| Literature DB >> 25705474 |
Zhimin Liu1, Shengrun Zheng2, Sisi Feng3.
Abstract
In the title compound, [Cu(C10H9N2O2)(C10H10N2O2)], the Cu(I) ion is situated at a crystallographic centre of inversion and is coordinated in a linear environment by two benzimidazole N atoms from two symmetry-related 2-propanoic-1H-benzimidazole ligands. The ligands are disordered in a sense that statistically one of the carb-oxy-lic acid groups in each mol-ecule is deprotonated. In the crystal, O-H⋯O hydrogen bonds link the mol-ecules into chains along the a-axis direction. These chains are additionally linked into infinite two-dimensional networks in the ab plane by N-H⋯O hydrogen bonds.Entities:
Keywords: 3-(1H-benzimidazol-2-yl)propanoic acid; copper(I); crystal structure; hydrogen bonding
Year: 2015 PMID: 25705474 PMCID: PMC4331864 DOI: 10.1107/S2056989014026656
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
| [Cu(C10H9N2O2)(C10H10N2O2)] | |
| Monoclinic, | Mo |
| Hall symbol: -C 2yc | Cell parameters from 1118 reflections |
| θ = 2.3–22.1° | |
| µ = 1.19 mm−1 | |
| β = 121.949 (2)° | Block, yellow |
| 0.28 × 0.24 × 0.20 mm | |
| Bruker APEXII CCD diffractometer | 1855 independent reflections |
| Radiation source: fine-focus sealed tube | 1370 reflections with |
| Graphite monochromator | |
| φ and ω scans | θmax = 26.0°, θmin = 2.3° |
| Absorption correction: multi-scan ( | |
| 4975 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 1855 reflections | (Δ/σ)max < 0.001 |
| 134 parameters | Δρmax = 0.29 e Å−3 |
| 0 restraints | Δρmin = −0.26 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| Refinement. Refinement of |
| Occ. (<1) | |||||
| Cu1 | 0.2500 | 0.2500 | 0.0000 | 0.0438 (2) | |
| N1 | 0.22545 (12) | 0.4838 (3) | 0.04227 (16) | 0.0377 (5) | |
| N2 | 0.16621 (13) | 0.7649 (3) | 0.03970 (17) | 0.0406 (6) | |
| H2A | 0.1312 | 0.8548 | 0.0199 | 0.049* | |
| C1 | 0.27220 (15) | 0.5977 (4) | 0.12627 (19) | 0.0359 (6) | |
| C7 | 0.16303 (15) | 0.5906 (4) | −0.00686 (19) | 0.0369 (6) | |
| C6 | 0.23477 (16) | 0.7750 (4) | 0.1243 (2) | 0.0386 (6) | |
| C2 | 0.34360 (16) | 0.5579 (5) | 0.2038 (2) | 0.0480 (7) | |
| H2 | 0.3692 | 0.4396 | 0.2059 | 0.058* | |
| C9 | 0.03220 (15) | 0.4427 (4) | −0.0953 (2) | 0.0441 (7) | |
| H9A | 0.0238 | 0.5342 | −0.0548 | 0.053* | |
| H9B | −0.0124 | 0.4456 | −0.1598 | 0.053* | |
| C10 | 0.04164 (16) | 0.2279 (4) | −0.0559 (2) | 0.0418 (7) | |
| C5 | 0.26760 (17) | 0.9213 (5) | 0.1980 (2) | 0.0496 (8) | |
| H5 | 0.2430 | 1.0421 | 0.1954 | 0.059* | |
| C8 | 0.09664 (15) | 0.5287 (5) | −0.1016 (2) | 0.0439 (7) | |
| H8A | 0.1118 | 0.4256 | −0.1310 | 0.053* | |
| H8B | 0.0789 | 0.6475 | −0.1443 | 0.053* | |
| C3 | 0.37526 (18) | 0.7010 (5) | 0.2779 (2) | 0.0520 (8) | |
| H3 | 0.4228 | 0.6775 | 0.3314 | 0.062* | |
| C4 | 0.33771 (18) | 0.8787 (5) | 0.2743 (2) | 0.0532 (8) | |
| H4 | 0.3609 | 0.9718 | 0.3254 | 0.064* | |
| O2 | −0.00441 (13) | 0.1776 (3) | −0.03148 (19) | 0.0594 (6) | |
| H2B | 0.0009 | 0.0554 | −0.0166 | 0.089* | 0.50 |
| O1 | 0.08916 (14) | 0.1136 (4) | −0.05134 (19) | 0.0717 (7) |
| Cu1 | 0.0501 (3) | 0.0312 (3) | 0.0496 (3) | 0.0076 (2) | 0.0261 (3) | −0.0045 (2) |
| N1 | 0.0411 (12) | 0.0305 (13) | 0.0430 (13) | 0.0056 (10) | 0.0234 (11) | 0.0001 (10) |
| N2 | 0.0450 (13) | 0.0300 (13) | 0.0523 (15) | 0.0121 (11) | 0.0295 (12) | 0.0029 (11) |
| C1 | 0.0414 (15) | 0.0297 (15) | 0.0442 (16) | 0.0002 (12) | 0.0278 (13) | −0.0006 (12) |
| C7 | 0.0421 (15) | 0.0327 (15) | 0.0406 (15) | 0.0062 (13) | 0.0250 (13) | 0.0068 (12) |
| C6 | 0.0456 (16) | 0.0323 (16) | 0.0483 (16) | 0.0016 (13) | 0.0319 (14) | 0.0006 (13) |
| C2 | 0.0433 (16) | 0.0448 (19) | 0.0552 (19) | 0.0062 (14) | 0.0256 (15) | 0.0004 (15) |
| C9 | 0.0420 (16) | 0.0406 (18) | 0.0459 (17) | 0.0105 (13) | 0.0207 (14) | 0.0035 (13) |
| C10 | 0.0392 (15) | 0.0414 (18) | 0.0429 (16) | 0.0052 (14) | 0.0203 (13) | −0.0018 (13) |
| C5 | 0.061 (2) | 0.0399 (18) | 0.061 (2) | −0.0009 (15) | 0.0415 (18) | −0.0099 (15) |
| C8 | 0.0484 (16) | 0.0423 (18) | 0.0426 (16) | 0.0092 (14) | 0.0252 (14) | 0.0075 (13) |
| C3 | 0.0431 (17) | 0.062 (2) | 0.0504 (18) | −0.0074 (15) | 0.0242 (15) | −0.0065 (16) |
| C4 | 0.058 (2) | 0.055 (2) | 0.0547 (19) | −0.0152 (17) | 0.0351 (17) | −0.0184 (16) |
| O2 | 0.0629 (14) | 0.0438 (13) | 0.0855 (17) | −0.0025 (12) | 0.0489 (14) | −0.0009 (13) |
| O1 | 0.0807 (16) | 0.0472 (15) | 0.111 (2) | 0.0285 (13) | 0.0671 (16) | 0.0266 (14) |
| Cu1—N1i | 1.851 (2) | C9—C8 | 1.526 (4) |
| Cu1—N1 | 1.851 (2) | C9—H9A | 0.9700 |
| N1—C7 | 1.321 (3) | C9—H9B | 0.9700 |
| N1—C1 | 1.399 (3) | C10—O1 | 1.220 (3) |
| N2—C7 | 1.343 (3) | C10—O2 | 1.273 (3) |
| N2—C6 | 1.373 (4) | C5—C4 | 1.366 (4) |
| N2—H2A | 0.8600 | C5—H5 | 0.9300 |
| C1—C2 | 1.385 (4) | C8—H8A | 0.9700 |
| C1—C6 | 1.388 (4) | C8—H8B | 0.9700 |
| C7—C8 | 1.488 (4) | C3—C4 | 1.384 (4) |
| C6—C5 | 1.392 (4) | C3—H3 | 0.9300 |
| C2—C3 | 1.381 (4) | C4—H4 | 0.9300 |
| C2—H2 | 0.9300 | O2—H2B | 0.8200 |
| C9—C10 | 1.504 (4) | ||
| N1i—Cu1—N1 | 180.00 (13) | C10—C9—H9B | 108.2 |
| C7—N1—C1 | 106.0 (2) | C8—C9—H9B | 108.2 |
| C7—N1—Cu1 | 126.43 (19) | H9A—C9—H9B | 107.3 |
| C1—N1—Cu1 | 127.13 (17) | O1—C10—O2 | 124.5 (3) |
| C7—N2—C6 | 108.4 (2) | O1—C10—C9 | 120.7 (3) |
| C7—N2—H2A | 125.8 | O2—C10—C9 | 114.8 (2) |
| C6—N2—H2A | 125.8 | C4—C5—C6 | 116.7 (3) |
| C2—C1—C6 | 120.6 (3) | C4—C5—H5 | 121.7 |
| C2—C1—N1 | 130.9 (3) | C6—C5—H5 | 121.7 |
| C6—C1—N1 | 108.5 (2) | C7—C8—C9 | 114.6 (2) |
| N1—C7—N2 | 111.5 (2) | C7—C8—H8A | 108.6 |
| N1—C7—C8 | 125.2 (2) | C9—C8—H8A | 108.6 |
| N2—C7—C8 | 123.3 (2) | C7—C8—H8B | 108.6 |
| N2—C6—C1 | 105.7 (2) | C9—C8—H8B | 108.6 |
| N2—C6—C5 | 132.5 (3) | H8A—C8—H8B | 107.6 |
| C1—C6—C5 | 121.9 (3) | C2—C3—C4 | 121.4 (3) |
| C3—C2—C1 | 117.3 (3) | C2—C3—H3 | 119.3 |
| C3—C2—H2 | 121.3 | C4—C3—H3 | 119.3 |
| C1—C2—H2 | 121.3 | C5—C4—C3 | 122.0 (3) |
| C10—C9—C8 | 116.5 (2) | C5—C4—H4 | 119.0 |
| C10—C9—H9A | 108.2 | C3—C4—H4 | 119.0 |
| C8—C9—H9A | 108.2 | C10—O2—H2B | 109.5 |
| C7—N1—C1—C2 | 179.1 (3) | C2—C1—C6—C5 | 1.7 (4) |
| Cu1—N1—C1—C2 | −8.4 (4) | N1—C1—C6—C5 | −179.1 (2) |
| C7—N1—C1—C6 | 0.0 (3) | C6—C1—C2—C3 | 0.0 (4) |
| Cu1—N1—C1—C6 | 172.48 (18) | N1—C1—C2—C3 | −179.0 (3) |
| C1—N1—C7—N2 | −0.2 (3) | C8—C9—C10—O1 | −16.7 (4) |
| Cu1—N1—C7—N2 | −172.78 (17) | C8—C9—C10—O2 | 165.2 (3) |
| C1—N1—C7—C8 | −179.9 (2) | N2—C6—C5—C4 | 178.6 (3) |
| Cu1—N1—C7—C8 | 7.5 (4) | C1—C6—C5—C4 | −2.2 (4) |
| C6—N2—C7—N1 | 0.4 (3) | N1—C7—C8—C9 | 103.1 (3) |
| C6—N2—C7—C8 | −180.0 (2) | N2—C7—C8—C9 | −76.5 (3) |
| C7—N2—C6—C1 | −0.4 (3) | C10—C9—C8—C7 | −74.7 (3) |
| C7—N2—C6—C5 | 178.9 (3) | C1—C2—C3—C4 | −1.0 (4) |
| C2—C1—C6—N2 | −179.0 (2) | C6—C5—C4—C3 | 1.2 (4) |
| N1—C1—C6—N2 | 0.2 (3) | C2—C3—C4—C5 | 0.4 (5) |
| H··· | ||||
| N2—H2 | 0.86 | 1.97 | 2.725 (3) | 146 |
| O2—H2 | 0.82 | 1.69 | 2.491 (5) | 166 |
Hydrogen-bond geometry (, )
|
|
| H |
|
|
|---|---|---|---|---|
| N2H2 | 0.86 | 1.97 | 2.725(3) | 146 |
| O2H2 | 0.82 | 1.69 | 2.491(5) | 166 |
Symmetry codes: (i) ; (ii) .