| Literature DB >> 25705438 |
R A Nagalakshmi1, J Suresh1, S Maharani2, R Ranjith Kumar2, P L Nilantha Lakshman3.
Abstract
In the title compounds, C24H22BrN3, (I), and C24H22ClN3, (II), the 2-amino-pyridine ring is fused with a cyclo-heptane ring, which adopts a half-chair conformation. The planes of the phenyl and benzene rings are inclined to that of the central pyridine ring [r.m.s. deviations = 0.0083 (1) and 0.0093 (1) Å for (I) and (II), respectively] by 62.47 (17) and 72.51 (14)°, respectively, in (I), and by 71.44 (9) and 54.90 (8)°, respectively, in (II). The planes of the aromatic rings are inclined to one another by 53.82 (17)° in (I) and by 58.04 (9)° in (II). In the crystals of both (I) and (II), pairs of N-H⋯Nnitrile hydrogen bonds link the mol-ecules, forming inversion dimers with R 2 (2)(12) ring motifs. In (I), the resulting dimers are connected through C-H⋯Br hydrogen bonds, forming sheets parallel to (10-1), and π-π inter-actions [inter-centroid distance = 3.7821 (16) Å] involving inversion-related pyridine rings, forming a three-dimensional network. In (II), the resulting dimers are connected through π-π inter-actions [inter-centroid distance = 3.771 (2) Å] involving inversion-related pyridine rings, forming a two-dimensional network lying parallel to (001).Entities:
Keywords: carbonitrile; crystal structure; cyclohepta[b]pyridine; hydrogen bonding; π–π interactions
Year: 2015 PMID: 25705438 PMCID: PMC4331894 DOI: 10.1107/S2056989014025936
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of compound (I), showing 50% probability displacement ellipsoids and the atom labelling.
Figure 2The molecular structure of (II), showing 50% probability displacement ellipsoids and the atom labelling.
Hydrogen-bond geometry (, ) for (I)
|
|
| H |
|
|
|---|---|---|---|---|
| N2H2N1i | 0.86 | 2.28 | 3.010(3) | 143 |
| C21H21 | 0.97 | 2.90 | 3.703(3) | 141 |
Symmetry codes: (i) ; (ii) .
Figure 3Crystal packing diagram of compound (I), viewed along the b axis. Hydrogen bonds (see Table 1 ▸ for details) and π–π interactions are shown as dashed lines (centroids are shown as small circles). H atoms not involved in hydrogen bonding have been omitted for clarity.
Hydrogen-bond geometry (, ) for (II)
|
|
| H |
|
|
|---|---|---|---|---|
| N2H2N1i | 0.86 | 2.26 | 3.007(2) | 145 |
Symmetry code: (i) .
Figure 4Crystal packing diagram of compound (II), viewed along the b axis. Hydrogen bonds (see Table 2 ▸ for details) and π–π interactions are shown as dashed lines (centroids are shown as small circles). H atoms not involved in hydrogen bonding have been omitted for clarity.
Experimental details
| (I) | (II) | |
|---|---|---|
| Crystal data | ||
| Chemical formula | C24H22BrN3 | C24H22ClN3 |
|
| 432.35 | 387.89 |
| Crystal system, space group | Monoclinic, | Triclinic, |
| Temperature (K) | 293 | 293 |
|
| 8.9710(3), 9.3794(4), 24.9788(9) | 9.002(5), 10.097(5), 11.856(5) |
| , , () | 90, 99.002(2), 90 | 94.939(5), 108.204(5), 101.272(5) |
|
| 2075.89(14) | 991.3(8) |
|
| 4 | 2 |
| Radiation type | Mo | Mo |
| (mm1) | 1.99 | 0.21 |
| Crystal size (mm) | 0.21 0.19 0.18 | 0.21 0.19 0.18 |
| Data collection | ||
| Diffractometer | Bruker Kappa APEXII | Bruker Kappa APEXII |
| Absorption correction | Multi-scan ( | Multi-scan ( |
|
| 0.967, 0.974 | 0.967, 0.974 |
| No. of measured, independent and observed [ | 51599, 3863, 2927 | 24808, 3685, 2918 |
|
| 0.040 | 0.026 |
| (sin /)max (1) | 0.606 | 0.606 |
| Refinement | ||
|
| 0.041, 0.099, 1.10 | 0.037, 0.105, 1.05 |
| No. of reflections | 3863 | 3685 |
| No. of parameters | 253 | 253 |
| No. of restraints | 0 | 1 |
| H-atom treatment | H-atom parameters constrained | H-atom parameters constrained |
| max, min (e 3) | 0.42, 0.58 | 0.19, 0.33 |
Computer programs: APEX2 and SAINT (Bruker, 2004 ▸), SHELXS97, SHELXL97 and SHELXL2014 (Sheldrick, 2008 ▸) and PLATON (Spek, 2009 ▸).
| C24H22ClN3 | |
| Triclinic, | |
| Mo | |
| Cell parameters from 2000 reflections | |
| θ = 2–31° | |
| α = 94.939 (5)° | µ = 0.21 mm−1 |
| β = 108.204 (5)° | |
| γ = 101.272 (5)° | Block, colourless |
| 0.21 × 0.19 × 0.18 mm |
| Bruker Kappa APEXII diffractometer | 2918 reflections with |
| Radiation source: fine-focus sealed tube | |
| ω and φ scans | θmax = 25.5°, θmin = 2.1° |
| Absorption correction: multi-scan ( | |
| 24808 measured reflections | |
| 3685 independent reflections |
| Refinement on | 1 restraint |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 3685 reflections | Δρmax = 0.19 e Å−3 |
| 253 parameters | Δρmin = −0.33 e Å−3 |
| Geometry. All e.s.d.'s (except the e.s.d. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of e.s.d.'s in distances, angles and torsion angles; correlations between e.s.d.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell e.s.d.'s is used for estimating e.s.d.'s involving l.s. planes. |
| C1 | 0.1170 (2) | 0.47342 (18) | 0.36822 (15) | 0.0401 (4) | |
| C2 | 0.24864 (18) | 0.41014 (15) | 0.38041 (14) | 0.0327 (3) | |
| C3 | 0.32569 (17) | 0.40885 (15) | 0.29430 (13) | 0.0304 (3) | |
| C4 | 0.44508 (17) | 0.33539 (15) | 0.30821 (14) | 0.0321 (3) | |
| C5 | 0.48147 (17) | 0.26963 (15) | 0.40915 (14) | 0.0331 (3) | |
| C6 | 0.29611 (17) | 0.34315 (15) | 0.48044 (14) | 0.0320 (3) | |
| C7 | 0.53288 (19) | 0.32240 (17) | 0.21988 (15) | 0.0395 (4) | |
| H7A | 0.6478 | 0.3489 | 0.2631 | 0.047* | |
| H7B | 0.5074 | 0.3854 | 0.1633 | 0.047* | |
| C8 | 0.4910 (2) | 0.17808 (19) | 0.14983 (16) | 0.0477 (4) | |
| H8A | 0.3760 | 0.1411 | 0.1274 | 0.057* | |
| H8B | 0.5158 | 0.1839 | 0.0762 | 0.057* | |
| C9 | 0.5782 (3) | 0.0790 (2) | 0.21741 (18) | 0.0540 (5) | |
| H9A | 0.5446 | −0.0086 | 0.1652 | 0.065* | |
| H9B | 0.6926 | 0.1124 | 0.2336 | 0.065* | |
| C10 | 0.5522 (2) | 0.05584 (19) | 0.33498 (18) | 0.0516 (5) | |
| H10A | 0.6113 | −0.0104 | 0.3685 | 0.062* | |
| H10B | 0.4389 | 0.0163 | 0.3184 | 0.062* | |
| C11 | 0.6037 (2) | 0.18367 (19) | 0.42923 (16) | 0.0451 (4) | |
| H11A | 0.6223 | 0.1565 | 0.5081 | 0.054* | |
| H11B | 0.7046 | 0.2386 | 0.4285 | 0.054* | |
| C21 | 0.2814 (2) | 0.29636 (18) | 0.67846 (15) | 0.0416 (4) | |
| H21A | 0.3240 | 0.3740 | 0.7428 | 0.050* | |
| H21B | 0.3692 | 0.2540 | 0.6781 | 0.050* | |
| C22 | 0.15556 (19) | 0.19495 (16) | 0.70552 (14) | 0.0347 (3) | |
| C23 | 0.1853 (2) | 0.16979 (18) | 0.82224 (16) | 0.0449 (4) | |
| H23 | 0.2789 | 0.2189 | 0.8823 | 0.054* | |
| C24 | 0.0778 (3) | 0.0727 (2) | 0.85090 (19) | 0.0589 (5) | |
| H24 | 0.0996 | 0.0564 | 0.9298 | 0.071* | |
| C25 | −0.0605 (3) | 0.0004 (2) | 0.7635 (2) | 0.0629 (6) | |
| H25 | −0.1323 | −0.0658 | 0.7826 | 0.075* | |
| C26 | −0.0929 (2) | 0.0256 (2) | 0.6480 (2) | 0.0617 (5) | |
| H26 | −0.1877 | −0.0228 | 0.5886 | 0.074* | |
| C27 | 0.0142 (2) | 0.12280 (19) | 0.61870 (17) | 0.0503 (4) | |
| H27 | −0.0092 | 0.1396 | 0.5399 | 0.060* | |
| C31 | 0.28089 (17) | 0.49110 (15) | 0.19592 (14) | 0.0321 (3) | |
| C32 | 0.2876 (2) | 0.62890 (17) | 0.22518 (15) | 0.0396 (4) | |
| H32 | 0.3223 | 0.6683 | 0.3056 | 0.047* | |
| C33 | 0.2437 (2) | 0.70820 (18) | 0.13681 (17) | 0.0459 (4) | |
| H33 | 0.2491 | 0.8004 | 0.1574 | 0.055* | |
| C34 | 0.19207 (19) | 0.64947 (18) | 0.01821 (16) | 0.0428 (4) | |
| C35 | 0.1840 (2) | 0.51340 (19) | −0.01437 (16) | 0.0454 (4) | |
| H35 | 0.1493 | 0.4748 | −0.0950 | 0.055* | |
| C36 | 0.2284 (2) | 0.43515 (17) | 0.07516 (15) | 0.0395 (4) | |
| H36 | 0.2231 | 0.3430 | 0.0540 | 0.047* | |
| N1 | 0.0094 (2) | 0.51850 (19) | 0.36511 (16) | 0.0616 (5) | |
| N2 | 0.22527 (17) | 0.34558 (15) | 0.56572 (13) | 0.0425 (3) | |
| H2 | 0.1413 | 0.3786 | 0.5517 | 0.051* | |
| N3 | 0.41191 (15) | 0.27423 (13) | 0.49346 (11) | 0.0349 (3) | |
| Cl1 | 0.13087 (7) | 0.74901 (6) | −0.09170 (5) | 0.06667 (19) |
| C1 | 0.0457 (9) | 0.0481 (10) | 0.0398 (9) | 0.0242 (8) | 0.0226 (7) | 0.0144 (7) |
| C2 | 0.0336 (7) | 0.0323 (8) | 0.0369 (8) | 0.0132 (6) | 0.0151 (6) | 0.0062 (6) |
| C3 | 0.0315 (7) | 0.0271 (8) | 0.0337 (8) | 0.0084 (6) | 0.0118 (6) | 0.0038 (6) |
| C4 | 0.0294 (7) | 0.0317 (8) | 0.0382 (8) | 0.0096 (6) | 0.0141 (6) | 0.0050 (6) |
| C5 | 0.0307 (7) | 0.0328 (8) | 0.0362 (8) | 0.0110 (6) | 0.0104 (6) | 0.0028 (6) |
| C6 | 0.0328 (8) | 0.0297 (8) | 0.0369 (8) | 0.0093 (6) | 0.0153 (6) | 0.0047 (6) |
| C7 | 0.0368 (8) | 0.0452 (9) | 0.0472 (9) | 0.0170 (7) | 0.0224 (7) | 0.0144 (8) |
| C8 | 0.0523 (10) | 0.0567 (11) | 0.0441 (10) | 0.0229 (9) | 0.0246 (8) | 0.0062 (8) |
| C9 | 0.0662 (12) | 0.0486 (11) | 0.0619 (12) | 0.0279 (9) | 0.0335 (10) | 0.0071 (9) |
| C10 | 0.0646 (12) | 0.0436 (10) | 0.0629 (12) | 0.0302 (9) | 0.0318 (10) | 0.0148 (9) |
| C11 | 0.0454 (9) | 0.0549 (11) | 0.0453 (10) | 0.0294 (8) | 0.0172 (8) | 0.0146 (8) |
| C21 | 0.0435 (9) | 0.0471 (10) | 0.0368 (9) | 0.0101 (8) | 0.0168 (7) | 0.0088 (7) |
| C22 | 0.0398 (8) | 0.0331 (8) | 0.0381 (8) | 0.0154 (7) | 0.0184 (7) | 0.0066 (6) |
| C23 | 0.0513 (10) | 0.0473 (10) | 0.0398 (9) | 0.0150 (8) | 0.0171 (8) | 0.0111 (8) |
| C24 | 0.0745 (14) | 0.0608 (13) | 0.0570 (12) | 0.0228 (11) | 0.0345 (11) | 0.0288 (10) |
| C25 | 0.0589 (12) | 0.0536 (12) | 0.0923 (16) | 0.0156 (10) | 0.0404 (12) | 0.0339 (12) |
| C26 | 0.0479 (11) | 0.0535 (12) | 0.0764 (14) | 0.0035 (9) | 0.0144 (10) | 0.0156 (11) |
| C27 | 0.0498 (10) | 0.0527 (11) | 0.0455 (10) | 0.0092 (9) | 0.0127 (8) | 0.0119 (8) |
| C31 | 0.0298 (7) | 0.0341 (8) | 0.0386 (8) | 0.0116 (6) | 0.0167 (6) | 0.0094 (6) |
| C32 | 0.0413 (9) | 0.0368 (9) | 0.0408 (9) | 0.0121 (7) | 0.0123 (7) | 0.0060 (7) |
| C33 | 0.0460 (9) | 0.0332 (9) | 0.0594 (11) | 0.0111 (7) | 0.0164 (8) | 0.0136 (8) |
| C34 | 0.0384 (9) | 0.0483 (10) | 0.0500 (10) | 0.0146 (8) | 0.0195 (8) | 0.0240 (8) |
| C35 | 0.0499 (10) | 0.0558 (11) | 0.0370 (9) | 0.0171 (8) | 0.0196 (8) | 0.0115 (8) |
| C36 | 0.0457 (9) | 0.0380 (9) | 0.0416 (9) | 0.0158 (7) | 0.0206 (7) | 0.0072 (7) |
| N1 | 0.0655 (10) | 0.0839 (13) | 0.0638 (11) | 0.0493 (10) | 0.0377 (9) | 0.0285 (9) |
| N2 | 0.0472 (8) | 0.0511 (9) | 0.0466 (8) | 0.0259 (7) | 0.0281 (7) | 0.0202 (7) |
| N3 | 0.0366 (7) | 0.0351 (7) | 0.0366 (7) | 0.0145 (6) | 0.0135 (6) | 0.0072 (6) |
| Cl1 | 0.0687 (3) | 0.0744 (4) | 0.0699 (3) | 0.0251 (3) | 0.0271 (3) | 0.0466 (3) |
| C1—N1 | 1.140 (2) | C21—C22 | 1.505 (2) |
| C1—C2 | 1.428 (2) | C21—H21A | 0.9700 |
| C2—C3 | 1.403 (2) | C21—H21B | 0.9700 |
| C2—C6 | 1.408 (2) | C22—C27 | 1.378 (3) |
| C3—C4 | 1.398 (2) | C22—C23 | 1.381 (2) |
| C3—C31 | 1.489 (2) | C23—C24 | 1.380 (3) |
| C4—C5 | 1.399 (2) | C23—H23 | 0.9300 |
| C4—C7 | 1.508 (2) | C24—C25 | 1.366 (3) |
| C5—N3 | 1.337 (2) | C24—H24 | 0.9300 |
| C5—C11 | 1.505 (2) | C25—C26 | 1.366 (3) |
| C6—N3 | 1.340 (2) | C25—H25 | 0.9300 |
| C6—N2 | 1.354 (2) | C26—C27 | 1.382 (3) |
| C7—C8 | 1.529 (3) | C26—H26 | 0.9300 |
| C7—H7A | 0.9700 | C27—H27 | 0.9300 |
| C7—H7B | 0.9700 | C31—C36 | 1.388 (2) |
| C8—C9 | 1.520 (3) | C31—C32 | 1.389 (2) |
| C8—H8A | 0.9700 | C32—C33 | 1.380 (2) |
| C8—H8B | 0.9700 | C32—H32 | 0.9300 |
| C9—C10 | 1.513 (3) | C33—C34 | 1.373 (3) |
| C9—H9A | 0.9700 | C33—H33 | 0.9300 |
| C9—H9B | 0.9700 | C34—C35 | 1.376 (3) |
| C10—C11 | 1.524 (3) | C34—Cl1 | 1.7334 (17) |
| C10—H10A | 0.9700 | C35—C36 | 1.383 (2) |
| C10—H10B | 0.9700 | C35—H35 | 0.9300 |
| C11—H11A | 0.9700 | C36—H36 | 0.9300 |
| C11—H11B | 0.9700 | N2—H2 | 0.8600 |
| C21—N2 | 1.442 (2) | ||
| N1—C1—C2 | 174.73 (18) | N2—C21—C22 | 114.79 (14) |
| C3—C2—C6 | 120.15 (13) | N2—C21—H21A | 108.6 |
| C3—C2—C1 | 122.07 (14) | C22—C21—H21A | 108.6 |
| C6—C2—C1 | 117.73 (14) | N2—C21—H21B | 108.6 |
| C4—C3—C2 | 118.39 (14) | C22—C21—H21B | 108.6 |
| C4—C3—C31 | 123.49 (13) | H21A—C21—H21B | 107.5 |
| C2—C3—C31 | 118.06 (13) | C27—C22—C23 | 118.37 (16) |
| C3—C4—C5 | 117.26 (13) | C27—C22—C21 | 123.14 (15) |
| C3—C4—C7 | 123.47 (14) | C23—C22—C21 | 118.46 (15) |
| C5—C4—C7 | 119.26 (13) | C24—C23—C22 | 120.88 (18) |
| N3—C5—C4 | 124.52 (14) | C24—C23—H23 | 119.6 |
| N3—C5—C11 | 114.38 (14) | C22—C23—H23 | 119.6 |
| C4—C5—C11 | 121.08 (14) | C25—C24—C23 | 120.05 (19) |
| N3—C6—N2 | 118.13 (14) | C25—C24—H24 | 120.0 |
| N3—C6—C2 | 120.89 (13) | C23—C24—H24 | 120.0 |
| N2—C6—C2 | 120.98 (13) | C24—C25—C26 | 119.80 (19) |
| C4—C7—C8 | 113.51 (14) | C24—C25—H25 | 120.1 |
| C4—C7—H7A | 108.9 | C26—C25—H25 | 120.1 |
| C8—C7—H7A | 108.9 | C25—C26—C27 | 120.40 (19) |
| C4—C7—H7B | 108.9 | C25—C26—H26 | 119.8 |
| C8—C7—H7B | 108.9 | C27—C26—H26 | 119.8 |
| H7A—C7—H7B | 107.7 | C22—C27—C26 | 120.48 (18) |
| C9—C8—C7 | 114.77 (15) | C22—C27—H27 | 119.8 |
| C9—C8—H8A | 108.6 | C26—C27—H27 | 119.8 |
| C7—C8—H8A | 108.6 | C36—C31—C32 | 118.14 (14) |
| C9—C8—H8B | 108.6 | C36—C31—C3 | 122.71 (14) |
| C7—C8—H8B | 108.6 | C32—C31—C3 | 119.13 (14) |
| H8A—C8—H8B | 107.6 | C33—C32—C31 | 121.05 (16) |
| C10—C9—C8 | 116.06 (15) | C33—C32—H32 | 119.5 |
| C10—C9—H9A | 108.3 | C31—C32—H32 | 119.5 |
| C8—C9—H9A | 108.3 | C34—C33—C32 | 119.28 (16) |
| C10—C9—H9B | 108.3 | C34—C33—H33 | 120.4 |
| C8—C9—H9B | 108.3 | C32—C33—H33 | 120.4 |
| H9A—C9—H9B | 107.4 | C33—C34—C35 | 121.39 (16) |
| C9—C10—C11 | 115.01 (16) | C33—C34—Cl1 | 118.72 (14) |
| C9—C10—H10A | 108.5 | C35—C34—Cl1 | 119.86 (14) |
| C11—C10—H10A | 108.5 | C34—C35—C36 | 118.70 (16) |
| C9—C10—H10B | 108.5 | C34—C35—H35 | 120.6 |
| C11—C10—H10B | 108.5 | C36—C35—H35 | 120.6 |
| H10A—C10—H10B | 107.5 | C35—C36—C31 | 121.43 (16) |
| C5—C11—C10 | 113.24 (15) | C35—C36—H36 | 119.3 |
| C5—C11—H11A | 108.9 | C31—C36—H36 | 119.3 |
| C10—C11—H11A | 108.9 | C6—N2—C21 | 124.26 (14) |
| C5—C11—H11B | 108.9 | C6—N2—H2 | 117.9 |
| C10—C11—H11B | 108.9 | C21—N2—H2 | 117.9 |
| H11A—C11—H11B | 107.7 | C5—N3—C6 | 118.73 (13) |
| H··· | ||||
| N2—H2···N1i | 0.86 | 2.26 | 3.007 (2) | 145 |