Literature DB >> 18064403

Differential requirement for the function of SRD2, an snRNA transcription activator, in various stages of plant development.

Misato Ohtani1, Taku Demura, Munetaka Sugiyama.   

Abstract

Small nuclear RNA (snRNA) is a class of eukaryotic noncoding RNAs, which have essential roles in pre-mRNA splicing and rRNA processing. As these functions are fundamental to cell activities, the regulation of snRNA transcription should be a vital issue for all eukaryotes. Here we address developmental control of snRNA transcription and its significance through the analysis of the SRD2 gene of Arabidopsis (Arabidopsis thaliana), which encodes an activator of snRNA transcription. In young seedlings, a high level of SRD2 expression was observed in shoot and root apical meristems, leaf primordia, and root stele tissues, where a large amount of snRNA accumulated. In mature plants, SRD2 was highly expressed in developing leaves and flowers as well as apical meristems. Mutations in the SRD2 gene interfered with many, but not all, aspects of development in the regions that showed strong expression of SRD2. Of note, establishment of the fully active state of apical meristems in the seedling stage was very sensitive to the srd2-1 mutation, while maintenance of the established meristems was substantially insensitive. These results demonstrated differential requirement for the SRD2 function in various stages of plant development.

Entities:  

Mesh:

Substances:

Year:  2007        PMID: 18064403     DOI: 10.1007/s11103-007-9271-7

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  15 in total

1.  Isolation and initial characterization of temperature-sensitive mutants of Arabidopsis thaliana that are impaired in root redifferentiation.

Authors:  Munetaka Sugiyama
Journal:  Plant Cell Physiol       Date:  2003-06       Impact factor: 4.927

2.  Isolation of Temperature-Sensitive Mutants of Arabidopsis thaliana That Are Defective in the Redifferentiation of Shoots.

Authors:  I. Yasutani; S. Ozawa; T. Nishida; M. Sugiyama; A. Komamine
Journal:  Plant Physiol       Date:  1994-07       Impact factor: 8.340

3.  The HALTED ROOT gene encoding the 26S proteasome subunit RPT2a is essential for the maintenance of Arabidopsis meristems.

Authors:  Minako Ueda; Keisuke Matsui; Sumie Ishiguro; Ryosuke Sano; Takuji Wada; Ivan Paponov; Klaus Palme; Kiyotaka Okada
Journal:  Development       Date:  2004-04-08       Impact factor: 6.868

4.  Differential alterations in metabolic pattern of the six major UsnRNAs during development.

Authors:  R Ray; K Ray; C K Panda
Journal:  Mol Cell Biochem       Date:  1997-12       Impact factor: 3.396

5.  Involvement of SRD2-mediated activation of snRNA transcription in the control of cell proliferation competence in Arabidopsis.

Authors:  Misato Ohtani; Munetaka Sugiyama
Journal:  Plant J       Date:  2005-08       Impact factor: 6.417

6.  Floral dip: a simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana.

Authors:  S J Clough; A F Bent
Journal:  Plant J       Date:  1998-12       Impact factor: 6.417

7.  Targeting TBP to a non-TATA box cis-regulatory element: a TBP-containing complex activates transcription from snRNA promoters through the PSE.

Authors:  C L Sadowski; R W Henry; S M Lobo; N Hernandez
Journal:  Genes Dev       Date:  1993-08       Impact factor: 11.361

8.  Oct-1 and Oct-2 potentiate functional interactions of a transcription factor with the proximal sequence element of small nuclear RNA genes.

Authors:  S Murphy; J B Yoon; T Gerster; R G Roeder
Journal:  Mol Cell Biol       Date:  1992-07       Impact factor: 4.272

9.  Architectural arrangement of cloned proximal sequence element-binding protein subunits on Drosophila U1 and U6 snRNA gene promoters.

Authors:  Cheng Li; Gale A Harding; Jason Parise; Kathleen J McNamara-Schroeder; William E Stumph
Journal:  Mol Cell Biol       Date:  2004-03       Impact factor: 4.272

10.  Organogenic responses in tissue culture of srd mutants of Arabidopsis thaliana.

Authors:  S Ozawa; I Yasutani; H Fukuda; A Komamine; M Sugiyama
Journal:  Development       Date:  1998-01       Impact factor: 6.868

View more
  11 in total

1.  DSP1 and DSP4 Act Synergistically in Small Nuclear RNA 3' End Maturation and Pollen Growth.

Authors:  Xuepiao Pu; Chunmei Meng; Weili Wang; Siyu Yang; Yuan Chen; Qingjun Xie; Bin Yu; Yunfeng Liu
Journal:  Plant Physiol       Date:  2019-06-21       Impact factor: 8.340

2.  Twist of fate: RID1, a DEAH-box RNA helicase involved in pre-mRNA splicing, is crucial for development.

Authors:  Jennifer Lockhart
Journal:  Plant Cell       Date:  2013-06-14       Impact factor: 11.277

3.  Regulation of RNA metabolism is important for in vitro dedifferentiation of plant cells.

Authors:  Misato Ohtani
Journal:  J Plant Res       Date:  2015-02-19       Impact factor: 2.629

Review 4.  Transcriptional regulation of snRNAs and its significance for plant development.

Authors:  Misato Ohtani
Journal:  J Plant Res       Date:  2016-11-29       Impact factor: 2.629

Review 5.  How do 'housekeeping' genes control organogenesis?--Unexpected new findings on the role of housekeeping genes in cell and organ differentiation.

Authors:  Hirokazu Tsukaya; Mary E Byrne; Gorou Horiguchi; Munetaka Sugiyama; Mieke Van Lijsebettens; Michael Lenhard
Journal:  J Plant Res       Date:  2012-08-26       Impact factor: 2.629

6.  VND-INTERACTING2, a NAC domain transcription factor, negatively regulates xylem vessel formation in Arabidopsis.

Authors:  Masatoshi Yamaguchi; Misato Ohtani; Nobutaka Mitsuda; Minoru Kubo; Masaru Ohme-Takagi; Hiroo Fukuda; Taku Demura
Journal:  Plant Cell       Date:  2010-04-13       Impact factor: 11.277

7.  Alternative splicing of DSP1 enhances snRNA accumulation by promoting transcription termination and recycle of the processing complex.

Authors:  Weili Wang; Xuepiao Pu; Siyu Yang; Yujie Feng; Chan Lin; Mu Li; Xi Li; Huali Li; Chunmei Meng; Qingjun Xie; Bin Yu; Yunfeng Liu
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-03       Impact factor: 11.205

8.  Cell dedifferentiation and organogenesis in vitro require more snRNA than does seedling development in Arabidopsis thaliana.

Authors:  Misato Ohtani; Arika Takebayashi; Ryoko Hiroyama; Bo Xu; Toru Kudo; Hitoshi Sakakibara; Munetaka Sugiyama; Taku Demura
Journal:  J Plant Res       Date:  2015-03-05       Impact factor: 2.629

9.  Arabidopsis root initiation defective1, a DEAH-box RNA helicase involved in pre-mRNA splicing, is essential for plant development.

Authors:  Misato Ohtani; Taku Demura; Munetaka Sugiyama
Journal:  Plant Cell       Date:  2013-06-14       Impact factor: 11.277

10.  Functional and evolutionary analysis of the Arabidopsis 4R-MYB protein SNAPc4 as part of the SNAP complex.

Authors:  Katharina Thiedig; Bernd Weisshaar; Ralf Stracke
Journal:  Plant Physiol       Date:  2021-04-02       Impact factor: 8.340

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.