Literature DB >> 25716091

Gene expression, chromosome heterogeneity and the fast-X effect in mammals.

Linh-Phuong Nguyen1, Nicolas Galtier1, Benoit Nabholz2.   

Abstract

The higher rate of non-synonymous over synonymous substitutions (dN/dS) of the X chromosome compared with autosomes is often interpreted as a consequence of X hemizygosity. However, other factors, such as gene expression, are also known to vary between X and autosomes. Analysing 4800 orthologues in six mammals, we found that gene expression levels, associated with GC content, fully account for the variation in dN/dS between X and autosomes with no detectable effect of hemizygosity. We also report an extensive variance in dN/dS and gene expression between autosomes.
© 2015 The Author(s) Published by the Royal Society. All rights reserved.

Keywords:  X chromosome; fast-X; gene expression; hemizygosity; non-synonymous substitutions; synonymous substitutions

Mesh：

Year:  2015        PMID： 25716091      PMCID： PMC4360113          DOI： 10.1098/rsbl.2015.0010

Source DB:  PubMed          Journal:  Biol Lett        ISSN： 1744-9561            Impact factor:   3.703


  14 in total

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