Literature DB >> 25740809

Cell dedifferentiation and organogenesis in vitro require more snRNA than does seedling development in Arabidopsis thaliana.

Misato Ohtani1, Arika Takebayashi, Ryoko Hiroyama, Bo Xu, Toru Kudo, Hitoshi Sakakibara, Munetaka Sugiyama, Taku Demura.   

Abstract

Small nuclear RNA (snRNA) is a class of non-coding RNAs that processes pre-mRNA and rRNA. Transcription of abundant snRNA species is regulated by the snRNA activating protein complex (SNAPc), which is conserved among multicellular organisms including plants. SRD2, a putative subunit of SNAPc in Arabidopsis thaliana, is essential for development, and the point mutation srd2-1 causes severe defects in hypocotyl dedifferentiation and de novo meristem formation. Based on phenotypic analysis of srd2-1 mutant plants, we previously proposed that snRNA content is a limiting factor in dedifferentiation in plant cells. Here, we performed functional complementation analysis of srd2-1 using transgenic srd2-1 Arabidopsis plants harboring SRD2 homologs from Populus trichocarpa (poplar), Nicotiana tabacum (tobacco), Oryza sativa (rice), the moss Physcomitrella patens, and Homo sapiens (human) under the control of the Arabidopsis SRD2 promoter. Only rice SRD2 suppressed the faulty tissue culture responses of srd2-1, and restore the snRNA levels; however, interestingly, all SRD2 homologs except poplar SRD2 rescued the srd2-1 defects in seedling development. These findings demonstrated that cell dedifferentiation and organogenesis induced during tissue culture require higher snRNA levels than does seedling development.

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Year:  2015        PMID: 25740809     DOI: 10.1007/s10265-015-0704-0

Source DB:  PubMed          Journal:  J Plant Res        ISSN: 0918-9440            Impact factor:   2.629


  28 in total

Review 1.  Regulation of snRNA gene expression by the Drosophila melanogaster small nuclear RNA activating protein complex (DmSNAPc).

Authors:  Ko-Hsuan Hung; William E Stumph
Journal:  Crit Rev Biochem Mol Biol       Date:  2010-10-06       Impact factor: 8.250

Review 2.  Eukaryotic snoRNAs: a paradigm for gene expression flexibility.

Authors:  Giorgio Dieci; Milena Preti; Barbara Montanini
Journal:  Genomics       Date:  2009-05-13       Impact factor: 5.736

3.  Cytokinin activity of cis-zeatin and phenotypic alterations induced by overexpression of putative cis-Zeatin-O-glucosyltransferase in rice.

Authors:  Toru Kudo; Nobue Makita; Mikiko Kojima; Hiroki Tokunaga; Hitoshi Sakakibara
Journal:  Plant Physiol       Date:  2012-07-17       Impact factor: 8.340

4.  Involvement of SRD2-mediated activation of snRNA transcription in the control of cell proliferation competence in Arabidopsis.

Authors:  Misato Ohtani; Munetaka Sugiyama
Journal:  Plant J       Date:  2005-08       Impact factor: 6.417

5.  Particular significance of SRD2-dependent snRNA accumulation in polarized pattern generation during lateral root development of Arabidopsis.

Authors:  Misato Ohtani; Taku Demura; Munetaka Sugiyama
Journal:  Plant Cell Physiol       Date:  2010-10-21       Impact factor: 4.927

6.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

7.  Arabidopsis root initiation defective1, a DEAH-box RNA helicase involved in pre-mRNA splicing, is essential for plant development.

Authors:  Misato Ohtani; Taku Demura; Munetaka Sugiyama
Journal:  Plant Cell       Date:  2013-06-14       Impact factor: 11.277

8.  Oct-1 and Oct-2 potentiate functional interactions of a transcription factor with the proximal sequence element of small nuclear RNA genes.

Authors:  S Murphy; J B Yoon; T Gerster; R G Roeder
Journal:  Mol Cell Biol       Date:  1992-07       Impact factor: 4.272

9.  Differential requirement for the function of SRD2, an snRNA transcription activator, in various stages of plant development.

Authors:  Misato Ohtani; Taku Demura; Munetaka Sugiyama
Journal:  Plant Mol Biol       Date:  2007-12-07       Impact factor: 4.076

10.  The tobacco genome sequence and its comparison with those of tomato and potato.

Authors:  Nicolas Sierro; James N D Battey; Sonia Ouadi; Nicolas Bakaher; Lucien Bovet; Adrian Willig; Simon Goepfert; Manuel C Peitsch; Nikolai V Ivanov
Journal:  Nat Commun       Date:  2014-05-08       Impact factor: 14.919

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  5 in total

1.  Regulation of RNA metabolism is important for in vitro dedifferentiation of plant cells.

Authors:  Misato Ohtani
Journal:  J Plant Res       Date:  2015-02-19       Impact factor: 2.629

Review 2.  Transcriptional regulation of snRNAs and its significance for plant development.

Authors:  Misato Ohtani
Journal:  J Plant Res       Date:  2016-11-29       Impact factor: 2.629

3.  Cytokinin-overinduced transcription factors and thalianol cluster genes in CARBOXYL-TERMINAL DOMAIN PHOSPHATASE-LIKE 4-silenced Arabidopsis roots during de novo shoot organogenesis.

Authors:  Akihito Fukudome; Hisashi Koiwa
Journal:  Plant Signal Behav       Date:  2018-09-06

4.  Alternative splicing of DSP1 enhances snRNA accumulation by promoting transcription termination and recycle of the processing complex.

Authors:  Weili Wang; Xuepiao Pu; Siyu Yang; Yujie Feng; Chan Lin; Mu Li; Xi Li; Huali Li; Chunmei Meng; Qingjun Xie; Bin Yu; Yunfeng Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-03       Impact factor: 11.205

Review 5.  Plant snRNP Biogenesis: A Perspective from the Nucleolus and Cajal Bodies.

Authors:  Misato Ohtani
Journal:  Front Plant Sci       Date:  2018-01-04       Impact factor: 5.753

  5 in total

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