03-28       Impact factor: 3.490

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  5 in total

1.  The expression of many chemoreceptor genes depends on the cognate chemoeffector as well as on the growth medium and phase.

Authors:  Diana López-Farfán; José Antonio Reyes-Darias; Tino Krell
Journal:  Curr Genet       Date:  2016-09-08       Impact factor: 3.886

Review 2.  Behavioral Variability and Phenotypic Diversity in Bacterial Chemotaxis.

Authors:  Adam James Waite; Nicholas W Frankel; Thierry Emonet
Journal:  Annu Rev Biophys       Date:  2018-04-04       Impact factor: 12.981

3.  Mathematical Analysis of the Escherichia coli Chemotaxis Signalling Pathway.

Authors:  Matthew P Edgington; Marcus J Tindall
Journal:  Bull Math Biol       Date:  2018-02-05       Impact factor: 1.758

4.  Robustness in an Ultrasensitive Motor.

Authors:  Guangzhe Liu; Antai Tao; Rongjing Zhang; Junhua Yuan
Journal:  mBio       Date:  2020-03-03       Impact factor: 7.867

5.  Bayesian-based decipherment of in-depth information in bacterial chemical sensing beyond pleasant/unpleasant responses.

Authors:  Hiroto Tanaka; Yasuaki Kazuta; Yasushi Naruse; Yukihiro Tominari; Hiroaki Umehara; Yoshiyuki Sowa; Takashi Sagawa; Kazuhiro Oiwa; Masato Okada; Ikuro Kawagishi; Hiroaki Kojima
Journal:  Sci Rep       Date:  2022-02-22       Impact factor: 4.379

  5 in total

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