Literature DB >> 25754136

The electronic mechanism ruling the dihydrogen bonds and halogen bonds in weakly bound systems of H3SiH···HOX and H 3SiH···XOH (X = F, Cl, and Br).

Boaz G Oliveira1, Abedin Zabardasti, Hamid Goudarziafshar, Maryam Salehnassaj.   

Abstract

The dihydrogen bond complexes (H3SiH∙∙∙HOX) and halogen bond complexes (H3SiH∙∙∙XOH) formed between SiH4 and hypohalous acids HOX (X = F, Cl, and Br) have been studied at the MP2/6-311++G(2d,2p) computational level. The analyses of structure and infrared vibration frequencies have revealed tendencies in the red shifts and blue shifts of the stretch frequencies of the Si-H, H-O, and O-X bonds. Besides the computation of the interaction energies, punctual atomic charges and charge transference amounts were determined at light of the Natural Bond Orbital (NBO) approach, by which the quantifications of the s- and p-characters of hydrogen, oxygen, and silicon also were useful to unveil the frequency shifts aforementioned. With the purpose to elucidate the donor/acceptor interface along the charge transfer mechanism between the dihydrogen bonds and halogen bonds, the application of the hierarchical cluster analysis (HCA) and principal component analysis (PCA) chemometric techniques were useful in this regard. Moreover, the interaction strengths of the H3SiH∙∙∙HOX and H3SiH∙∙∙XOH complexes was computed through a model that embodies the frequency shifts and topological parameters derived from quantum theory of atoms in molecules (QTAIM).

Entities:  

Year:  2015        PMID: 25754136     DOI: 10.1007/s00894-015-2616-2

Source DB:  PubMed          Journal:  J Mol Model        ISSN: 0948-5023            Impact factor:   1.810


  44 in total

1.  On the physical origin of blue-shifted hydrogen bonds.

Authors:  Xiaosong Li; Lei Liu; H Bernhard Schlegel
Journal:  J Am Chem Soc       Date:  2002-08-14       Impact factor: 15.419

2.  Directing macromolecular conformation through halogen bonds.

Authors:  Andrea Regier Voth; Franklin A Hays; P Shing Ho
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-22       Impact factor: 11.205

3.  How to determine whether intramolecular H...H interactions can be classified as dihydrogen bonds.

Authors:  Ibon Alkorta; José Elguero; Sławomir J Grabowski
Journal:  J Phys Chem A       Date:  2008-03-01       Impact factor: 2.781

4.  Blue shifts vs red shifts in sigma-hole bonding.

Authors:  Jane S Murray; Monica C Concha; Pat Lane; Pavel Hobza; Peter Politzer
Journal:  J Mol Model       Date:  2008-04-26       Impact factor: 1.810

Review 5.  Competing intramolecular vs. intermolecular hydrogen bonds in solution.

Authors:  Peter I Nagy
Journal:  Int J Mol Sci       Date:  2014-10-28       Impact factor: 5.923

6.  Interplay between halogen bonds and hydrogen bonds in OH/SH···HOX···HY (X = Cl, Br; Y = F, Cl, Br) complexes.

Authors:  Wenjie Wu; Yanli Zeng; Xiaoyan Li; Xueying Zhang; Shijun Zheng; Lingpeng Meng
Journal:  J Mol Model       Date:  2012-11-01       Impact factor: 1.810

7.  Charge transfer and blue shifting of vibrational frequencies in a hydrogen bond acceptor.

Authors:  Ashley M Wright; Austin A Howard; J Coleman Howard; Gregory S Tschumper; Nathan I Hammer
Journal:  J Phys Chem A       Date:  2013-05-24       Impact factor: 2.781

8.  Existence of both blue-shifting hydrogen bond and Lewis acid-base interaction in the complexes of carbonyls and thiocarbonyls with carbon dioxide.

Authors:  Tien Trung Nguyen; Phi Hung Nguyen; Thanh Hue Tran; Tho Nguyen Minh
Journal:  Phys Chem Chem Phys       Date:  2011-06-16       Impact factor: 3.676

9.  Halogen bonding: the sigma-hole. Proceedings of "Modeling interactions in biomolecules II", Prague, September 5th-9th, 2005.

Authors:  Timothy Clark; Matthias Hennemann; Jane S Murray; Peter Politzer
Journal:  J Mol Model       Date:  2006-08-23       Impact factor: 1.810

10.  A chemometrical study of intermolecular properties of hydrogen-bonded complexes formed by C2H4O...HX and C2H5N...HX with X = F, CN, NC, and CCH.

Authors:  Boaz G Oliveira; Regiane C M U Araújo; Antônio B Carvalho; Mozart N Ramos
Journal:  J Mol Model       Date:  2008-12-13       Impact factor: 1.810

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  1 in total

1.  The interaction strengths and spectroscopy parameters of the C2H2∙∙∙HX and HCN∙∙∙HX complexes (X = F, Cl, CN, and CCH) and related ternary systems valued by fluxes of charge densities: QTAIM, CCFO, and NBO calculations.

Authors:  Marco A A Viana; Regiane C M U Araújo; José A Maia Neto; Henrique C Chame; Arquimedes M Pereira; Boaz G Oliveira
Journal:  J Mol Model       Date:  2017-03-11       Impact factor: 1.810

  1 in total

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